RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
SEMA3A-207ENST00000490883 PPP1R26Q5T8A7 1209 aaPredicted RBP9.56□□□□□ -0.88
SEMA3A-207ENST00000490883 EPS8L1Q8TE68 723 aa9.56□□□□□ -0.88
SEMA3A-207ENST00000490883 OCSTAMPQ9BR26 566 aa9.56□□□□□ -0.88
SEMA3A-207ENST00000490883 KDM4CQ9H3R0 1056 aa9.56□□□□□ -0.88
SEMA3A-207ENST00000490883 ATP1B4Q9UN42 357 aaPredicted RBP9.56□□□□□ -0.88
SEMA3A-207ENST00000490883 FIGNL2A6NMB9 653 aa9.55□□□□□ -0.88
SEMA3A-207ENST00000490883 ARHGAP9Q9BRR9 750 aa9.55□□□□□ -0.88
SEMA3A-207ENST00000490883 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
SEMA3A-207ENST00000490883 FKBPLQ9UIM3 349 aa9.55□□□□□ -0.88
SEMA3A-207ENST00000490883 EMILIN1Q9Y6C2 1016 aa9.55□□□□□ -0.88
SEMA3A-207ENST00000490883 VSIG8P0DPA2 414 aa9.54□□□□□ -0.88
SEMA3A-207ENST00000490883 PDXDC2PQ6P474 469 aa9.54□□□□□ -0.88
SEMA3A-207ENST00000490883 GPKOWQ92917 476 aaPredicted RBP eCLIP9.54□□□□□ -0.88
SEMA3A-207ENST00000490883 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
SEMA3A-207ENST00000490883 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
SEMA3A-207ENST00000490883 FAM181BA6NEQ2 426 aa9.52□□□□□ -0.89
SEMA3A-207ENST00000490883 AP1G2O75843 785 aa9.52□□□□□ -0.89
SEMA3A-207ENST00000490883 SH3D19Q5HYK7 790 aa9.52□□□□□ -0.89
SEMA3A-207ENST00000490883 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
SEMA3A-207ENST00000490883 ZBTB33Q86T24 672 aa9.51□□□□□ -0.89
SEMA3A-207ENST00000490883 AGBL1Q96MI9 1066 aa9.51□□□□□ -0.89
SEMA3A-207ENST00000490883 HMX1Q9NP08 348 aaPredicted RBP9.51□□□□□ -0.89
SEMA3A-207ENST00000490883 TTLL8A6PVC2 850 aa9.5□□□□□ -0.89
SEMA3A-207ENST00000490883 PPP2R2DQ66LE6 453 aa9.5□□□□□ -0.89
SEMA3A-207ENST00000490883 Q6ZVU0 165 aa9.5□□□□□ -0.89
SEMA3A-207ENST00000490883 SLC10A4Q96EP9 437 aa9.5□□□□□ -0.89
SEMA3A-207ENST00000490883 PTSQ03393 145 aa9.49□□□□□ -0.89
SEMA3A-207ENST00000490883 INTS6LQ5JSJ4 861 aaKnown RBP9.49□□□□□ -0.89
SEMA3A-207ENST00000490883 KRT76Q01546 638 aa9.48□□□□□ -0.89
SEMA3A-207ENST00000490883 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
SEMA3A-207ENST00000490883 TMPRSS4Q9NRS4 437 aa9.48□□□□□ -0.89
SEMA3A-207ENST00000490883 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
SEMA3A-207ENST00000490883 SPINT1O43278 529 aa9.47□□□□□ -0.89
SEMA3A-207ENST00000490883 RAB15P59190 212 aa9.47□□□□□ -0.89
SEMA3A-207ENST00000490883 RELBQ01201 579 aa9.47□□□□□ -0.89
SEMA3A-207ENST00000490883 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.47□□□□□ -0.89
SEMA3A-207ENST00000490883 CTSOP43234 321 aaPredicted RBP9.46□□□□□ -0.9
SEMA3A-207ENST00000490883 DDRGK1Q96HY6 314 aa9.46□□□□□ -0.9
SEMA3A-207ENST00000490883 PTK2Q05397 1052 aa9.45□□□□□ -0.9
SEMA3A-207ENST00000490883 INSM2Q96T92 566 aaPredicted RBP9.45□□□□□ -0.9
SEMA3A-207ENST00000490883 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
SEMA3A-207ENST00000490883 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
SEMA3A-207ENST00000490883 PRKCSHP14314 528 aaPredicted RBP9.44□□□□□ -0.9
SEMA3A-207ENST00000490883 CCDC155Q8N6L0 562 aa9.44□□□□□ -0.9
SEMA3A-207ENST00000490883 CNTNAP3BQ96NU0 1288 aa9.44□□□□□ -0.9
SEMA3A-207ENST00000490883 CNTNAP3Q9BZ76 1288 aa9.44□□□□□ -0.9
SEMA3A-207ENST00000490883 TPRNQ4KMQ1 711 aa9.43□□□□□ -0.9
SEMA3A-207ENST00000490883 CDV3Q9UKY7 258 aaKnown RBP9.43□□□□□ -0.9
SEMA3A-207ENST00000490883 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
SEMA3A-207ENST00000490883 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
SEMA3A-207ENST00000490883 RFC5P40937 340 aa9.42□□□□□ -0.9
SEMA3A-207ENST00000490883 DHX9Q08211 1270 aaKnown RBP9.42□□□□□ -0.9
SEMA3A-207ENST00000490883 ZNF784Q8NCA9 323 aaPredicted RBP9.42□□□□□ -0.9
SEMA3A-207ENST00000490883 SLC35F4A4IF30 521 aa9.41□□□□□ -0.9
SEMA3A-207ENST00000490883 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
SEMA3A-207ENST00000490883 RNFT1Q5M7Z0 435 aa9.4□□□□□ -0.9
SEMA3A-207ENST00000490883 KDF1Q8NAX2 398 aaPredicted RBP9.4□□□□□ -0.9
SEMA3A-207ENST00000490883 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
SEMA3A-207ENST00000490883 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
SEMA3A-207ENST00000490883 LILRA1O75019 489 aa9.39□□□□□ -0.91
SEMA3A-207ENST00000490883 DZIP3Q86Y13 1208 aaKnown RBP9.39□□□□□ -0.91
SEMA3A-207ENST00000490883 VWA5B2Q8N398 1253 aa9.39□□□□□ -0.91
SEMA3A-207ENST00000490883 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
SEMA3A-207ENST00000490883 GPSM3Q9Y4H4 160 aa9.39□□□□□ -0.91
SEMA3A-207ENST00000490883 RNF217Q8TC41 542 aa9.38□□□□□ -0.91
SEMA3A-207ENST00000490883 NBPF20Q3BBV1 942 aa9.37□□□□□ -0.91
SEMA3A-207ENST00000490883 NANOS1Q8WY41 292 aaKnown RBP9.37□□□□□ -0.91
SEMA3A-207ENST00000490883 SENP3-EIF4A1A0A087X0R7 540 aa9.36□□□□□ -0.91
SEMA3A-207ENST00000490883 CDC14CA4D256 554 aa9.36□□□□□ -0.91
SEMA3A-207ENST00000490883 ITGA6P23229 1130 aa9.36□□□□□ -0.91
SEMA3A-207ENST00000490883 GSK3AP49840 483 aa9.36□□□□□ -0.91
SEMA3A-207ENST00000490883 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
SEMA3A-207ENST00000490883 ADH1AP07327 375 aa9.35□□□□□ -0.91
SEMA3A-207ENST00000490883 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
SEMA3A-207ENST00000490883 ESPNB1AK53 854 aa9.34□□□□□ -0.91
SEMA3A-207ENST00000490883 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
SEMA3A-207ENST00000490883 PTGIRP43119 386 aa9.33□□□□□ -0.92
SEMA3A-207ENST00000490883 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
SEMA3A-207ENST00000490883 GIGYF1O75420 1035 aaPredicted RBP9.32□□□□□ -0.92
SEMA3A-207ENST00000490883 ZNF385CQ66K41 422 aaPredicted RBP9.32□□□□□ -0.92
SEMA3A-207ENST00000490883 CUEDC1Q9NWM3 386 aaPredicted RBP9.32□□□□□ -0.92
SEMA3A-207ENST00000490883 ADAMTS8Q9UP79 889 aa9.32□□□□□ -0.92
SEMA3A-207ENST00000490883 SV2AQ7L0J3 742 aa9.31□□□□□ -0.92
SEMA3A-207ENST00000490883 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
SEMA3A-207ENST00000490883 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
SEMA3A-207ENST00000490883 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
SEMA3A-207ENST00000490883 RHOQP17081 205 aa9.3□□□□□ -0.92
SEMA3A-207ENST00000490883 KCNMA1Q12791 1236 aa9.3□□□□□ -0.92
SEMA3A-207ENST00000490883 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
SEMA3A-207ENST00000490883 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
SEMA3A-207ENST00000490883 FBXO45P0C2W1 286 aa9.29□□□□□ -0.92
SEMA3A-207ENST00000490883 PCDHB9Q9Y5E1 797 aa9.29□□□□□ -0.92
SEMA3A-207ENST00000490883 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
SEMA3A-207ENST00000490883 SVOPQ8N4V2 548 aa9.28□□□□□ -0.92
SEMA3A-207ENST00000490883 ZBBXA8MT70 800 aa9.27□□□□□ -0.93
SEMA3A-207ENST00000490883 NEUROD2Q15784 382 aa9.27□□□□□ -0.93
SEMA3A-207ENST00000490883 TMEM259Q4ZIN3 620 aa9.27□□□□□ -0.93
SEMA3A-207ENST00000490883 SLURP2P0DP57 97 aa9.26□□□□□ -0.93
SEMA3A-207ENST00000490883 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms