RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 GGNBP2Q9H3C7 697 aa24.57■■□□□ 1.52
LMNB1-206ENST00000492190 KIF7Q2M1P5 1343 aa24.57■■□□□ 1.52
LMNB1-206ENST00000492190 ONECUT3O60422 494 aaPredicted RBP24.56■■□□□ 1.52
LMNB1-206ENST00000492190 LARP1Q6PKG0 1096 aaKnown RBP24.56■■□□□ 1.52
LMNB1-206ENST00000492190 COG3Q96JB2 828 aa24.55■■□□□ 1.52
LMNB1-206ENST00000492190 THSD7AQ9UPZ6 1657 aa24.55■■□□□ 1.52
LMNB1-206ENST00000492190 SPATA31A1Q5TZJ5 1347 aa24.55■■□□□ 1.52
LMNB1-206ENST00000492190 ABCC6O95255 1503 aa24.55■■□□□ 1.52
LMNB1-206ENST00000492190 FBLN1P23142 703 aa24.54■■□□□ 1.52
LMNB1-206ENST00000492190 EVA1CP58658 441 aa24.53■■□□□ 1.52
LMNB1-206ENST00000492190 FAM98CQ17RN3 349 aaKnown RBP24.53■■□□□ 1.52
LMNB1-206ENST00000492190 ANKRD26Q9UPS8 1709 aa24.52■■□□□ 1.52
LMNB1-206ENST00000492190 SEPT12Q8IYM1 358 aa24.52■■□□□ 1.52
LMNB1-206ENST00000492190 PANK3Q9H999 370 aa24.52■■□□□ 1.52
LMNB1-206ENST00000492190 WNK3Q9BYP7 1800 aa24.49■■□□□ 1.51
LMNB1-206ENST00000492190 MAP2P11137 1827 aaKnown RBP24.49■■□□□ 1.51
LMNB1-206ENST00000492190 CRB1P82279 1406 aa24.48■■□□□ 1.51
LMNB1-206ENST00000492190 USP35Q9P2H5 1018 aa24.48■■□□□ 1.51
LMNB1-206ENST00000492190 CCDC7Q96M83 1385 aa24.47■■□□□ 1.51
LMNB1-206ENST00000492190 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
LMNB1-206ENST00000492190 MAP3K19Q56UN5 1328 aa24.46■■□□□ 1.51
LMNB1-206ENST00000492190 WASHC2AQ641Q2 1341 aa24.46■■□□□ 1.51
LMNB1-206ENST00000492190 WDR17Q8IZU2 1322 aa24.46■■□□□ 1.51
LMNB1-206ENST00000492190 RGPD2P0DJD1 1756 aa24.46■■□□□ 1.51
LMNB1-206ENST00000492190 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.5
LMNB1-206ENST00000492190 UPF1Q92900 1129 aaKnown RBP eCLIP24.45■■□□□ 1.5
LMNB1-206ENST00000492190 PARP4Q9UKK3 1724 aaKnown RBP24.44■■□□□ 1.5
LMNB1-206ENST00000492190 RRS1Q15050 365 aaKnown RBP24.43■■□□□ 1.5
LMNB1-206ENST00000492190 BARGINQ6ZT62 677 aa24.43■■□□□ 1.5
LMNB1-206ENST00000492190 TCP11L2Q8N4U5 519 aa24.43■■□□□ 1.5
LMNB1-206ENST00000492190 IP6K1Q92551 441 aa24.43■■□□□ 1.5
LMNB1-206ENST00000492190 A0A0G2JS52 829 aa24.42■■□□□ 1.5
LMNB1-206ENST00000492190 MYT1Q01538 1121 aa24.42■■□□□ 1.5
LMNB1-206ENST00000492190 TOM1L2Q6ZVM7 507 aa24.42■■□□□ 1.5
LMNB1-206ENST00000492190 ERBB3P21860 1342 aa24.41■■□□□ 1.5
LMNB1-206ENST00000492190 HOXC9P31274 260 aa24.4■■□□□ 1.5
LMNB1-206ENST00000492190 KRT27Q7Z3Y8 459 aa24.4■■□□□ 1.5
LMNB1-206ENST00000492190 BLMP54132 1417 aaPredicted RBP24.4■■□□□ 1.5
LMNB1-206ENST00000492190 FAM208AQ9UK61 1670 aaKnown RBP24.4■■□□□ 1.5
LMNB1-206ENST00000492190 CSB-PGBD3P0DP91 1061 aa24.39■■□□□ 1.49
LMNB1-206ENST00000492190 ANKRD24Q8TF21 1146 aa24.39■■□□□ 1.49
LMNB1-206ENST00000492190 THRAP3Q9Y2W1 955 aaKnown RBP24.39■■□□□ 1.49
LMNB1-206ENST00000492190 CARD10Q9BWT7 1032 aa24.38■■□□□ 1.49
LMNB1-206ENST00000492190 LRRC37A3O60309 1634 aa24.38■■□□□ 1.49
LMNB1-206ENST00000492190 AMPHP49418 695 aa24.37■■□□□ 1.49
LMNB1-206ENST00000492190 RTL1A6NKG5 1358 aa24.37■■□□□ 1.49
LMNB1-206ENST00000492190 PER1O15534 1290 aaPredicted RBP24.36■■□□□ 1.49
LMNB1-206ENST00000492190 FAM182BQ5T319 152 aa24.35■■□□□ 1.49
LMNB1-206ENST00000492190 EMILIN1Q9Y6C2 1016 aa24.35■■□□□ 1.49
LMNB1-206ENST00000492190 DISP2A7MBM2 1401 aa24.35■■□□□ 1.49
LMNB1-206ENST00000492190 AMER1Q5JTC6 1135 aaPredicted RBP24.34■■□□□ 1.49
LMNB1-206ENST00000492190 LTV1Q96GA3 475 aaPredicted RBP24.34■■□□□ 1.49
LMNB1-206ENST00000492190 KNSTRNQ9Y448 316 aa24.34■■□□□ 1.49
LMNB1-206ENST00000492190 NSD2O96028 1365 aa24.33■■□□□ 1.49
LMNB1-206ENST00000492190 NLRP2Q9NX02 1062 aa24.33■■□□□ 1.49
LMNB1-206ENST00000492190 HSP90AB2PQ58FF8 381 aa24.32■■□□□ 1.48
LMNB1-206ENST00000492190 FLT4P35916 1363 aa24.31■■□□□ 1.48
LMNB1-206ENST00000492190 TNNT2P45379 298 aaPredicted RBP24.31■■□□□ 1.48
LMNB1-206ENST00000492190 KIF24Q5T7B8 1368 aa24.3■■□□□ 1.48
LMNB1-206ENST00000492190 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
LMNB1-206ENST00000492190 INSRP06213 1382 aa24.29■■□□□ 1.48
LMNB1-206ENST00000492190 SBF2Q86WG5 1849 aa24.29■■□□□ 1.48
LMNB1-206ENST00000492190 MORC1Q86VD1 984 aa24.26■■□□□ 1.47
LMNB1-206ENST00000492190 RGPD1P0DJD0 1748 aa24.26■■□□□ 1.47
LMNB1-206ENST00000492190 TNS1Q9HBL0 1735 aaKnown RBP24.26■■□□□ 1.47
LMNB1-206ENST00000492190 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
LMNB1-206ENST00000492190 PDE3BQ13370 1112 aa24.25■■□□□ 1.47
LMNB1-206ENST00000492190 DDB1Q16531 1140 aa24.25■■□□□ 1.47
LMNB1-206ENST00000492190 NBPF6Q5VWK0 638 aa24.25■■□□□ 1.47
LMNB1-206ENST00000492190 NBPF4Q96M43 638 aa24.25■■□□□ 1.47
LMNB1-206ENST00000492190 CDCA7Q9BWT1 371 aaPredicted RBP24.25■■□□□ 1.47
LMNB1-206ENST00000492190 SMG6Q86US8 1419 aaKnown RBP24.24■■□□□ 1.47
LMNB1-206ENST00000492190 SHANK3Q9BYB0 1731 aa24.23■■□□□ 1.47
LMNB1-206ENST00000492190 KAT6BQ8WYB5 2073 aa24.23■■□□□ 1.47
LMNB1-206ENST00000492190 TNS2Q63HR2 1409 aa24.21■■□□□ 1.47
LMNB1-206ENST00000492190 IL2RBP14784 551 aa24.21■■□□□ 1.47
LMNB1-206ENST00000492190 CC2D1BQ5T0F9 858 aaKnown RBP24.21■■□□□ 1.47
LMNB1-206ENST00000492190 CCDC125Q86Z20 511 aa24.21■■□□□ 1.47
LMNB1-206ENST00000492190 USHBP1Q8N6Y0 703 aa24.21■■□□□ 1.47
LMNB1-206ENST00000492190 MARCH10Q8NA82 808 aaPredicted RBP24.21■■□□□ 1.47
LMNB1-206ENST00000492190 NPC1L1Q9UHC9 1359 aa24.2■■□□□ 1.46
LMNB1-206ENST00000492190 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
LMNB1-206ENST00000492190 FAM196AQ6ZSG2 479 aa24.2■■□□□ 1.46
LMNB1-206ENST00000492190 MEGF6O75095 1541 aa24.2■■□□□ 1.46
LMNB1-206ENST00000492190 EXOC5O00471 708 aa24.18■■□□□ 1.46
LMNB1-206ENST00000492190 OVOS2A0A0G2JMS6 1433 aa24.18■■□□□ 1.46
LMNB1-206ENST00000492190 NCAPD2Q15021 1401 aa24.18■■□□□ 1.46
LMNB1-206ENST00000492190 CNGB1Q14028 1251 aaPredicted RBP24.16■■□□□ 1.46
LMNB1-206ENST00000492190 DEFB132Q7Z7B7 95 aa24.16■■□□□ 1.46
LMNB1-206ENST00000492190 TRIM37O94972 964 aa24.15■■□□□ 1.46
LMNB1-206ENST00000492190 EIF4A2Q14240 407 aaKnown RBP24.15■■□□□ 1.46
LMNB1-206ENST00000492190 EYA1Q99502 592 aa24.14■■□□□ 1.45
LMNB1-206ENST00000492190 BCL9O00512 1426 aa24.12■■□□□ 1.45
LMNB1-206ENST00000492190 PKD1L3Q7Z443 1732 aa24.11■■□□□ 1.45
LMNB1-206ENST00000492190 SF3B2Q13435 895 aaKnown RBP24.1■■□□□ 1.45
LMNB1-206ENST00000492190 PTF1AQ7RTS3 328 aa24.1■■□□□ 1.45
LMNB1-206ENST00000492190 MTHFSP49914 203 aa24.09■■□□□ 1.45
LMNB1-206ENST00000492190 NHSQ6T4R5 1651 aa24.08■■□□□ 1.45
LMNB1-206ENST00000492190 ZCRB1Q8TBF4 217 aaKnown RBP24.07■■□□□ 1.44
LMNB1-206ENST00000492190 RAPGEF4Q8WZA2 1011 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms