RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
NCKAP1-206ENST00000492058 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
NCKAP1-206ENST00000492058 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
NCKAP1-206ENST00000492058 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
NCKAP1-206ENST00000492058 EMP3P54852 163 aa13.77□□□□□ -0.21
NCKAP1-206ENST00000492058 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
NCKAP1-206ENST00000492058 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
NCKAP1-206ENST00000492058 TRIM37O94972 964 aa13.76□□□□□ -0.21
NCKAP1-206ENST00000492058 MMRN1Q13201 1228 aa13.76□□□□□ -0.21
NCKAP1-206ENST00000492058 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
NCKAP1-206ENST00000492058 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
NCKAP1-206ENST00000492058 APBA3O96018 575 aa13.75□□□□□ -0.21
NCKAP1-206ENST00000492058 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
NCKAP1-206ENST00000492058 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
NCKAP1-206ENST00000492058 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
NCKAP1-206ENST00000492058 CAMKK2Q96RR4 588 aa13.73□□□□□ -0.21
NCKAP1-206ENST00000492058 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
NCKAP1-206ENST00000492058 SBNO1A3KN83 1393 aa13.72□□□□□ -0.21
NCKAP1-206ENST00000492058 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
NCKAP1-206ENST00000492058 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
NCKAP1-206ENST00000492058 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.21
NCKAP1-206ENST00000492058 PRAM1Q96QH2 718 aa13.71□□□□□ -0.21
NCKAP1-206ENST00000492058 STRN4Q9NRL3 753 aa13.71□□□□□ -0.21
NCKAP1-206ENST00000492058 POGKQ9P215 609 aa13.71□□□□□ -0.21
NCKAP1-206ENST00000492058 USP35Q9P2H5 1018 aa13.71□□□□□ -0.21
NCKAP1-206ENST00000492058 TECPR2O15040 1411 aa13.71□□□□□ -0.22
NCKAP1-206ENST00000492058 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
NCKAP1-206ENST00000492058 PPLO60437 1756 aa13.71□□□□□ -0.22
NCKAP1-206ENST00000492058 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
NCKAP1-206ENST00000492058 NBPF8Q3BBV2 869 aa13.7□□□□□ -0.22
NCKAP1-206ENST00000492058 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
NCKAP1-206ENST00000492058 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
NCKAP1-206ENST00000492058 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
NCKAP1-206ENST00000492058 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
NCKAP1-206ENST00000492058 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
NCKAP1-206ENST00000492058 HIRIP3Q9BW71 556 aaPredicted RBP13.69□□□□□ -0.22
NCKAP1-206ENST00000492058 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
NCKAP1-206ENST00000492058 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
NCKAP1-206ENST00000492058 CHRNA2Q15822 529 aa13.68□□□□□ -0.22
NCKAP1-206ENST00000492058 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
NCKAP1-206ENST00000492058 SIRT1Q96EB6 747 aa13.68□□□□□ -0.22
NCKAP1-206ENST00000492058 ANKRD30BQ9BXX2 1392 aa13.68□□□□□ -0.22
NCKAP1-206ENST00000492058 SPON1Q9HCB6 807 aa13.67□□□□□ -0.22
NCKAP1-206ENST00000492058 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
NCKAP1-206ENST00000492058 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
NCKAP1-206ENST00000492058 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
NCKAP1-206ENST00000492058 EVA1CP58658 441 aa13.66□□□□□ -0.22
NCKAP1-206ENST00000492058 NGDNQ8NEJ9 315 aaKnown RBP13.66□□□□□ -0.22
NCKAP1-206ENST00000492058 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
NCKAP1-206ENST00000492058 RGPD1P0DJD0 1748 aa13.66□□□□□ -0.22
NCKAP1-206ENST00000492058 DHX57Q6P158 1386 aaKnown RBP13.66□□□□□ -0.22
NCKAP1-206ENST00000492058 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
NCKAP1-206ENST00000492058 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
NCKAP1-206ENST00000492058 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
NCKAP1-206ENST00000492058 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
NCKAP1-206ENST00000492058 DISP2A7MBM2 1401 aa13.64□□□□□ -0.23
NCKAP1-206ENST00000492058 KCNQ2O43526 872 aa13.64□□□□□ -0.23
NCKAP1-206ENST00000492058 NUTM2GQ5VZR2 741 aa13.64□□□□□ -0.23
NCKAP1-206ENST00000492058 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
NCKAP1-206ENST00000492058 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
NCKAP1-206ENST00000492058 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
NCKAP1-206ENST00000492058 DPY19L2Q6NUT2 758 aa13.63□□□□□ -0.23
NCKAP1-206ENST00000492058 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
NCKAP1-206ENST00000492058 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
NCKAP1-206ENST00000492058 PIK3C2GO75747 1445 aa13.62□□□□□ -0.23
NCKAP1-206ENST00000492058 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
NCKAP1-206ENST00000492058 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
NCKAP1-206ENST00000492058 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
NCKAP1-206ENST00000492058 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
NCKAP1-206ENST00000492058 COL14A1Q05707 1796 aaKnown RBP13.61□□□□□ -0.23
NCKAP1-206ENST00000492058 MPHOSPH9Q99550 1183 aa13.61□□□□□ -0.23
NCKAP1-206ENST00000492058 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
NCKAP1-206ENST00000492058 PARD3Q8TEW0 1356 aa13.6□□□□□ -0.23
NCKAP1-206ENST00000492058 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
NCKAP1-206ENST00000492058 TNS1Q9HBL0 1735 aaKnown RBP13.59□□□□□ -0.23
NCKAP1-206ENST00000492058 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
NCKAP1-206ENST00000492058 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
NCKAP1-206ENST00000492058 ADGRB2O60241 1585 aa13.58□□□□□ -0.23
NCKAP1-206ENST00000492058 ANKARQ7Z5J8 1434 aa13.58□□□□□ -0.24
NCKAP1-206ENST00000492058 SENP3-EIF4A1A0A087X0R7 540 aa13.58□□□□□ -0.24
NCKAP1-206ENST00000492058 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
NCKAP1-206ENST00000492058 THSD7AQ9UPZ6 1657 aa13.57□□□□□ -0.24
NCKAP1-206ENST00000492058 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
NCKAP1-206ENST00000492058 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
NCKAP1-206ENST00000492058 ZBTB7CA1YPR0 619 aa13.56□□□□□ -0.24
NCKAP1-206ENST00000492058 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
NCKAP1-206ENST00000492058 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
NCKAP1-206ENST00000492058 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
NCKAP1-206ENST00000492058 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
NCKAP1-206ENST00000492058 DOK7Q18PE1 504 aa13.55□□□□□ -0.24
NCKAP1-206ENST00000492058 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
NCKAP1-206ENST00000492058 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
NCKAP1-206ENST00000492058 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
NCKAP1-206ENST00000492058 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
NCKAP1-206ENST00000492058 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
NCKAP1-206ENST00000492058 EIF3AQ14152 1382 aaKnown RBP13.53□□□□□ -0.24
NCKAP1-206ENST00000492058 RIMBP2O15034 1052 aa13.52□□□□□ -0.25
NCKAP1-206ENST00000492058 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
NCKAP1-206ENST00000492058 KRTAP3-3Q9BYR6 98 aa13.52□□□□□ -0.25
NCKAP1-206ENST00000492058 KRTAP3-2Q9BYR7 98 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms