RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TCP11L2Q8N4U5 519 aa21.26■□□□□ 0.99
COL27A1-206ENST00000490831 CRB1P82279 1406 aa21.26■□□□□ 0.99
COL27A1-206ENST00000490831 A0A0G2JS52 829 aa21.25■□□□□ 0.99
COL27A1-206ENST00000490831 MYT1Q01538 1121 aa21.25■□□□□ 0.99
COL27A1-206ENST00000490831 BLMP54132 1417 aaPredicted RBP21.24■□□□□ 0.99
COL27A1-206ENST00000490831 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
COL27A1-206ENST00000490831 SOX12O15370 315 aa21.23■□□□□ 0.99
COL27A1-206ENST00000490831 EIF4G2P78344 907 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL27A1-206ENST00000490831 MYOM1P52179 1685 aa21.23■□□□□ 0.99
COL27A1-206ENST00000490831 WDR17Q8IZU2 1322 aa21.23■□□□□ 0.99
COL27A1-206ENST00000490831 USP35Q9P2H5 1018 aa21.22■□□□□ 0.99
COL27A1-206ENST00000490831 RGPD5Q99666 1765 aa21.2■□□□□ 0.99
COL27A1-206ENST00000490831 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.98
COL27A1-206ENST00000490831 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
COL27A1-206ENST00000490831 LTN1O94822 1766 aa21.18■□□□□ 0.98
COL27A1-206ENST00000490831 TOM1L2Q6ZVM7 507 aa21.18■□□□□ 0.98
COL27A1-206ENST00000490831 COG3Q96JB2 828 aa21.18■□□□□ 0.98
COL27A1-206ENST00000490831 FYB1O15117 783 aa21.17■□□□□ 0.98
COL27A1-206ENST00000490831 CARD10Q9BWT7 1032 aa21.17■□□□□ 0.98
COL27A1-206ENST00000490831 CARD14Q9BXL6 1004 aa21.16■□□□□ 0.98
COL27A1-206ENST00000490831 ERBB3P21860 1342 aa21.15■□□□□ 0.98
COL27A1-206ENST00000490831 FAM182BQ5T319 152 aa21.14■□□□□ 0.97
COL27A1-206ENST00000490831 DISP2A7MBM2 1401 aa21.13■□□□□ 0.97
COL27A1-206ENST00000490831 WNK3Q9BYP7 1800 aa21.13■□□□□ 0.97
COL27A1-206ENST00000490831 CCDC7Q96M83 1385 aa21.13■□□□□ 0.97
COL27A1-206ENST00000490831 FAM196AQ6ZSG2 479 aa21.13■□□□□ 0.97
COL27A1-206ENST00000490831 IP6K1Q92551 441 aa21.13■□□□□ 0.97
COL27A1-206ENST00000490831 CDCA7Q9BWT1 371 aaPredicted RBP21.13■□□□□ 0.97
COL27A1-206ENST00000490831 CSB-PGBD3P0DP91 1061 aa21.12■□□□□ 0.97
COL27A1-206ENST00000490831 PDE3BQ13370 1112 aa21.12■□□□□ 0.97
COL27A1-206ENST00000490831 SF3B2Q13435 895 aaKnown RBP21.12■□□□□ 0.97
COL27A1-206ENST00000490831 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
COL27A1-206ENST00000490831 KIF20BQ96Q89 1820 aa21.11■□□□□ 0.97
COL27A1-206ENST00000490831 MAP3K19Q56UN5 1328 aa21.11■□□□□ 0.97
COL27A1-206ENST00000490831 GGNBP2Q9H3C7 697 aa21.11■□□□□ 0.97
COL27A1-206ENST00000490831 RGPD1P0DJD0 1748 aa21.11■□□□□ 0.97
COL27A1-206ENST00000490831 NSD3Q9BZ95 1437 aa21.11■□□□□ 0.97
COL27A1-206ENST00000490831 DEFB132Q7Z7B7 95 aa21.09■□□□□ 0.97
COL27A1-206ENST00000490831 ANKRD24Q8TF21 1146 aa21.09■□□□□ 0.97
COL27A1-206ENST00000490831 RTL1A6NKG5 1358 aa21.09■□□□□ 0.97
COL27A1-206ENST00000490831 C11orf95C9JLR9 678 aaPredicted RBP21.08■□□□□ 0.97
COL27A1-206ENST00000490831 PEAK1Q9H792 1746 aa21.07■□□□□ 0.96
COL27A1-206ENST00000490831 TNS1Q9HBL0 1735 aaKnown RBP21.07■□□□□ 0.96
COL27A1-206ENST00000490831 FBLN1P23142 703 aa21.07■□□□□ 0.96
COL27A1-206ENST00000490831 HOXC9P31274 260 aa21.07■□□□□ 0.96
COL27A1-206ENST00000490831 DDB1Q16531 1140 aa21.07■□□□□ 0.96
COL27A1-206ENST00000490831 BAG6P46379 1132 aa21.06■□□□□ 0.96
COL27A1-206ENST00000490831 FAM208AQ9UK61 1670 aaKnown RBP21.05■□□□□ 0.96
COL27A1-206ENST00000490831 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
COL27A1-206ENST00000490831 OVOS2A0A0G2JMS6 1433 aa21.05■□□□□ 0.96
COL27A1-206ENST00000490831 BCL9O00512 1426 aa21.05■□□□□ 0.96
COL27A1-206ENST00000490831 NLRP2Q9NX02 1062 aa21.05■□□□□ 0.96
COL27A1-206ENST00000490831 AMPHP49418 695 aa21.04■□□□□ 0.96
COL27A1-206ENST00000490831 KIF24Q5T7B8 1368 aa21.04■□□□□ 0.96
COL27A1-206ENST00000490831 TRIM37O94972 964 aa21.03■□□□□ 0.96
COL27A1-206ENST00000490831 RRS1Q15050 365 aaKnown RBP21.03■□□□□ 0.96
COL27A1-206ENST00000490831 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
COL27A1-206ENST00000490831 TNS2Q63HR2 1409 aa21.03■□□□□ 0.96
COL27A1-206ENST00000490831 EXOC5O00471 708 aa21.01■□□□□ 0.95
COL27A1-206ENST00000490831 MARCH10Q8NA82 808 aaPredicted RBP21.01■□□□□ 0.95
COL27A1-206ENST00000490831 IL2RBP14784 551 aa21■□□□□ 0.95
COL27A1-206ENST00000490831 PANK3Q9H999 370 aa21■□□□□ 0.95
COL27A1-206ENST00000490831 INSRP06213 1382 aa20.99■□□□□ 0.95
COL27A1-206ENST00000490831 FLT4P35916 1363 aa20.99■□□□□ 0.95
COL27A1-206ENST00000490831 EN1Q05925 392 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-206ENST00000490831 SBF2Q86WG5 1849 aa20.99■□□□□ 0.95
COL27A1-206ENST00000490831 PARD3Q8TEW0 1356 aa20.98■□□□□ 0.95
COL27A1-206ENST00000490831 LTV1Q96GA3 475 aaPredicted RBP20.98■□□□□ 0.95
COL27A1-206ENST00000490831 CAMKK2Q96RR4 588 aa20.98■□□□□ 0.95
COL27A1-206ENST00000490831 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
COL27A1-206ENST00000490831 ANKRD26Q9UPS8 1709 aa20.98■□□□□ 0.95
COL27A1-206ENST00000490831 NSD2O96028 1365 aa20.97■□□□□ 0.95
COL27A1-206ENST00000490831 APBA3O96018 575 aa20.96■□□□□ 0.95
COL27A1-206ENST00000490831 HSP90AB2PQ58FF8 381 aa20.95■□□□□ 0.94
COL27A1-206ENST00000490831 SMG6Q86US8 1419 aaKnown RBP20.95■□□□□ 0.94
COL27A1-206ENST00000490831 EZH2Q15910 746 aaKnown RBP20.94■□□□□ 0.94
COL27A1-206ENST00000490831 BCL11BQ9C0K0 894 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-206ENST00000490831 EMILIN1Q9Y6C2 1016 aa20.94■□□□□ 0.94
COL27A1-206ENST00000490831 RGPD2P0DJD1 1756 aa20.94■□□□□ 0.94
COL27A1-206ENST00000490831 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
COL27A1-206ENST00000490831 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
COL27A1-206ENST00000490831 RREB1Q92766 1687 aa20.92■□□□□ 0.94
COL27A1-206ENST00000490831 RGPD3A6NKT7 1758 aaPredicted RBP20.91■□□□□ 0.94
COL27A1-206ENST00000490831 MAP2P11137 1827 aaKnown RBP20.91■□□□□ 0.94
COL27A1-206ENST00000490831 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
COL27A1-206ENST00000490831 RGPD4Q7Z3J3 1758 aa20.91■□□□□ 0.94
COL27A1-206ENST00000490831 POLKQ9UBT6 870 aa20.91■□□□□ 0.94
COL27A1-206ENST00000490831 PLSCR1O15162 318 aa20.9■□□□□ 0.94
COL27A1-206ENST00000490831 MEGF6O75095 1541 aa20.89■□□□□ 0.94
COL27A1-206ENST00000490831 NCAPD2Q15021 1401 aa20.89■□□□□ 0.94
COL27A1-206ENST00000490831 PTF1AQ7RTS3 328 aa20.89■□□□□ 0.93
COL27A1-206ENST00000490831 SRCAPQ6ZRS2 3230 aa20.88■□□□□ 0.93
COL27A1-206ENST00000490831 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
COL27A1-206ENST00000490831 NHSQ6T4R5 1651 aa20.87■□□□□ 0.93
COL27A1-206ENST00000490831 AMER1Q5JTC6 1135 aaPredicted RBP20.87■□□□□ 0.93
COL27A1-206ENST00000490831 NUP188Q5SRE5 1749 aa20.86■□□□□ 0.93
COL27A1-206ENST00000490831 SHANK3Q9BYB0 1731 aa20.85■□□□□ 0.93
COL27A1-206ENST00000490831 PPM1GO15355 546 aaPredicted RBP20.85■□□□□ 0.93
COL27A1-206ENST00000490831 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
COL27A1-206ENST00000490831 USHBP1Q8N6Y0 703 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 204.6 ms