RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
SCAMP3-208ENST00000490999 QRICH2Q9H0J4 1663 aa22.31■■□□□ 1.16
SCAMP3-208ENST00000490999 NLRP6P59044 892 aa22.31■■□□□ 1.16
SCAMP3-208ENST00000490999 CENPJQ9HC77 1338 aaPredicted RBP22.31■■□□□ 1.16
SCAMP3-208ENST00000490999 PLSCR1O15162 318 aa22.3■■□□□ 1.16
SCAMP3-208ENST00000490999 C11orf95C9JLR9 678 aaPredicted RBP22.29■■□□□ 1.16
SCAMP3-208ENST00000490999 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
SCAMP3-208ENST00000490999 CPSF1Q10570 1443 aaKnown RBP22.29■■□□□ 1.16
SCAMP3-208ENST00000490999 COL18A1P39060 1754 aa22.28■■□□□ 1.16
SCAMP3-208ENST00000490999 SOX12O15370 315 aa22.28■■□□□ 1.16
SCAMP3-208ENST00000490999 PROM2Q8N271 834 aa22.28■■□□□ 1.16
SCAMP3-208ENST00000490999 CABP1Q9NZU7 370 aa22.28■■□□□ 1.16
SCAMP3-208ENST00000490999 AXIN2Q9Y2T1 843 aa22.28■■□□□ 1.16
SCAMP3-208ENST00000490999 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
SCAMP3-208ENST00000490999 ATF5Q9Y2D1 282 aaPredicted RBP22.27■■□□□ 1.16
SCAMP3-208ENST00000490999 PTGER2P43116 358 aa22.26■■□□□ 1.15
SCAMP3-208ENST00000490999 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
SCAMP3-208ENST00000490999 AKAP12Q02952 1782 aa22.25■■□□□ 1.15
SCAMP3-208ENST00000490999 CSB-PGBD3P0DP91 1061 aa22.22■■□□□ 1.15
SCAMP3-208ENST00000490999 TXNRD1Q16881 649 aa22.22■■□□□ 1.15
SCAMP3-208ENST00000490999 ZNF784Q8NCA9 323 aaPredicted RBP22.22■■□□□ 1.15
SCAMP3-208ENST00000490999 STK32BQ9NY57 414 aa22.22■■□□□ 1.15
SCAMP3-208ENST00000490999 BCL9O00512 1426 aa22.22■■□□□ 1.15
SCAMP3-208ENST00000490999 FHDC1Q9C0D6 1143 aaPredicted RBP22.21■■□□□ 1.15
SCAMP3-208ENST00000490999 TNS2Q63HR2 1409 aa22.2■■□□□ 1.14
SCAMP3-208ENST00000490999 NFAT5O94916 1531 aa22.19■■□□□ 1.14
SCAMP3-208ENST00000490999 RGPD5Q99666 1765 aa22.18■■□□□ 1.14
SCAMP3-208ENST00000490999 SLC15A2Q16348 729 aa22.18■■□□□ 1.14
SCAMP3-208ENST00000490999 ARHGEF25Q86VW2 580 aa22.18■■□□□ 1.14
SCAMP3-208ENST00000490999 CDCA7Q9BWT1 371 aaPredicted RBP22.18■■□□□ 1.14
SCAMP3-208ENST00000490999 CARD10Q9BWT7 1032 aa22.17■■□□□ 1.14
SCAMP3-208ENST00000490999 TRPM1Q7Z4N2 1603 aa22.17■■□□□ 1.14
SCAMP3-208ENST00000490999 TTC21BQ7Z4L5 1316 aa22.16■■□□□ 1.14
SCAMP3-208ENST00000490999 SYT17Q9BSW7 474 aa22.16■■□□□ 1.14
SCAMP3-208ENST00000490999 NHSQ6T4R5 1651 aa22.16■■□□□ 1.14
SCAMP3-208ENST00000490999 GOLGB1Q14789 3259 aaKnown RBP22.16■■□□□ 1.14
SCAMP3-208ENST00000490999 ACSBG1Q96GR2 724 aa22.15■■□□□ 1.14
SCAMP3-208ENST00000490999 PAPPAQ13219 1627 aa22.14■■□□□ 1.14
SCAMP3-208ENST00000490999 MTFR1LQ9H019 292 aa22.14■■□□□ 1.13
SCAMP3-208ENST00000490999 ABCC6O95255 1503 aa22.13■■□□□ 1.13
SCAMP3-208ENST00000490999 EXOC5O00471 708 aa22.13■■□□□ 1.13
SCAMP3-208ENST00000490999 SGIP1Q9BQI5 828 aa22.13■■□□□ 1.13
SCAMP3-208ENST00000490999 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
SCAMP3-208ENST00000490999 KCNH5Q8NCM2 988 aa22.12■■□□□ 1.13
SCAMP3-208ENST00000490999 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
SCAMP3-208ENST00000490999 SENP3-EIF4A1A0A087X0R7 540 aa22.11■■□□□ 1.13
SCAMP3-208ENST00000490999 ZNF827Q17R98 1081 aa22.09■■□□□ 1.13
SCAMP3-208ENST00000490999 ARXQ96QS3 562 aa22.08■■□□□ 1.13
SCAMP3-208ENST00000490999 KTN1Q86UP2 1357 aaKnown RBP22.08■■□□□ 1.12
SCAMP3-208ENST00000490999 TTC21AQ8NDW8 1320 aa22.07■■□□□ 1.12
SCAMP3-208ENST00000490999 NLRP2Q9NX02 1062 aa22.06■■□□□ 1.12
SCAMP3-208ENST00000490999 ERBB3P21860 1342 aa22.06■■□□□ 1.12
SCAMP3-208ENST00000490999 KLHL34Q8N239 644 aa22.05■■□□□ 1.12
SCAMP3-208ENST00000490999 BTAF1O14981 1849 aa22.05■■□□□ 1.12
SCAMP3-208ENST00000490999 MON2Q7Z3U7 1717 aa22.04■■□□□ 1.12
SCAMP3-208ENST00000490999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.04■■□□□ 1.12
SCAMP3-208ENST00000490999 L3MBTL2Q969R5 705 aa22.04■■□□□ 1.12
SCAMP3-208ENST00000490999 ROCK2O75116 1388 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-208ENST00000490999 ZNF692Q9BU19 519 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-208ENST00000490999 MAP3K5Q99683 1374 aa22.02■■□□□ 1.12
SCAMP3-208ENST00000490999 C1QTNF8P60827 252 aa22.02■■□□□ 1.12
SCAMP3-208ENST00000490999 NME9Q86XW9 330 aa22.02■■□□□ 1.12
SCAMP3-208ENST00000490999 LRRC4BQ9NT99 713 aa22.02■■□□□ 1.12
SCAMP3-208ENST00000490999 IL2RBP14784 551 aa22.01■■□□□ 1.11
SCAMP3-208ENST00000490999 LTN1O94822 1766 aa21.99■■□□□ 1.11
SCAMP3-208ENST00000490999 GPR162Q16538 588 aa21.99■■□□□ 1.11
SCAMP3-208ENST00000490999 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
SCAMP3-208ENST00000490999 USP54Q70EL1 1684 aa21.98■■□□□ 1.11
SCAMP3-208ENST00000490999 CHD4Q14839 1912 aa21.98■■□□□ 1.11
SCAMP3-208ENST00000490999 CD163L1Q9NR16 1453 aa21.98■■□□□ 1.11
SCAMP3-208ENST00000490999 ANKRD24Q8TF21 1146 aa21.98■■□□□ 1.11
SCAMP3-208ENST00000490999 CEP350Q5VT06 3117 aa21.98■■□□□ 1.11
SCAMP3-208ENST00000490999 USP31Q70CQ4 1352 aa21.98■■□□□ 1.11
SCAMP3-208ENST00000490999 SBNO2Q9Y2G9 1366 aa21.98■■□□□ 1.11
SCAMP3-208ENST00000490999 KCNQ4P56696 695 aa21.96■■□□□ 1.11
SCAMP3-208ENST00000490999 AKT1S1Q96B36 256 aa21.95■■□□□ 1.1
SCAMP3-208ENST00000490999 SIN3AQ96ST3 1273 aa21.94■■□□□ 1.1
SCAMP3-208ENST00000490999 PNPLA7Q6ZV29 1317 aa21.94■■□□□ 1.1
SCAMP3-208ENST00000490999 NLGN2Q8NFZ4 835 aa21.93■■□□□ 1.1
SCAMP3-208ENST00000490999 TUBGCP6Q96RT7 1819 aa21.92■■□□□ 1.1
SCAMP3-208ENST00000490999 GIGYF1O75420 1035 aaPredicted RBP21.92■■□□□ 1.1
SCAMP3-208ENST00000490999 DDX54Q8TDD1 881 aaKnown RBP21.92■■□□□ 1.1
SCAMP3-208ENST00000490999 SHANK3Q9BYB0 1731 aa21.92■■□□□ 1.1
SCAMP3-208ENST00000490999 POLD1P28340 1107 aa21.91■■□□□ 1.1
SCAMP3-208ENST00000490999 TMC1Q8TDI8 760 aa21.91■■□□□ 1.1
SCAMP3-208ENST00000490999 SYTL4Q96C24 671 aaPredicted RBP21.91■■□□□ 1.1
SCAMP3-208ENST00000490999 LTV1Q96GA3 475 aaPredicted RBP21.91■■□□□ 1.1
SCAMP3-208ENST00000490999 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
SCAMP3-208ENST00000490999 QSER1Q2KHR3 1735 aa21.89■■□□□ 1.1
SCAMP3-208ENST00000490999 NEUROD1Q13562 356 aa21.89■■□□□ 1.09
SCAMP3-208ENST00000490999 TFCP2L1Q9NZI6 479 aa21.89■■□□□ 1.09
SCAMP3-208ENST00000490999 EDC4Q6P2E9 1401 aaKnown RBP21.88■■□□□ 1.09
SCAMP3-208ENST00000490999 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
SCAMP3-208ENST00000490999 NSD2O96028 1365 aa21.87■■□□□ 1.09
SCAMP3-208ENST00000490999 SLC27A3Q5K4L6 730 aa21.87■■□□□ 1.09
SCAMP3-208ENST00000490999 COL24A1Q17RW2 1714 aa21.86■■□□□ 1.09
SCAMP3-208ENST00000490999 SLC16A10Q8TF71 515 aa21.86■■□□□ 1.09
SCAMP3-208ENST00000490999 SLC12A5Q9H2X9 1139 aa21.86■■□□□ 1.09
SCAMP3-208ENST00000490999 YBX3P16989 372 aaKnown RBP eCLIP21.85■■□□□ 1.098e-7■■■□□ 18.5
SCAMP3-208ENST00000490999 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms