RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 TOPAZ1Q8N9V7 1692 aa17.72■□□□□ 0.43
GPNMB-214ENST00000492858 SBF2Q86WG5 1849 aa17.71■□□□□ 0.43
GPNMB-214ENST00000492858 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
GPNMB-214ENST00000492858 TOM1L2Q6ZVM7 507 aa17.71■□□□□ 0.43
GPNMB-214ENST00000492858 MARCH10Q8NA82 808 aaPredicted RBP17.71■□□□□ 0.43
GPNMB-214ENST00000492858 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
GPNMB-214ENST00000492858 MTFR1LQ9H019 292 aa17.7■□□□□ 0.42
GPNMB-214ENST00000492858 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
GPNMB-214ENST00000492858 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
GPNMB-214ENST00000492858 SGIP1Q9BQI5 828 aa17.68■□□□□ 0.42
GPNMB-214ENST00000492858 BCL9O00512 1426 aa17.67■□□□□ 0.42
GPNMB-214ENST00000492858 NLRP6P59044 892 aa17.66■□□□□ 0.42
GPNMB-214ENST00000492858 ARXQ96QS3 562 aa17.66■□□□□ 0.42
GPNMB-214ENST00000492858 PPIP5K1Q6PFW1 1433 aa17.65■□□□□ 0.42
GPNMB-214ENST00000492858 CDCA7Q9BWT1 371 aaPredicted RBP17.65■□□□□ 0.42
GPNMB-214ENST00000492858 WDR17Q8IZU2 1322 aa17.65■□□□□ 0.42
GPNMB-214ENST00000492858 CHD4Q14839 1912 aa17.64■□□□□ 0.42
GPNMB-214ENST00000492858 SRPK2P78362 688 aaKnown RBP17.64■□□□□ 0.41
GPNMB-214ENST00000492858 AXIN2Q9Y2T1 843 aa17.64■□□□□ 0.41
GPNMB-214ENST00000492858 GIGYF1O75420 1035 aaPredicted RBP17.63■□□□□ 0.41
GPNMB-214ENST00000492858 GPR162Q16538 588 aa17.63■□□□□ 0.41
GPNMB-214ENST00000492858 SLIT3O75094 1523 aa17.62■□□□□ 0.41
GPNMB-214ENST00000492858 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
GPNMB-214ENST00000492858 MAP3K5Q99683 1374 aa17.62■□□□□ 0.41
GPNMB-214ENST00000492858 CABP2Q9NPB3 220 aa17.61■□□□□ 0.41
GPNMB-214ENST00000492858 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
GPNMB-214ENST00000492858 EXOC5O00471 708 aa17.6■□□□□ 0.41
GPNMB-214ENST00000492858 CSB-PGBD3P0DP91 1061 aa17.6■□□□□ 0.41
GPNMB-214ENST00000492858 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
GPNMB-214ENST00000492858 USP6P35125 1406 aa17.6■□□□□ 0.41
GPNMB-214ENST00000492858 WNK3Q9BYP7 1800 aa17.6■□□□□ 0.41
GPNMB-214ENST00000492858 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
GPNMB-214ENST00000492858 COL18A1P39060 1754 aa17.58■□□□□ 0.41
GPNMB-214ENST00000492858 CPSF1Q10570 1443 aaKnown RBP17.58■□□□□ 0.41
GPNMB-214ENST00000492858 CABP1Q9NZU7 370 aa17.58■□□□□ 0.4
GPNMB-214ENST00000492858 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
GPNMB-214ENST00000492858 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
GPNMB-214ENST00000492858 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
GPNMB-214ENST00000492858 ACSBG1Q96GR2 724 aa17.57■□□□□ 0.4
GPNMB-214ENST00000492858 TNS2Q63HR2 1409 aa17.56■□□□□ 0.4
GPNMB-214ENST00000492858 SOX12O15370 315 aa17.56■□□□□ 0.4
GPNMB-214ENST00000492858 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
GPNMB-214ENST00000492858 PIK3C2AO00443 1686 aa17.55■□□□□ 0.4
GPNMB-214ENST00000492858 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
GPNMB-214ENST00000492858 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
GPNMB-214ENST00000492858 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
GPNMB-214ENST00000492858 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
GPNMB-214ENST00000492858 NHSQ6T4R5 1651 aa17.53■□□□□ 0.4
GPNMB-214ENST00000492858 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
GPNMB-214ENST00000492858 POLD1P28340 1107 aa17.51■□□□□ 0.39
GPNMB-214ENST00000492858 LRRC4BQ9NT99 713 aa17.51■□□□□ 0.39
GPNMB-214ENST00000492858 SLC16A10Q8TF71 515 aa17.5■□□□□ 0.39
GPNMB-214ENST00000492858 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
GPNMB-214ENST00000492858 SHANK3Q9BYB0 1731 aa17.5■□□□□ 0.39
GPNMB-214ENST00000492858 TTC21BQ7Z4L5 1316 aa17.49■□□□□ 0.39
GPNMB-214ENST00000492858 NLGN2Q8NFZ4 835 aa17.49■□□□□ 0.39
GPNMB-214ENST00000492858 KIAA1210Q9ULL0 1709 aa17.49■□□□□ 0.39
GPNMB-214ENST00000492858 RGPD5Q99666 1765 aa17.48■□□□□ 0.39
GPNMB-214ENST00000492858 ABCC6O95255 1503 aa17.48■□□□□ 0.39
GPNMB-214ENST00000492858 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
GPNMB-214ENST00000492858 AKT1S1Q96B36 256 aa17.47■□□□□ 0.39
GPNMB-214ENST00000492858 NFAT5O94916 1531 aa17.47■□□□□ 0.39
GPNMB-214ENST00000492858 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
GPNMB-214ENST00000492858 BTAF1O14981 1849 aa17.45■□□□□ 0.38
GPNMB-214ENST00000492858 IL2RBP14784 551 aa17.45■□□□□ 0.38
GPNMB-214ENST00000492858 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
GPNMB-214ENST00000492858 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
GPNMB-214ENST00000492858 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
GPNMB-214ENST00000492858 GRIN3BO60391 1043 aa17.44■□□□□ 0.38
GPNMB-214ENST00000492858 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
GPNMB-214ENST00000492858 SLC27A3Q5K4L6 730 aa17.44■□□□□ 0.38
GPNMB-214ENST00000492858 ERBB3P21860 1342 aa17.44■□□□□ 0.38
GPNMB-214ENST00000492858 TFCP2L1Q9NZI6 479 aa17.43■□□□□ 0.38
GPNMB-214ENST00000492858 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
GPNMB-214ENST00000492858 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
GPNMB-214ENST00000492858 KCNQ4P56696 695 aa17.41■□□□□ 0.38
GPNMB-214ENST00000492858 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
GPNMB-214ENST00000492858 COL24A1Q17RW2 1714 aa17.38■□□□□ 0.37
GPNMB-214ENST00000492858 QSER1Q2KHR3 1735 aa17.38■□□□□ 0.37
GPNMB-214ENST00000492858 HSPA6P17066 643 aa17.38■□□□□ 0.37
GPNMB-214ENST00000492858 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
GPNMB-214ENST00000492858 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
GPNMB-214ENST00000492858 GPBP1L1Q9HC44 474 aaPredicted RBP17.38■□□□□ 0.37
GPNMB-214ENST00000492858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.37■□□□□ 0.37
GPNMB-214ENST00000492858 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
GPNMB-214ENST00000492858 MSH5O43196 834 aa17.36■□□□□ 0.37
GPNMB-214ENST00000492858 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
GPNMB-214ENST00000492858 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
GPNMB-214ENST00000492858 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
GPNMB-214ENST00000492858 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
GPNMB-214ENST00000492858 MSL1Q68DK7 614 aa17.34■□□□□ 0.37
GPNMB-214ENST00000492858 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
GPNMB-214ENST00000492858 NME9Q86XW9 330 aa17.32■□□□□ 0.36
GPNMB-214ENST00000492858 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
GPNMB-214ENST00000492858 ADCY9O60503 1353 aa17.31■□□□□ 0.36
GPNMB-214ENST00000492858 ANKRD36BQ8N2N9 1353 aa17.31■□□□□ 0.36
GPNMB-214ENST00000492858 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
GPNMB-214ENST00000492858 NSD2O96028 1365 aa17.29■□□□□ 0.36
GPNMB-214ENST00000492858 CD2APQ9Y5K6 639 aa17.29■□□□□ 0.36
GPNMB-214ENST00000492858 LTN1O94822 1766 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms