RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TCP11L2Q8N4U5 519 aa21.57■■□□□ 1.04
PCCB-218ENST00000490504 COL5A2P05997 1499 aaPredicted RBP21.57■■□□□ 1.04
PCCB-218ENST00000490504 A0A1W2PP64 1363 aa21.56■■□□□ 1.04
PCCB-218ENST00000490504 USP31Q70CQ4 1352 aa21.56■■□□□ 1.04
PCCB-218ENST00000490504 DEFB132Q7Z7B7 95 aa21.55■■□□□ 1.04
PCCB-218ENST00000490504 THSD7AQ9UPZ6 1657 aa21.55■■□□□ 1.04
PCCB-218ENST00000490504 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
PCCB-218ENST00000490504 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
PCCB-218ENST00000490504 TMF1P82094 1093 aa21.53■■□□□ 1.04
PCCB-218ENST00000490504 SF3B2Q13435 895 aaKnown RBP21.53■■□□□ 1.04
PCCB-218ENST00000490504 THRAP3Q9Y2W1 955 aaKnown RBP21.52■■□□□ 1.04
PCCB-218ENST00000490504 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.04
PCCB-218ENST00000490504 CRB1P82279 1406 aa21.52■■□□□ 1.04
PCCB-218ENST00000490504 NINLQ9Y2I6 1382 aa21.51■■□□□ 1.03
PCCB-218ENST00000490504 TOM1L2Q6ZVM7 507 aa21.51■■□□□ 1.03
PCCB-218ENST00000490504 NFAT5O94916 1531 aa21.5■■□□□ 1.03
PCCB-218ENST00000490504 PDE3BQ13370 1112 aa21.49■■□□□ 1.03
PCCB-218ENST00000490504 WDR17Q8IZU2 1322 aa21.49■■□□□ 1.03
PCCB-218ENST00000490504 ANP32CO43423 234 aa21.48■■□□□ 1.03
PCCB-218ENST00000490504 COL18A1P39060 1754 aa21.48■■□□□ 1.03
PCCB-218ENST00000490504 FAM196AQ6ZSG2 479 aa21.47■■□□□ 1.03
PCCB-218ENST00000490504 CSB-PGBD3P0DP91 1061 aa21.46■■□□□ 1.03
PCCB-218ENST00000490504 ANKRD36BQ8N2N9 1353 aa21.45■■□□□ 1.02
PCCB-218ENST00000490504 OVOS2A0A0J9YW53 1432 aa21.45■■□□□ 1.02
PCCB-218ENST00000490504 OVOS2Q6IE36 1432 aa21.45■■□□□ 1.02
PCCB-218ENST00000490504 BAG6P46379 1132 aa21.44■■□□□ 1.02
PCCB-218ENST00000490504 TRIM37O94972 964 aa21.44■■□□□ 1.02
PCCB-218ENST00000490504 CDCA8Q53HL2 280 aa21.44■■□□□ 1.02
PCCB-218ENST00000490504 CARD10Q9BWT7 1032 aa21.44■■□□□ 1.02
PCCB-218ENST00000490504 EN1Q05925 392 aaPredicted RBP21.43■■□□□ 1.02
PCCB-218ENST00000490504 COG3Q96JB2 828 aa21.41■■□□□ 1.02
PCCB-218ENST00000490504 USP54Q70EL1 1684 aa21.41■■□□□ 1.02
PCCB-218ENST00000490504 FBLN1P23142 703 aa21.4■■□□□ 1.02
PCCB-218ENST00000490504 DDB1Q16531 1140 aa21.4■■□□□ 1.02
PCCB-218ENST00000490504 FYB1O15117 783 aa21.39■■□□□ 1.01
PCCB-218ENST00000490504 ERBB3P21860 1342 aa21.38■■□□□ 1.01
PCCB-218ENST00000490504 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
PCCB-218ENST00000490504 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
PCCB-218ENST00000490504 ABCC6O95255 1503 aa21.38■■□□□ 1.01
PCCB-218ENST00000490504 ANKRD24Q8TF21 1146 aa21.37■■□□□ 1.01
PCCB-218ENST00000490504 CDCA7Q9BWT1 371 aaPredicted RBP21.37■■□□□ 1.01
PCCB-218ENST00000490504 GGNBP2Q9H3C7 697 aa21.37■■□□□ 1.01
PCCB-218ENST00000490504 SRCAPQ6ZRS2 3230 aa21.37■■□□□ 1.01
PCCB-218ENST00000490504 APBA3O96018 575 aa21.37■■□□□ 1.01
PCCB-218ENST00000490504 IP6K1Q92551 441 aa21.37■■□□□ 1.01
PCCB-218ENST00000490504 CARD14Q9BXL6 1004 aa21.37■■□□□ 1.01
PCCB-218ENST00000490504 NLRP2Q9NX02 1062 aa21.37■■□□□ 1.01
PCCB-218ENST00000490504 EZH2Q15910 746 aaKnown RBP21.36■■□□□ 1.01
PCCB-218ENST00000490504 DISP2A7MBM2 1401 aa21.36■■□□□ 1.01
PCCB-218ENST00000490504 MAP3K19Q56UN5 1328 aa21.35■■□□□ 1.01
PCCB-218ENST00000490504 MARCH10Q8NA82 808 aaPredicted RBP21.35■■□□□ 1.01
PCCB-218ENST00000490504 YTHDC1Q96MU7 727 aaKnown RBP21.35■■□□□ 1.01
PCCB-218ENST00000490504 CAMKK2Q96RR4 588 aa21.35■■□□□ 1.01
PCCB-218ENST00000490504 RGPD5Q99666 1765 aa21.35■■□□□ 1.01
PCCB-218ENST00000490504 PARP4Q9UKK3 1724 aaKnown RBP21.35■■□□□ 1.01
PCCB-218ENST00000490504 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
PCCB-218ENST00000490504 RGPD1P0DJD0 1748 aa21.33■■□□□ 1.01
PCCB-218ENST00000490504 LTV1Q96GA3 475 aaPredicted RBP21.33■■□□□ 1
PCCB-218ENST00000490504 OVOS2A0A0G2JMS6 1433 aa21.32■■□□□ 1
PCCB-218ENST00000490504 EXOC5O00471 708 aa21.32■■□□□ 1
PCCB-218ENST00000490504 LRRC37A3O60309 1634 aa21.31■■□□□ 1
PCCB-218ENST00000490504 HOXC9P31274 260 aa21.31■■□□□ 1
PCCB-218ENST00000490504 AMPHP49418 695 aa21.31■■□□□ 1
PCCB-218ENST00000490504 RRS1Q15050 365 aaKnown RBP21.31■■□□□ 1
PCCB-218ENST00000490504 TNS1Q9HBL0 1735 aaKnown RBP21.3■■□□□ 1
PCCB-218ENST00000490504 PTF1AQ7RTS3 328 aa21.29■■□□□ 1
PCCB-218ENST00000490504 NSD3Q9BZ95 1437 aa21.29■■□□□ 1
PCCB-218ENST00000490504 LTN1O94822 1766 aa21.29■■□□□ 1
PCCB-218ENST00000490504 PSDA5PKW4 1024 aaPredicted RBP21.29■■□□□ 1
PCCB-218ENST00000490504 IL2RBP14784 551 aa21.29■■□□□ 1
PCCB-218ENST00000490504 PEAK1Q9H792 1746 aa21.27■□□□□ 0.99
PCCB-218ENST00000490504 PRKRIP1Q9H875 184 aaPredicted RBP21.26■□□□□ 0.99
PCCB-218ENST00000490504 BCL11BQ9C0K0 894 aaPredicted RBP21.26■□□□□ 0.99
PCCB-218ENST00000490504 PARD3Q8TEW0 1356 aa21.25■□□□□ 0.99
PCCB-218ENST00000490504 BCL9O00512 1426 aa21.25■□□□□ 0.99
PCCB-218ENST00000490504 TNS2Q63HR2 1409 aa21.25■□□□□ 0.99
PCCB-218ENST00000490504 MYOM1P52179 1685 aa21.25■□□□□ 0.99
PCCB-218ENST00000490504 R3HDM1Q15032 1099 aaKnown RBP21.24■□□□□ 0.99
PCCB-218ENST00000490504 WNK3Q9BYP7 1800 aa21.24■□□□□ 0.99
PCCB-218ENST00000490504 RTL1A6NKG5 1358 aa21.23■□□□□ 0.99
PCCB-218ENST00000490504 HSP90AB2PQ58FF8 381 aa21.21■□□□□ 0.99
PCCB-218ENST00000490504 CGNL1Q0VF96 1302 aa21.2■□□□□ 0.98
PCCB-218ENST00000490504 PLSCR1O15162 318 aa21.2■□□□□ 0.98
PCCB-218ENST00000490504 KCNQ2O43526 872 aa21.2■□□□□ 0.98
PCCB-218ENST00000490504 NBPF6Q5VWK0 638 aa21.2■□□□□ 0.98
PCCB-218ENST00000490504 NBPF4Q96M43 638 aa21.2■□□□□ 0.98
PCCB-218ENST00000490504 PANK3Q9H999 370 aa21.19■□□□□ 0.98
PCCB-218ENST00000490504 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
PCCB-218ENST00000490504 ACSBG1Q96GR2 724 aa21.18■□□□□ 0.98
PCCB-218ENST00000490504 USHBP1Q8N6Y0 703 aa21.18■□□□□ 0.98
PCCB-218ENST00000490504 INSRP06213 1382 aa21.17■□□□□ 0.98
PCCB-218ENST00000490504 DDX54Q8TDD1 881 aaKnown RBP21.17■□□□□ 0.98
PCCB-218ENST00000490504 FLT4P35916 1363 aa21.16■□□□□ 0.98
PCCB-218ENST00000490504 PROM2Q8N271 834 aa21.16■□□□□ 0.98
PCCB-218ENST00000490504 KIF20BQ96Q89 1820 aa21.15■□□□□ 0.98
PCCB-218ENST00000490504 NBPF14Q5TI25 921 aa21.15■□□□□ 0.98
PCCB-218ENST00000490504 KIF24Q5T7B8 1368 aa21.15■□□□□ 0.98
PCCB-218ENST00000490504 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
PCCB-218ENST00000490504 SBF2Q86WG5 1849 aa21.13■□□□□ 0.97
PCCB-218ENST00000490504 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms