RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 LARP1Q6PKG0 1096 aaKnown RBP21.33■■□□□ 1.01
VPS26A-207ENST00000490696 SEPT12Q8IYM1 358 aa21.33■■□□□ 1.01
VPS26A-207ENST00000490696 COG3Q96JB2 828 aa21.33■■□□□ 1.01
VPS26A-207ENST00000490696 FAM98CQ17RN3 349 aaKnown RBP21.32■■□□□ 1
VPS26A-207ENST00000490696 NSD3Q9BZ95 1437 aa21.31■■□□□ 1
VPS26A-207ENST00000490696 ABCC6O95255 1503 aa21.31■■□□□ 1
VPS26A-207ENST00000490696 PIAS4Q8N2W9 510 aaPredicted RBP21.3■■□□□ 1
VPS26A-207ENST00000490696 GGNBP2Q9H3C7 697 aa21.3■■□□□ 1
VPS26A-207ENST00000490696 USP35Q9P2H5 1018 aa21.28■■□□□ 1
VPS26A-207ENST00000490696 KIF7Q2M1P5 1343 aa21.28■■□□□ 1
VPS26A-207ENST00000490696 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
VPS26A-207ENST00000490696 BRWD3Q6RI45 1802 aa21.27■■□□□ 1
VPS26A-207ENST00000490696 BARGINQ6ZT62 677 aa21.27■■□□□ 1
VPS26A-207ENST00000490696 LTN1O94822 1766 aa21.27■■□□□ 1
VPS26A-207ENST00000490696 RGPD5Q99666 1765 aa21.27■■□□□ 1
VPS26A-207ENST00000490696 CRB1P82279 1406 aa21.27■■□□□ 1
VPS26A-207ENST00000490696 KIF20BQ96Q89 1820 aa21.27■□□□□ 0.99
VPS26A-207ENST00000490696 WDR17Q8IZU2 1322 aa21.27■□□□□ 0.99
VPS26A-207ENST00000490696 TCP11L2Q8N4U5 519 aa21.26■□□□□ 0.99
VPS26A-207ENST00000490696 PANK3Q9H999 370 aa21.26■□□□□ 0.99
VPS26A-207ENST00000490696 A0A0G2JS52 829 aa21.25■□□□□ 0.99
VPS26A-207ENST00000490696 FBLN1P23142 703 aa21.25■□□□□ 0.99
VPS26A-207ENST00000490696 MYT1Q01538 1121 aa21.25■□□□□ 0.99
VPS26A-207ENST00000490696 EP400Q96L91 3159 aa21.24■□□□□ 0.99
VPS26A-207ENST00000490696 THRAP3Q9Y2W1 955 aaKnown RBP21.24■□□□□ 0.99
VPS26A-207ENST00000490696 CGNL1Q0VF96 1302 aa21.24■□□□□ 0.99
VPS26A-207ENST00000490696 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
VPS26A-207ENST00000490696 TOM1L2Q6ZVM7 507 aa21.23■□□□□ 0.99
VPS26A-207ENST00000490696 KRT27Q7Z3Y8 459 aa21.23■□□□□ 0.99
VPS26A-207ENST00000490696 IP6K1Q92551 441 aa21.22■□□□□ 0.99
VPS26A-207ENST00000490696 ERBB3P21860 1342 aa21.22■□□□□ 0.99
VPS26A-207ENST00000490696 CSB-PGBD3P0DP91 1061 aa21.21■□□□□ 0.99
VPS26A-207ENST00000490696 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
VPS26A-207ENST00000490696 CARD10Q9BWT7 1032 aa21.2■□□□□ 0.98
VPS26A-207ENST00000490696 RRS1Q15050 365 aaKnown RBP21.19■□□□□ 0.98
VPS26A-207ENST00000490696 CCDC7Q96M83 1385 aa21.19■□□□□ 0.98
VPS26A-207ENST00000490696 HOXC9P31274 260 aa21.18■□□□□ 0.98
VPS26A-207ENST00000490696 ANKRD24Q8TF21 1146 aa21.18■□□□□ 0.98
VPS26A-207ENST00000490696 AMPHP49418 695 aa21.17■□□□□ 0.98
VPS26A-207ENST00000490696 WASHC2AQ641Q2 1341 aa21.17■□□□□ 0.98
VPS26A-207ENST00000490696 RTL1A6NKG5 1358 aa21.17■□□□□ 0.98
VPS26A-207ENST00000490696 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
VPS26A-207ENST00000490696 NLRP2Q9NX02 1062 aa21.14■□□□□ 0.97
VPS26A-207ENST00000490696 DISP2A7MBM2 1401 aa21.13■□□□□ 0.97
VPS26A-207ENST00000490696 NSD2O96028 1365 aa21.13■□□□□ 0.97
VPS26A-207ENST00000490696 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
VPS26A-207ENST00000490696 ANKRD26Q9UPS8 1709 aa21.13■□□□□ 0.97
VPS26A-207ENST00000490696 FAM182BQ5T319 152 aa21.13■□□□□ 0.97
VPS26A-207ENST00000490696 WNK3Q9BYP7 1800 aa21.13■□□□□ 0.97
VPS26A-207ENST00000490696 PEAK1Q9H792 1746 aa21.12■□□□□ 0.97
VPS26A-207ENST00000490696 CCDC125Q86Z20 511 aa21.12■□□□□ 0.97
VPS26A-207ENST00000490696 LTV1Q96GA3 475 aaPredicted RBP21.12■□□□□ 0.97
VPS26A-207ENST00000490696 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
VPS26A-207ENST00000490696 KNSTRNQ9Y448 316 aa21.12■□□□□ 0.97
VPS26A-207ENST00000490696 FLT4P35916 1363 aa21.11■□□□□ 0.97
VPS26A-207ENST00000490696 SRCAPQ6ZRS2 3230 aa21.11■□□□□ 0.97
VPS26A-207ENST00000490696 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
VPS26A-207ENST00000490696 EMILIN1Q9Y6C2 1016 aa21.11■□□□□ 0.97
VPS26A-207ENST00000490696 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
VPS26A-207ENST00000490696 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
VPS26A-207ENST00000490696 HSP90AB2PQ58FF8 381 aa21.1■□□□□ 0.97
VPS26A-207ENST00000490696 AMER1Q5JTC6 1135 aaPredicted RBP21.1■□□□□ 0.97
VPS26A-207ENST00000490696 INSRP06213 1382 aa21.1■□□□□ 0.97
VPS26A-207ENST00000490696 FAM208AQ9UK61 1670 aaKnown RBP21.09■□□□□ 0.97
VPS26A-207ENST00000490696 DDB1Q16531 1140 aa21.09■□□□□ 0.97
VPS26A-207ENST00000490696 FAM196AQ6ZSG2 479 aa21.08■□□□□ 0.97
VPS26A-207ENST00000490696 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
VPS26A-207ENST00000490696 MAP2P11137 1827 aaKnown RBP21.07■□□□□ 0.96
VPS26A-207ENST00000490696 TNNT2P45379 298 aaPredicted RBP21.07■□□□□ 0.96
VPS26A-207ENST00000490696 IL2RBP14784 551 aa21.05■□□□□ 0.96
VPS26A-207ENST00000490696 MORC1Q86VD1 984 aa21.05■□□□□ 0.96
VPS26A-207ENST00000490696 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
VPS26A-207ENST00000490696 PPM1GO15355 546 aaPredicted RBP21.04■□□□□ 0.96
VPS26A-207ENST00000490696 NBPF6Q5VWK0 638 aa21.04■□□□□ 0.96
VPS26A-207ENST00000490696 NBPF4Q96M43 638 aa21.04■□□□□ 0.96
VPS26A-207ENST00000490696 RGPD2P0DJD1 1756 aa21.04■□□□□ 0.96
VPS26A-207ENST00000490696 TNS2Q63HR2 1409 aa21.04■□□□□ 0.96
VPS26A-207ENST00000490696 EXOC5O00471 708 aa21.03■□□□□ 0.96
VPS26A-207ENST00000490696 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
VPS26A-207ENST00000490696 OVOS2A0A0G2JMS6 1433 aa21.03■□□□□ 0.96
VPS26A-207ENST00000490696 SF3B2Q13435 895 aaKnown RBP21.02■□□□□ 0.96
VPS26A-207ENST00000490696 NPC1L1Q9UHC9 1359 aa21■□□□□ 0.95
VPS26A-207ENST00000490696 TRIM37O94972 964 aa21■□□□□ 0.95
VPS26A-207ENST00000490696 DEFB132Q7Z7B7 95 aa21■□□□□ 0.95
VPS26A-207ENST00000490696 BCL9O00512 1426 aa21■□□□□ 0.95
VPS26A-207ENST00000490696 RGPD1P0DJD0 1748 aa21■□□□□ 0.95
VPS26A-207ENST00000490696 USHBP1Q8N6Y0 703 aa20.99■□□□□ 0.95
VPS26A-207ENST00000490696 TNS1Q9HBL0 1735 aaKnown RBP20.98■□□□□ 0.95
VPS26A-207ENST00000490696 CC2D1BQ5T0F9 858 aaKnown RBP20.98■□□□□ 0.95
VPS26A-207ENST00000490696 MEGF6O75095 1541 aa20.98■□□□□ 0.95
VPS26A-207ENST00000490696 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
VPS26A-207ENST00000490696 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
VPS26A-207ENST00000490696 BAG6P46379 1132 aa20.96■□□□□ 0.95
VPS26A-207ENST00000490696 EIF4A2Q14240 407 aaKnown RBP20.95■□□□□ 0.94
VPS26A-207ENST00000490696 EYA1Q99502 592 aa20.94■□□□□ 0.94
VPS26A-207ENST00000490696 SBF2Q86WG5 1849 aa20.94■□□□□ 0.94
VPS26A-207ENST00000490696 EN1Q05925 392 aaPredicted RBP20.92■□□□□ 0.94
VPS26A-207ENST00000490696 ZCRB1Q8TBF4 217 aaKnown RBP20.92■□□□□ 0.94
VPS26A-207ENST00000490696 RAPGEF4Q8WZA2 1011 aa20.92■□□□□ 0.94
VPS26A-207ENST00000490696 APBA3O96018 575 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms