RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
LIMK1-207ENST00000491052 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
LIMK1-207ENST00000491052 VPS72Q15906 364 aa17.66■□□□□ 0.42
LIMK1-207ENST00000491052 ARHGEF25Q86VW2 580 aa17.66■□□□□ 0.42
LIMK1-207ENST00000491052 COL5A2P05997 1499 aaPredicted RBP17.66■□□□□ 0.42
LIMK1-207ENST00000491052 RGS12O14924 1447 aa17.65■□□□□ 0.42
LIMK1-207ENST00000491052 EVA1CP58658 441 aa17.65■□□□□ 0.42
LIMK1-207ENST00000491052 GJD4Q96KN9 370 aaPredicted RBP17.65■□□□□ 0.42
LIMK1-207ENST00000491052 FAM208AQ9UK61 1670 aaKnown RBP17.64■□□□□ 0.42
LIMK1-207ENST00000491052 RGPD2P0DJD1 1756 aa17.64■□□□□ 0.41
LIMK1-207ENST00000491052 PEAK1Q9H792 1746 aa17.63■□□□□ 0.41
LIMK1-207ENST00000491052 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
LIMK1-207ENST00000491052 SPATA31A5Q5VU36 1347 aa17.61■□□□□ 0.41
LIMK1-207ENST00000491052 SPATA31A7Q8IWB4 1347 aa17.61■□□□□ 0.41
LIMK1-207ENST00000491052 THSD7AQ9UPZ6 1657 aa17.61■□□□□ 0.41
LIMK1-207ENST00000491052 FBLN1P23142 703 aa17.6■□□□□ 0.41
LIMK1-207ENST00000491052 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
LIMK1-207ENST00000491052 AXIN2Q9Y2T1 843 aa17.6■□□□□ 0.41
LIMK1-207ENST00000491052 NSD2O96028 1365 aa17.6■□□□□ 0.41
LIMK1-207ENST00000491052 CRB1P82279 1406 aa17.59■□□□□ 0.41
LIMK1-207ENST00000491052 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
LIMK1-207ENST00000491052 A0A0G2JS52 829 aa17.59■□□□□ 0.41
LIMK1-207ENST00000491052 MYT1Q01538 1121 aa17.59■□□□□ 0.41
LIMK1-207ENST00000491052 USP35Q9P2H5 1018 aa17.59■□□□□ 0.41
LIMK1-207ENST00000491052 BLMP54132 1417 aaPredicted RBP17.58■□□□□ 0.41
LIMK1-207ENST00000491052 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.4
LIMK1-207ENST00000491052 CSB-PGBD3P0DP91 1061 aa17.58■□□□□ 0.4
LIMK1-207ENST00000491052 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.4
LIMK1-207ENST00000491052 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
LIMK1-207ENST00000491052 AMPHP49418 695 aa17.57■□□□□ 0.4
LIMK1-207ENST00000491052 FAM98CQ17RN3 349 aaKnown RBP17.57■□□□□ 0.4
LIMK1-207ENST00000491052 PARP4Q9UKK3 1724 aaKnown RBP17.57■□□□□ 0.4
LIMK1-207ENST00000491052 RTL1A6NKG5 1358 aa17.56■□□□□ 0.4
LIMK1-207ENST00000491052 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
LIMK1-207ENST00000491052 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
LIMK1-207ENST00000491052 IP6K1Q92551 441 aa17.55■□□□□ 0.4
LIMK1-207ENST00000491052 ERBB3P21860 1342 aa17.54■□□□□ 0.4
LIMK1-207ENST00000491052 HOXC9P31274 260 aa17.54■□□□□ 0.4
LIMK1-207ENST00000491052 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
LIMK1-207ENST00000491052 SEPT12Q8IYM1 358 aa17.54■□□□□ 0.4
LIMK1-207ENST00000491052 LTV1Q96GA3 475 aaPredicted RBP17.54■□□□□ 0.4
LIMK1-207ENST00000491052 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
LIMK1-207ENST00000491052 SOCS7O14512 581 aa17.53■□□□□ 0.4
LIMK1-207ENST00000491052 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
LIMK1-207ENST00000491052 TCP11L2Q8N4U5 519 aa17.53■□□□□ 0.4
LIMK1-207ENST00000491052 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
LIMK1-207ENST00000491052 FLT4P35916 1363 aa17.53■□□□□ 0.4
LIMK1-207ENST00000491052 PPM1GO15355 546 aaPredicted RBP17.52■□□□□ 0.4
LIMK1-207ENST00000491052 PER1O15534 1290 aaPredicted RBP17.52■□□□□ 0.4
LIMK1-207ENST00000491052 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
LIMK1-207ENST00000491052 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
LIMK1-207ENST00000491052 KIF24Q5T7B8 1368 aa17.52■□□□□ 0.39
LIMK1-207ENST00000491052 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
LIMK1-207ENST00000491052 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
LIMK1-207ENST00000491052 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
LIMK1-207ENST00000491052 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
LIMK1-207ENST00000491052 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
LIMK1-207ENST00000491052 CARD10Q9BWT7 1032 aa17.5■□□□□ 0.39
LIMK1-207ENST00000491052 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
LIMK1-207ENST00000491052 KAT6BQ8WYB5 2073 aa17.49■□□□□ 0.39
LIMK1-207ENST00000491052 INSRP06213 1382 aa17.49■□□□□ 0.39
LIMK1-207ENST00000491052 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
LIMK1-207ENST00000491052 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
LIMK1-207ENST00000491052 KRT27Q7Z3Y8 459 aa17.47■□□□□ 0.39
LIMK1-207ENST00000491052 NPC1L1Q9UHC9 1359 aa17.47■□□□□ 0.39
LIMK1-207ENST00000491052 SBF2Q86WG5 1849 aa17.46■□□□□ 0.39
LIMK1-207ENST00000491052 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
LIMK1-207ENST00000491052 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
LIMK1-207ENST00000491052 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
LIMK1-207ENST00000491052 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
LIMK1-207ENST00000491052 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
LIMK1-207ENST00000491052 PDE3BQ13370 1112 aa17.42■□□□□ 0.38
LIMK1-207ENST00000491052 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
LIMK1-207ENST00000491052 TNS2Q63HR2 1409 aa17.41■□□□□ 0.38
LIMK1-207ENST00000491052 DDB1Q16531 1140 aa17.41■□□□□ 0.38
LIMK1-207ENST00000491052 FAM182BQ5T319 152 aa17.41■□□□□ 0.38
LIMK1-207ENST00000491052 USHBP1Q8N6Y0 703 aa17.41■□□□□ 0.38
LIMK1-207ENST00000491052 IL2RBP14784 551 aa17.4■□□□□ 0.38
LIMK1-207ENST00000491052 NBPF6Q5VWK0 638 aa17.4■□□□□ 0.38
LIMK1-207ENST00000491052 NBPF4Q96M43 638 aa17.4■□□□□ 0.38
LIMK1-207ENST00000491052 PKD1L3Q7Z443 1732 aa17.39■□□□□ 0.37
LIMK1-207ENST00000491052 MEGF6O75095 1541 aa17.39■□□□□ 0.37
LIMK1-207ENST00000491052 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.37
LIMK1-207ENST00000491052 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
LIMK1-207ENST00000491052 EP400Q96L91 3159 aa17.37■□□□□ 0.37
LIMK1-207ENST00000491052 MTHFSP49914 203 aa17.37■□□□□ 0.37
LIMK1-207ENST00000491052 OVOS2A0A0G2JMS6 1433 aa17.37■□□□□ 0.37
LIMK1-207ENST00000491052 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
LIMK1-207ENST00000491052 EXOC5O00471 708 aa17.36■□□□□ 0.37
LIMK1-207ENST00000491052 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
LIMK1-207ENST00000491052 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
LIMK1-207ENST00000491052 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
LIMK1-207ENST00000491052 EYA1Q99502 592 aa17.35■□□□□ 0.37
LIMK1-207ENST00000491052 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
LIMK1-207ENST00000491052 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
LIMK1-207ENST00000491052 NHSQ6T4R5 1651 aa17.33■□□□□ 0.37
LIMK1-207ENST00000491052 COL3A1P02461 1466 aaPredicted RBP17.33■□□□□ 0.37
LIMK1-207ENST00000491052 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
LIMK1-207ENST00000491052 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
LIMK1-207ENST00000491052 PPP2R1AP30153 589 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms