RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 RGPD3A6NKT7 1758 aaPredicted RBP22.35■■□□□ 1.17
COL2A1-207ENST00000490609 RGPD4Q7Z3J3 1758 aa22.35■■□□□ 1.17
COL2A1-207ENST00000490609 ZNF692Q9BU19 519 aaPredicted RBP22.35■■□□□ 1.17
COL2A1-207ENST00000490609 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
COL2A1-207ENST00000490609 WDR17Q8IZU2 1322 aa22.34■■□□□ 1.17
COL2A1-207ENST00000490609 USP54Q70EL1 1684 aa22.33■■□□□ 1.17
COL2A1-207ENST00000490609 MARCH10Q8NA82 808 aaPredicted RBP22.33■■□□□ 1.17
COL2A1-207ENST00000490609 OVOS2A0A0G2JMS6 1433 aa22.32■■□□□ 1.16
COL2A1-207ENST00000490609 OVOS2A0A0J9YW53 1432 aa22.32■■□□□ 1.16
COL2A1-207ENST00000490609 OVOS2Q6IE36 1432 aa22.32■■□□□ 1.16
COL2A1-207ENST00000490609 TOM1L2Q6ZVM7 507 aa22.32■■□□□ 1.16
COL2A1-207ENST00000490609 PROM2Q8N271 834 aa22.31■■□□□ 1.16
COL2A1-207ENST00000490609 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
COL2A1-207ENST00000490609 DDB1Q16531 1140 aa22.3■■□□□ 1.16
COL2A1-207ENST00000490609 SBNO2Q9Y2G9 1366 aa22.29■■□□□ 1.16
COL2A1-207ENST00000490609 LTN1O94822 1766 aa22.29■■□□□ 1.16
COL2A1-207ENST00000490609 BCL9O00512 1426 aa22.29■■□□□ 1.16
COL2A1-207ENST00000490609 KTN1Q86UP2 1357 aaKnown RBP22.28■■□□□ 1.16
COL2A1-207ENST00000490609 PLSCR1O15162 318 aa22.28■■□□□ 1.16
COL2A1-207ENST00000490609 SOX12O15370 315 aa22.28■■□□□ 1.16
COL2A1-207ENST00000490609 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
COL2A1-207ENST00000490609 CARD10Q9BWT7 1032 aa22.28■■□□□ 1.16
COL2A1-207ENST00000490609 CASZ1Q86V15 1759 aa22.27■■□□□ 1.16
COL2A1-207ENST00000490609 USP31Q70CQ4 1352 aa22.27■■□□□ 1.16
COL2A1-207ENST00000490609 BCL11BQ9C0K0 894 aaPredicted RBP22.26■■□□□ 1.15
COL2A1-207ENST00000490609 ANO8Q9HCE9 1232 aaPredicted RBP22.26■■□□□ 1.15
COL2A1-207ENST00000490609 C11orf95C9JLR9 678 aaPredicted RBP22.25■■□□□ 1.15
COL2A1-207ENST00000490609 NBPF14Q5TI25 921 aa22.24■■□□□ 1.15
COL2A1-207ENST00000490609 PDGFDQ9GZP0 370 aaPredicted RBP22.24■■□□□ 1.15
COL2A1-207ENST00000490609 ABCC6O95255 1503 aa22.24■■□□□ 1.15
COL2A1-207ENST00000490609 NME9Q86XW9 330 aa22.23■■□□□ 1.15
COL2A1-207ENST00000490609 SLC12A5Q9H2X9 1139 aa22.23■■□□□ 1.15
COL2A1-207ENST00000490609 UTRNP46939 3433 aa22.23■■□□□ 1.15
COL2A1-207ENST00000490609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
COL2A1-207ENST00000490609 CDCA7Q9BWT1 371 aaPredicted RBP22.22■■□□□ 1.15
COL2A1-207ENST00000490609 KAT6BQ8WYB5 2073 aa22.2■■□□□ 1.14
COL2A1-207ENST00000490609 CARD11Q9BXL7 1154 aa22.2■■□□□ 1.14
COL2A1-207ENST00000490609 KCNQ2O43526 872 aa22.18■■□□□ 1.14
COL2A1-207ENST00000490609 CSB-PGBD3P0DP91 1061 aa22.18■■□□□ 1.14
COL2A1-207ENST00000490609 NHSQ6T4R5 1651 aa22.17■■□□□ 1.14
COL2A1-207ENST00000490609 CCDC7Q96M83 1385 aa22.17■■□□□ 1.14
COL2A1-207ENST00000490609 ERBB3P21860 1342 aa22.17■■□□□ 1.14
COL2A1-207ENST00000490609 TNS2Q63HR2 1409 aa22.16■■□□□ 1.14
COL2A1-207ENST00000490609 EXOC5O00471 708 aa22.16■■□□□ 1.14
COL2A1-207ENST00000490609 SPON1Q9HCB6 807 aa22.16■■□□□ 1.14
COL2A1-207ENST00000490609 A0A1W2PP64 1363 aa22.15■■□□□ 1.14
COL2A1-207ENST00000490609 TESK2Q96S53 571 aa22.15■■□□□ 1.14
COL2A1-207ENST00000490609 TMC1Q8TDI8 760 aa22.14■■□□□ 1.13
COL2A1-207ENST00000490609 BTAF1O14981 1849 aa22.14■■□□□ 1.13
COL2A1-207ENST00000490609 RGPD2P0DJD1 1756 aa22.14■■□□□ 1.13
COL2A1-207ENST00000490609 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.13
COL2A1-207ENST00000490609 TXNRD1Q16881 649 aa22.13■■□□□ 1.13
COL2A1-207ENST00000490609 PUS7Q96PZ0 661 aaKnown RBP22.12■■□□□ 1.13
COL2A1-207ENST00000490609 PAPPAQ13219 1627 aa22.11■■□□□ 1.13
COL2A1-207ENST00000490609 PTGER2P43116 358 aa22.11■■□□□ 1.13
COL2A1-207ENST00000490609 MYOM1P52179 1685 aa22.11■■□□□ 1.13
COL2A1-207ENST00000490609 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
COL2A1-207ENST00000490609 NLRP2Q9NX02 1062 aa22.1■■□□□ 1.13
COL2A1-207ENST00000490609 FBLN1P23142 703 aa22.09■■□□□ 1.13
COL2A1-207ENST00000490609 ACSBG1Q96GR2 724 aa22.09■■□□□ 1.13
COL2A1-207ENST00000490609 ST20-MTHFSA0A0A6YYL1 179 aa22.08■■□□□ 1.13
COL2A1-207ENST00000490609 HDGFL2Q7Z4V5 671 aaPredicted RBP22.08■■□□□ 1.13
COL2A1-207ENST00000490609 SHANK3Q9BYB0 1731 aa22.08■■□□□ 1.12
COL2A1-207ENST00000490609 ZBTB7AO95365 584 aa22.07■■□□□ 1.12
COL2A1-207ENST00000490609 IL2RBP14784 551 aa22.07■■□□□ 1.12
COL2A1-207ENST00000490609 SLC15A2Q16348 729 aa22.07■■□□□ 1.12
COL2A1-207ENST00000490609 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
COL2A1-207ENST00000490609 NINLQ9Y2I6 1382 aa22.07■■□□□ 1.12
COL2A1-207ENST00000490609 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
COL2A1-207ENST00000490609 IP6K1Q92551 441 aa22.06■■□□□ 1.12
COL2A1-207ENST00000490609 SGIP1Q9BQI5 828 aa22.05■■□□□ 1.12
COL2A1-207ENST00000490609 TERF2IPQ9NYB0 399 aa22.05■■□□□ 1.12
COL2A1-207ENST00000490609 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
COL2A1-207ENST00000490609 PPP1R1BQ9UD71 204 aaPredicted RBP22.04■■□□□ 1.12
COL2A1-207ENST00000490609 LRRC4BQ9NT99 713 aa22.03■■□□□ 1.12
COL2A1-207ENST00000490609 ATF5Q9Y2D1 282 aaPredicted RBP22.03■■□□□ 1.12
COL2A1-207ENST00000490609 STK32BQ9NY57 414 aa22.01■■□□□ 1.11
COL2A1-207ENST00000490609 MAP3K19Q56UN5 1328 aa22.01■■□□□ 1.11
COL2A1-207ENST00000490609 TUBGCP6Q96RT7 1819 aa22.01■■□□□ 1.11
COL2A1-207ENST00000490609 ZNF827Q17R98 1081 aa22■■□□□ 1.11
COL2A1-207ENST00000490609 HOXC9P31274 260 aa21.99■■□□□ 1.11
COL2A1-207ENST00000490609 COL24A1Q17RW2 1714 aa21.99■■□□□ 1.11
COL2A1-207ENST00000490609 QSER1Q2KHR3 1735 aa21.98■■□□□ 1.11
COL2A1-207ENST00000490609 YY1P25490 414 aa21.98■■□□□ 1.11
COL2A1-207ENST00000490609 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
COL2A1-207ENST00000490609 LY75O60449 1722 aa21.97■■□□□ 1.11
COL2A1-207ENST00000490609 DOT1LQ8TEK3 1739 aa21.97■■□□□ 1.11
COL2A1-207ENST00000490609 FYB1O15117 783 aa21.95■■□□□ 1.1
COL2A1-207ENST00000490609 MTFR1LQ9H019 292 aa21.95■■□□□ 1.1
COL2A1-207ENST00000490609 NSD2O96028 1365 aa21.95■■□□□ 1.1
COL2A1-207ENST00000490609 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
COL2A1-207ENST00000490609 MEGF6O75095 1541 aa21.95■■□□□ 1.1
COL2A1-207ENST00000490609 DDX54Q8TDD1 881 aaKnown RBP21.94■■□□□ 1.1
COL2A1-207ENST00000490609 AKT1S1Q96B36 256 aa21.94■■□□□ 1.1
COL2A1-207ENST00000490609 COG3Q96JB2 828 aa21.94■■□□□ 1.1
COL2A1-207ENST00000490609 SYT17Q9BSW7 474 aa21.94■■□□□ 1.1
COL2A1-207ENST00000490609 FHDC1Q9C0D6 1143 aaPredicted RBP21.94■■□□□ 1.1
COL2A1-207ENST00000490609 CHD4Q14839 1912 aa21.92■■□□□ 1.1
COL2A1-207ENST00000490609 KCNQ4P56696 695 aa21.92■■□□□ 1.1
COL2A1-207ENST00000490609 RRS1Q15050 365 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms