RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 PHLPP1O60346 1717 aa14.36□□□□□ -0.11
ATF3-209ENST00000492118 TMEM132AQ24JP5 1023 aa14.36□□□□□ -0.11
ATF3-209ENST00000492118 NHSL1Q5SYE7 1610 aa14.36□□□□□ -0.11
ATF3-209ENST00000492118 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
ATF3-209ENST00000492118 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
ATF3-209ENST00000492118 ARHGEF10O15013 1369 aa14.35□□□□□ -0.11
ATF3-209ENST00000492118 MED1Q15648 1581 aaPredicted RBP14.35□□□□□ -0.11
ATF3-209ENST00000492118 KCNH5Q8NCM2 988 aa14.35□□□□□ -0.11
ATF3-209ENST00000492118 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
ATF3-209ENST00000492118 ADAMTS2O95450 1211 aa14.34□□□□□ -0.11
ATF3-209ENST00000492118 HMOX1P09601 288 aa14.34□□□□□ -0.11
ATF3-209ENST00000492118 HSPA1LP34931 641 aa14.34□□□□□ -0.11
ATF3-209ENST00000492118 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATF3-209ENST00000492118 AATKQ6ZMQ8 1374 aa14.34□□□□□ -0.11
ATF3-209ENST00000492118 AXIN2Q9Y2T1 843 aa14.33□□□□□ -0.11
ATF3-209ENST00000492118 PEAK1Q9H792 1746 aa14.33□□□□□ -0.11
ATF3-209ENST00000492118 USP19O94966 1318 aa14.33□□□□□ -0.12
ATF3-209ENST00000492118 HOXC9P31274 260 aa14.33□□□□□ -0.12
ATF3-209ENST00000492118 KIAA0232Q92628 1395 aa14.33□□□□□ -0.12
ATF3-209ENST00000492118 LTN1O94822 1766 aa14.33□□□□□ -0.12
ATF3-209ENST00000492118 EIF4A2Q14240 407 aaKnown RBP14.32□□□□□ -0.12
ATF3-209ENST00000492118 PRDM11Q9NQV5 511 aa14.32□□□□□ -0.12
ATF3-209ENST00000492118 ARHGEF25Q86VW2 580 aa14.32□□□□□ -0.12
ATF3-209ENST00000492118 USHBP1Q8N6Y0 703 aa14.32□□□□□ -0.12
ATF3-209ENST00000492118 NFAT5O94916 1531 aa14.31□□□□□ -0.12
ATF3-209ENST00000492118 AHDC1Q5TGY3 1603 aaPredicted RBP14.31□□□□□ -0.12
ATF3-209ENST00000492118 FLT4P35916 1363 aa14.3□□□□□ -0.12
ATF3-209ENST00000492118 NUDCQ9Y266 331 aa14.3□□□□□ -0.12
ATF3-209ENST00000492118 NEFLP07196 543 aa14.3□□□□□ -0.12
ATF3-209ENST00000492118 PDE4CQ08493 712 aa14.3□□□□□ -0.12
ATF3-209ENST00000492118 NEUROD2Q15784 382 aa14.3□□□□□ -0.12
ATF3-209ENST00000492118 PNPLA6Q8IY17 1366 aa14.29□□□□□ -0.12
ATF3-209ENST00000492118 COL16A1Q07092 1604 aaPredicted RBP14.29□□□□□ -0.12
ATF3-209ENST00000492118 IL13P35225 146 aa14.29□□□□□ -0.12
ATF3-209ENST00000492118 AEBP1Q8IUX7 1158 aa14.29□□□□□ -0.12
ATF3-209ENST00000492118 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
ATF3-209ENST00000492118 PHRF1Q9P1Y6 1649 aaKnown RBP14.29□□□□□ -0.12
ATF3-209ENST00000492118 SLIT3O75094 1523 aa14.29□□□□□ -0.12
ATF3-209ENST00000492118 IP6K1Q92551 441 aa14.29□□□□□ -0.12
ATF3-209ENST00000492118 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
ATF3-209ENST00000492118 COL3A1P02461 1466 aaPredicted RBP14.28□□□□□ -0.12
ATF3-209ENST00000492118 CDK12Q9NYV4 1490 aaPredicted RBP14.28□□□□□ -0.12
ATF3-209ENST00000492118 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
ATF3-209ENST00000492118 RGPD5Q99666 1765 aa14.28□□□□□ -0.12
ATF3-209ENST00000492118 SHPRHQ149N8 1683 aa14.28□□□□□ -0.12
ATF3-209ENST00000492118 FAM83GA6ND36 823 aa14.27□□□□□ -0.12
ATF3-209ENST00000492118 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.12
ATF3-209ENST00000492118 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.13
ATF3-209ENST00000492118 SMG6Q86US8 1419 aaKnown RBP14.26□□□□□ -0.13
ATF3-209ENST00000492118 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
ATF3-209ENST00000492118 ANKRD24Q8TF21 1146 aa14.26□□□□□ -0.13
ATF3-209ENST00000492118 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
ATF3-209ENST00000492118 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
ATF3-209ENST00000492118 EYA1Q99502 592 aa14.26□□□□□ -0.13
ATF3-209ENST00000492118 APAF1O14727 1248 aa14.25□□□□□ -0.13
ATF3-209ENST00000492118 PRKAR2BP31323 418 aa14.25□□□□□ -0.13
ATF3-209ENST00000492118 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
ATF3-209ENST00000492118 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
ATF3-209ENST00000492118 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
ATF3-209ENST00000492118 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
ATF3-209ENST00000492118 BTG4Q9NY30 223 aa14.24□□□□□ -0.13
ATF3-209ENST00000492118 INSRP06213 1382 aa14.24□□□□□ -0.13
ATF3-209ENST00000492118 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
ATF3-209ENST00000492118 ABCA3Q99758 1704 aa14.24□□□□□ -0.13
ATF3-209ENST00000492118 EVA1CP58658 441 aa14.23□□□□□ -0.13
ATF3-209ENST00000492118 C8orf37Q96NL8 207 aa14.23□□□□□ -0.13
ATF3-209ENST00000492118 RGPD2P0DJD1 1756 aa14.23□□□□□ -0.13
ATF3-209ENST00000492118 PHACTR3Q96KR7 559 aa14.23□□□□□ -0.13
ATF3-209ENST00000492118 JCADQ9P266 1359 aa14.22□□□□□ -0.13
ATF3-209ENST00000492118 RSPH6AQ9H0K4 717 aa14.21□□□□□ -0.13
ATF3-209ENST00000492118 RTL1A6NKG5 1358 aa14.21□□□□□ -0.13
ATF3-209ENST00000492118 ERBB3P21860 1342 aa14.21□□□□□ -0.13
ATF3-209ENST00000492118 MAPK8IP3Q9UPT6 1336 aa14.21□□□□□ -0.13
ATF3-209ENST00000492118 TOM1L2Q6ZVM7 507 aa14.21□□□□□ -0.13
ATF3-209ENST00000492118 TCP11L2Q8N4U5 519 aa14.21□□□□□ -0.13
ATF3-209ENST00000492118 CHMP4AQ9BY43 222 aa14.21□□□□□ -0.13
ATF3-209ENST00000492118 MEX3CQ5U5Q3 659 aaKnown RBP14.2□□□□□ -0.14
ATF3-209ENST00000492118 LARP1Q6PKG0 1096 aaKnown RBP14.2□□□□□ -0.14
ATF3-209ENST00000492118 RUNDC1Q96C34 613 aa14.2□□□□□ -0.14
ATF3-209ENST00000492118 CAMTA1Q9Y6Y1 1673 aa14.2□□□□□ -0.14
ATF3-209ENST00000492118 CPDO75976 1380 aa14.2□□□□□ -0.14
ATF3-209ENST00000492118 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
ATF3-209ENST00000492118 FCHSD2O94868 740 aa14.19□□□□□ -0.14
ATF3-209ENST00000492118 NEFMP07197 916 aa14.18□□□□□ -0.14
ATF3-209ENST00000492118 PLEKHF1Q96S99 279 aa14.18□□□□□ -0.14
ATF3-209ENST00000492118 CCDC9Q9Y3X0 531 aaKnown RBP14.18□□□□□ -0.14
ATF3-209ENST00000492118 KIF24Q5T7B8 1368 aa14.18□□□□□ -0.14
ATF3-209ENST00000492118 BLMP54132 1417 aaPredicted RBP14.18□□□□□ -0.14
ATF3-209ENST00000492118 COL18A1P39060 1754 aa14.18□□□□□ -0.14
ATF3-209ENST00000492118 IGSF1Q8N6C5 1336 aa14.17□□□□□ -0.14
ATF3-209ENST00000492118 TAF7LQ5H9L4 462 aa14.17□□□□□ -0.14
ATF3-209ENST00000492118 COL22A1Q8NFW1 1626 aaPredicted RBP14.17□□□□□ -0.14
ATF3-209ENST00000492118 RIPK4P57078 832 aa14.15□□□□□ -0.14
ATF3-209ENST00000492118 LRP6O75581 1613 aa14.15□□□□□ -0.14
ATF3-209ENST00000492118 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
ATF3-209ENST00000492118 THUMPD2Q9BTF0 503 aaKnown RBP14.15□□□□□ -0.14
ATF3-209ENST00000492118 TMPOP42166 694 aaKnown RBP14.14□□□□□ -0.15
ATF3-209ENST00000492118 DCTN1Q14203 1278 aa14.14□□□□□ -0.15
ATF3-209ENST00000492118 CDCA7LQ96GN5 454 aa14.14□□□□□ -0.15
ATF3-209ENST00000492118 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms