RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
PCOLCE-209ENST00000490909 EVA1CP58658 441 aa12.21□□□□□ -0.45
PCOLCE-209ENST00000490909 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
PCOLCE-209ENST00000490909 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
PCOLCE-209ENST00000490909 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
PCOLCE-209ENST00000490909 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
PCOLCE-209ENST00000490909 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
PCOLCE-209ENST00000490909 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
PCOLCE-209ENST00000490909 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
PCOLCE-209ENST00000490909 BCL9O00512 1426 aa12.2□□□□□ -0.46
PCOLCE-209ENST00000490909 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
PCOLCE-209ENST00000490909 BTAF1O14981 1849 aa12.19□□□□□ -0.46
PCOLCE-209ENST00000490909 NLRP6P59044 892 aa12.19□□□□□ -0.46
PCOLCE-209ENST00000490909 ROCK2O75116 1388 aaKnown RBP12.18□□□□□ -0.46
PCOLCE-209ENST00000490909 SHANK3Q9BYB0 1731 aa12.18□□□□□ -0.46
PCOLCE-209ENST00000490909 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
PCOLCE-209ENST00000490909 TUBGCP6Q96RT7 1819 aa12.18□□□□□ -0.46
PCOLCE-209ENST00000490909 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
PCOLCE-209ENST00000490909 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
PCOLCE-209ENST00000490909 SIN3AQ96ST3 1273 aa12.17□□□□□ -0.46
PCOLCE-209ENST00000490909 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
PCOLCE-209ENST00000490909 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
PCOLCE-209ENST00000490909 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
PCOLCE-209ENST00000490909 TOM1L2Q6ZVM7 507 aa12.15□□□□□ -0.46
PCOLCE-209ENST00000490909 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
PCOLCE-209ENST00000490909 PDGFDQ9GZP0 370 aaPredicted RBP12.15□□□□□ -0.46
PCOLCE-209ENST00000490909 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
PCOLCE-209ENST00000490909 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
PCOLCE-209ENST00000490909 SOX12O15370 315 aa12.14□□□□□ -0.47
PCOLCE-209ENST00000490909 DDB1Q16531 1140 aa12.14□□□□□ -0.47
PCOLCE-209ENST00000490909 GOLGB1Q14789 3259 aaKnown RBP12.14□□□□□ -0.47
PCOLCE-209ENST00000490909 KTN1Q86UP2 1357 aaKnown RBP12.14□□□□□ -0.47
PCOLCE-209ENST00000490909 NINLQ9Y2I6 1382 aa12.14□□□□□ -0.47
PCOLCE-209ENST00000490909 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
PCOLCE-209ENST00000490909 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
PCOLCE-209ENST00000490909 PROM2Q8N271 834 aa12.13□□□□□ -0.47
PCOLCE-209ENST00000490909 USP31Q70CQ4 1352 aa12.13□□□□□ -0.47
PCOLCE-209ENST00000490909 COL24A1Q17RW2 1714 aa12.12□□□□□ -0.47
PCOLCE-209ENST00000490909 PLSCR1O15162 318 aa12.12□□□□□ -0.47
PCOLCE-209ENST00000490909 ERBB3P21860 1342 aa12.11□□□□□ -0.47
PCOLCE-209ENST00000490909 CCDC7Q96M83 1385 aa12.11□□□□□ -0.47
PCOLCE-209ENST00000490909 NBPF14Q5TI25 921 aa12.11□□□□□ -0.47
PCOLCE-209ENST00000490909 CARD10Q9BWT7 1032 aa12.11□□□□□ -0.47
PCOLCE-209ENST00000490909 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
PCOLCE-209ENST00000490909 A0A1W2PP64 1363 aa12.1□□□□□ -0.47
PCOLCE-209ENST00000490909 KCNQ2O43526 872 aa12.1□□□□□ -0.47
PCOLCE-209ENST00000490909 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
PCOLCE-209ENST00000490909 SPON1Q9HCB6 807 aa12.1□□□□□ -0.47
PCOLCE-209ENST00000490909 LY75O60449 1722 aa12.1□□□□□ -0.47
PCOLCE-209ENST00000490909 EDC4Q6P2E9 1401 aaKnown RBP12.1□□□□□ -0.47
PCOLCE-209ENST00000490909 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
PCOLCE-209ENST00000490909 NME9Q86XW9 330 aa12.09□□□□□ -0.47
PCOLCE-209ENST00000490909 PTGER2P43116 358 aa12.08□□□□□ -0.48
PCOLCE-209ENST00000490909 CDCA7Q9BWT1 371 aaPredicted RBP12.08□□□□□ -0.48
PCOLCE-209ENST00000490909 CHD4Q14839 1912 aa12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 NEUROD1Q13562 356 aa12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 KIF20BQ96Q89 1820 aa12.07□□□□□ -0.48
PCOLCE-209ENST00000490909 ZBTB7AO95365 584 aa12.06□□□□□ -0.48
PCOLCE-209ENST00000490909 TXNRD1Q16881 649 aa12.06□□□□□ -0.48
PCOLCE-209ENST00000490909 PPP1R1BQ9UD71 204 aaPredicted RBP12.06□□□□□ -0.48
PCOLCE-209ENST00000490909 YY1P25490 414 aa12.05□□□□□ -0.48
PCOLCE-209ENST00000490909 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
PCOLCE-209ENST00000490909 MEGF6O75095 1541 aa12.05□□□□□ -0.48
PCOLCE-209ENST00000490909 TOGARAM1Q9Y4F4 1720 aa12.04□□□□□ -0.48
PCOLCE-209ENST00000490909 ACSBG1Q96GR2 724 aa12.04□□□□□ -0.48
PCOLCE-209ENST00000490909 SLC15A2Q16348 729 aa12.03□□□□□ -0.48
PCOLCE-209ENST00000490909 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
PCOLCE-209ENST00000490909 CARD11Q9BXL7 1154 aa12.03□□□□□ -0.48
PCOLCE-209ENST00000490909 SLC12A5Q9H2X9 1139 aa12.03□□□□□ -0.48
PCOLCE-209ENST00000490909 NSD2O96028 1365 aa12.03□□□□□ -0.48
PCOLCE-209ENST00000490909 EXOC5O00471 708 aa12.02□□□□□ -0.49
PCOLCE-209ENST00000490909 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.49
PCOLCE-209ENST00000490909 ANKRD26Q9UPS8 1709 aa12.02□□□□□ -0.49
PCOLCE-209ENST00000490909 C5P01031 1676 aa12.01□□□□□ -0.49
PCOLCE-209ENST00000490909 IL2RBP14784 551 aa12.01□□□□□ -0.49
PCOLCE-209ENST00000490909 NLRP2Q9NX02 1062 aa12.01□□□□□ -0.49
PCOLCE-209ENST00000490909 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
PCOLCE-209ENST00000490909 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
PCOLCE-209ENST00000490909 TAF1LQ8IZX4 1826 aa12.01□□□□□ -0.49
PCOLCE-209ENST00000490909 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
PCOLCE-209ENST00000490909 TMC1Q8TDI8 760 aa12□□□□□ -0.49
PCOLCE-209ENST00000490909 TESK2Q96S53 571 aa12□□□□□ -0.49
PCOLCE-209ENST00000490909 FHDC1Q9C0D6 1143 aaPredicted RBP12□□□□□ -0.49
PCOLCE-209ENST00000490909 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
PCOLCE-209ENST00000490909 MTFR1LQ9H019 292 aa11.99□□□□□ -0.49
PCOLCE-209ENST00000490909 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
PCOLCE-209ENST00000490909 MAP3K5Q99683 1374 aa11.99□□□□□ -0.49
PCOLCE-209ENST00000490909 ITGB4P16144 1822 aa11.98□□□□□ -0.49
PCOLCE-209ENST00000490909 MAP3K19Q56UN5 1328 aa11.98□□□□□ -0.49
PCOLCE-209ENST00000490909 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
PCOLCE-209ENST00000490909 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
PCOLCE-209ENST00000490909 ANKRD36BQ8N2N9 1353 aa11.97□□□□□ -0.49
PCOLCE-209ENST00000490909 FBLN1P23142 703 aa11.97□□□□□ -0.49
PCOLCE-209ENST00000490909 SYT17Q9BSW7 474 aa11.97□□□□□ -0.49
PCOLCE-209ENST00000490909 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms