RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TSC1Q92574 1164 aa6.89□□□□□ -1.31
HMGB1P30-201ENST00000492455 BEGAINQ9BUH8 593 aa6.89□□□□□ -1.31
HMGB1P30-201ENST00000492455 C1QTNF2Q9BXJ5 285 aa6.89□□□□□ -1.31
HMGB1P30-201ENST00000492455 PHF20L1A8MW92 1017 aa6.88□□□□□ -1.31
HMGB1P30-201ENST00000492455 SPINT1O43278 529 aa6.88□□□□□ -1.31
HMGB1P30-201ENST00000492455 PRKCSHP14314 528 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P30-201ENST00000492455 TRMT44Q8IYL2 757 aaKnown RBP6.88□□□□□ -1.31
HMGB1P30-201ENST00000492455 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
HMGB1P30-201ENST00000492455 SLC35F4A4IF30 521 aa6.87□□□□□ -1.31
HMGB1P30-201ENST00000492455 ADAMTS2O95450 1211 aa6.87□□□□□ -1.31
HMGB1P30-201ENST00000492455 HRCP23327 699 aa6.87□□□□□ -1.31
HMGB1P30-201ENST00000492455 PRPF38BQ5VTL8 546 aaKnown RBP6.87□□□□□ -1.31
HMGB1P30-201ENST00000492455 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P30-201ENST00000492455 GIGYF2Q6Y7W6 1299 aaKnown RBP6.86□□□□□ -1.31
HMGB1P30-201ENST00000492455 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
HMGB1P30-201ENST00000492455 GALNT6Q8NCL4 622 aa6.86□□□□□ -1.31
HMGB1P30-201ENST00000492455 ADAM23O75077 832 aa6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 SRSF11Q05519 484 aaKnown RBP6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 Q6ZVU0 165 aa6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 SH3RF1Q7Z6J0 888 aa6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 CARD14Q9BXL6 1004 aa6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 POLMQ9NP87 494 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 PCDHB15Q9Y5E8 787 aa6.85□□□□□ -1.31
HMGB1P30-201ENST00000492455 NUTM2BA6NNL0 878 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P30-201ENST00000492455 NUTM2EB1AL46 878 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P30-201ENST00000492455 CBLBQ13191 982 aa6.84□□□□□ -1.31
HMGB1P30-201ENST00000492455 NUTM2DQ5VT03 806 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P30-201ENST00000492455 NUTM2AQ8IVF1 878 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P30-201ENST00000492455 AMHR2Q16671 573 aa6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 CSPP1Q1MSJ5 1256 aa6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 PLA2G4EQ3MJ16 856 aa6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 LYPD4Q6UWN0 246 aa6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 SH3BP5LQ7L8J4 393 aa6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 RIC3Q7Z5B4 369 aa6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 GPKOWQ92917 476 aaPredicted RBP eCLIP6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 CDV3Q9UKY7 258 aaKnown RBP6.83□□□□□ -1.32
HMGB1P30-201ENST00000492455 PER1O15534 1290 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P30-201ENST00000492455 TPRNQ4KMQ1 711 aa6.82□□□□□ -1.32
HMGB1P30-201ENST00000492455 BEND7Q8N7W2 519 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P30-201ENST00000492455 CABLES1Q8TDN4 633 aa6.82□□□□□ -1.32
HMGB1P30-201ENST00000492455 SLC10A4Q96EP9 437 aa6.82□□□□□ -1.32
HMGB1P30-201ENST00000492455 SPOCK3Q9BQ16 436 aa6.82□□□□□ -1.32
HMGB1P30-201ENST00000492455 CELA2BP08218 269 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P30-201ENST00000492455 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P30-201ENST00000492455 RELBQ01201 579 aa6.81□□□□□ -1.32
HMGB1P30-201ENST00000492455 FOXR1Q6PIV2 292 aa6.81□□□□□ -1.32
HMGB1P30-201ENST00000492455 NEDD1Q8NHV4 660 aa6.81□□□□□ -1.32
HMGB1P30-201ENST00000492455 INSM2Q96T92 566 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P30-201ENST00000492455 ERFEQ4G0M1 354 aa6.8□□□□□ -1.32
HMGB1P30-201ENST00000492455 DCAF5Q96JK2 942 aa6.8□□□□□ -1.32
HMGB1P30-201ENST00000492455 AGBL1Q96MI9 1066 aa6.79□□□□□ -1.32
HMGB1P30-201ENST00000492455 KCTD15Q96SI1 283 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P30-201ENST00000492455 K7ELQ4 463 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P30-201ENST00000492455 RNF217Q8TC41 542 aa6.78□□□□□ -1.32
HMGB1P30-201ENST00000492455 ARHGAP9Q9BRR9 750 aa6.78□□□□□ -1.32
HMGB1P30-201ENST00000492455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGB1P30-201ENST00000492455 ZBTB33Q86T24 672 aa6.77□□□□□ -1.33
HMGB1P30-201ENST00000492455 MBIPQ9NS73 344 aa6.77□□□□□ -1.33
HMGB1P30-201ENST00000492455 CNTNAP5Q8WYK1 1306 aa6.76□□□□□ -1.33
HMGB1P30-201ENST00000492455 GMCL1Q96IK5 515 aa6.76□□□□□ -1.33
HMGB1P30-201ENST00000492455 ZNF395Q9H8N7 513 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P30-201ENST00000492455 SENP3-EIF4A1A0A087X0R7 540 aa6.75□□□□□ -1.33
HMGB1P30-201ENST00000492455 BCRP11274 1271 aa6.75□□□□□ -1.33
HMGB1P30-201ENST00000492455 LYSMD3Q7Z3D4 306 aa6.75□□□□□ -1.33
HMGB1P30-201ENST00000492455 TRIM52Q96A61 297 aa6.75□□□□□ -1.33
HMGB1P30-201ENST00000492455 GAS6Q14393 721 aa6.74□□□□□ -1.33
HMGB1P30-201ENST00000492455 PDXDC2PQ6P474 469 aa6.74□□□□□ -1.33
HMGB1P30-201ENST00000492455 BARGINQ6ZT62 677 aa6.74□□□□□ -1.33
HMGB1P30-201ENST00000492455 NSFL1CQ9UNZ2 370 aaKnown RBP6.74□□□□□ -1.33
HMGB1P30-201ENST00000492455 IGF1RP08069 1367 aa6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 PROCP04070 461 aa6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 QPCTQ16769 361 aa6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 TUSC1Q2TAM9 212 aa6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 NBPF20Q3BBV1 942 aa6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 INTS6LQ5JSJ4 861 aaKnown RBP6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 PARP9Q8IXQ6 854 aa6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 TRERF1Q96PN7 1200 aa6.73□□□□□ -1.33
HMGB1P30-201ENST00000492455 LILRB3O75022 631 aa6.72□□□□□ -1.33
HMGB1P30-201ENST00000492455 ADH1AP07327 375 aa6.72□□□□□ -1.33
HMGB1P30-201ENST00000492455 RIPOR1Q6ZS17 1223 aa6.72□□□□□ -1.33
HMGB1P30-201ENST00000492455 TRIM22Q8IYM9 498 aa6.72□□□□□ -1.33
HMGB1P30-201ENST00000492455 PTK2Q05397 1052 aa6.71□□□□□ -1.34
HMGB1P30-201ENST00000492455 LRRC4BQ9NT99 713 aa6.71□□□□□ -1.34
HMGB1P30-201ENST00000492455 LIMD1Q9UGP4 676 aa6.71□□□□□ -1.34
HMGB1P30-201ENST00000492455 FKBPLQ9UIM3 349 aa6.71□□□□□ -1.34
HMGB1P30-201ENST00000492455 ZC3H4Q9UPT8 1303 aaKnown RBP6.71□□□□□ -1.34
HMGB1P30-201ENST00000492455 H7C1W4 665 aa6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 ZMYND10O75800 440 aa6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 PTGIRP43119 386 aa6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 RAB15P59190 212 aa6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 FOXD4L5Q5VV16 416 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 MYSM1Q5VVJ2 828 aa6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 Q8N3U1 123 aa6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 ZNF837Q96EG3 531 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 CUEDC1Q9NWM3 386 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P30-201ENST00000492455 GPR25O00155 361 aa6.69□□□□□ -1.34
HMGB1P30-201ENST00000492455 BAG6P46379 1132 aa6.69□□□□□ -1.34
HMGB1P30-201ENST00000492455 PRICKLE2Q7Z3G6 844 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms