RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
NCSTN-213ENST00000491332 EMID1Q96A84 441 aaPredicted RBP10.31□□□□□ -0.76
NCSTN-213ENST00000491332 SLC10A4Q96EP9 437 aa10.31□□□□□ -0.76
NCSTN-213ENST00000491332 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
NCSTN-213ENST00000491332 CDCA8Q53HL2 280 aa10.3□□□□□ -0.76
NCSTN-213ENST00000491332 PLPP7Q8NBV4 271 aa10.3□□□□□ -0.76
NCSTN-213ENST00000491332 TRAF7Q6Q0C0 670 aa10.29□□□□□ -0.76
NCSTN-213ENST00000491332 DEPDC4Q8N2C3 294 aa10.29□□□□□ -0.76
NCSTN-213ENST00000491332 TRAIPQ9BWF2 469 aa10.29□□□□□ -0.76
NCSTN-213ENST00000491332 VARSP26640 1264 aaKnown RBP10.28□□□□□ -0.76
NCSTN-213ENST00000491332 NCOA4Q13772 614 aa10.28□□□□□ -0.76
NCSTN-213ENST00000491332 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
NCSTN-213ENST00000491332 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
NCSTN-213ENST00000491332 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
NCSTN-213ENST00000491332 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
NCSTN-213ENST00000491332 ESPNB1AK53 854 aa10.27□□□□□ -0.77
NCSTN-213ENST00000491332 ATG7O95352 703 aa10.27□□□□□ -0.77
NCSTN-213ENST00000491332 MAP7D1Q3KQU3 841 aa10.27□□□□□ -0.77
NCSTN-213ENST00000491332 NBPF20Q3BBV1 942 aa10.26□□□□□ -0.77
NCSTN-213ENST00000491332 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
NCSTN-213ENST00000491332 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
NCSTN-213ENST00000491332 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
NCSTN-213ENST00000491332 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
NCSTN-213ENST00000491332 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
NCSTN-213ENST00000491332 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
NCSTN-213ENST00000491332 MKRN1Q9UHC7 482 aaKnown RBP10.24□□□□□ -0.77
NCSTN-213ENST00000491332 DOLKQ9UPQ8 538 aa10.24□□□□□ -0.77
NCSTN-213ENST00000491332 MAP4K5Q9Y4K4 846 aa10.24□□□□□ -0.77
NCSTN-213ENST00000491332 CSB-PGBD3P0DP91 1061 aa10.23□□□□□ -0.77
NCSTN-213ENST00000491332 KCTD15Q96SI1 283 aaPredicted RBP10.23□□□□□ -0.77
NCSTN-213ENST00000491332 USTQ9Y2C2 406 aa10.23□□□□□ -0.77
NCSTN-213ENST00000491332 ELOAQ14241 798 aaKnown RBP10.22□□□□□ -0.77
NCSTN-213ENST00000491332 EML3Q32P44 896 aa10.22□□□□□ -0.77
NCSTN-213ENST00000491332 SEPT12Q8IYM1 358 aa10.22□□□□□ -0.77
NCSTN-213ENST00000491332 FAM196BA6NMK8 535 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L15C9J2P7 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L10C9JJH3 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L13C9JLJ4 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L12C9JPN9 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L11C9JVI0 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L21D6R901 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L18D6R9N7 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L22D6RA61 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L17D6RBQ6 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L19D6RCP7 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L20D6RJB6 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 SLC19A1P41440 591 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 USP17L24Q0WX57 530 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 CRTC2Q53ET0 693 aaPredicted RBP10.21□□□□□ -0.77
NCSTN-213ENST00000491332 CDCA7Q9BWT1 371 aaPredicted RBP10.21□□□□□ -0.77
NCSTN-213ENST00000491332 ZMIZ1Q9ULJ6 1067 aa10.21□□□□□ -0.77
NCSTN-213ENST00000491332 CARNS1A5YM72 827 aa10.2□□□□□ -0.78
NCSTN-213ENST00000491332 TMEM88BA6NKF7 163 aa10.2□□□□□ -0.78
NCSTN-213ENST00000491332 PDE4CQ08493 712 aa10.2□□□□□ -0.78
NCSTN-213ENST00000491332 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
NCSTN-213ENST00000491332 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
NCSTN-213ENST00000491332 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
NCSTN-213ENST00000491332 VASH1Q7L8A9 365 aaPredicted RBP10.2□□□□□ -0.78
NCSTN-213ENST00000491332 CDK15Q96Q40 435 aa10.2□□□□□ -0.78
NCSTN-213ENST00000491332 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
NCSTN-213ENST00000491332 TLL2Q9Y6L7 1015 aa10.2□□□□□ -0.78
NCSTN-213ENST00000491332 A0A0G2JS52 829 aa10.19□□□□□ -0.78
NCSTN-213ENST00000491332 SIAH2O43255 324 aa10.19□□□□□ -0.78
NCSTN-213ENST00000491332 PTK7Q13308 1070 aa10.19□□□□□ -0.78
NCSTN-213ENST00000491332 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
NCSTN-213ENST00000491332 MPNDQ8N594 471 aa10.19□□□□□ -0.78
NCSTN-213ENST00000491332 NOVA2Q9UNW9 492 aaKnown RBP10.19□□□□□ -0.78
NCSTN-213ENST00000491332 NOD1Q9Y239 953 aa10.19□□□□□ -0.78
NCSTN-213ENST00000491332 PCDHB11Q9Y5F2 797 aa10.19□□□□□ -0.78
NCSTN-213ENST00000491332 WNT7AO00755 349 aa10.18□□□□□ -0.78
NCSTN-213ENST00000491332 RASA1P20936 1047 aa10.18□□□□□ -0.78
NCSTN-213ENST00000491332 RAB15P59190 212 aa10.18□□□□□ -0.78
NCSTN-213ENST00000491332 SPRYD7Q5W111 196 aa10.18□□□□□ -0.78
NCSTN-213ENST00000491332 CLDN10P78369 228 aa10.17□□□□□ -0.78
NCSTN-213ENST00000491332 ARID5BQ14865 1188 aa10.17□□□□□ -0.78
NCSTN-213ENST00000491332 LARP1Q6PKG0 1096 aaKnown RBP10.17□□□□□ -0.78
NCSTN-213ENST00000491332 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
NCSTN-213ENST00000491332 FSHRP23945 695 aa10.16□□□□□ -0.78
NCSTN-213ENST00000491332 GRM5P41594 1212 aa10.16□□□□□ -0.78
NCSTN-213ENST00000491332 TMEM164Q5U3C3 297 aa10.16□□□□□ -0.78
NCSTN-213ENST00000491332 TRIM50Q86XT4 487 aa10.16□□□□□ -0.78
NCSTN-213ENST00000491332 OGFOD1Q8N543 542 aa10.16□□□□□ -0.78
NCSTN-213ENST00000491332 MRGPRX2Q96LB1 330 aa10.16□□□□□ -0.78
NCSTN-213ENST00000491332 ERVH48-1M5A8F1 160 aa10.15□□□□□ -0.78
NCSTN-213ENST00000491332 DNAAF2Q9NVR5 837 aaKnown RBP10.15□□□□□ -0.78
NCSTN-213ENST00000491332 KIAA1024Q9UPX6 916 aa10.15□□□□□ -0.78
NCSTN-213ENST00000491332 ZBTB7BO15156 539 aaPredicted RBP10.14□□□□□ -0.79
NCSTN-213ENST00000491332 DKK1O94907 266 aa10.14□□□□□ -0.79
NCSTN-213ENST00000491332 ATP1A2P50993 1020 aa10.14□□□□□ -0.79
NCSTN-213ENST00000491332 GTF2IP78347 998 aa10.14□□□□□ -0.79
NCSTN-213ENST00000491332 KCTD17Q8N5Z5 321 aa10.14□□□□□ -0.79
NCSTN-213ENST00000491332 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
NCSTN-213ENST00000491332 ADH1CP00326 375 aa10.13□□□□□ -0.79
NCSTN-213ENST00000491332 SCTRP47872 440 aa10.13□□□□□ -0.79
NCSTN-213ENST00000491332 USP4Q13107 963 aa10.13□□□□□ -0.79
NCSTN-213ENST00000491332 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
NCSTN-213ENST00000491332 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
NCSTN-213ENST00000491332 ANKMY2Q8IV38 441 aa10.13□□□□□ -0.79
NCSTN-213ENST00000491332 SIRT1Q96EB6 747 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms