RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
CDCP1-203ENST00000490471 TERF2IPQ9NYB0 399 aa16.01■□□□□ 0.15
CDCP1-203ENST00000490471 THSD7AQ9UPZ6 1657 aa16.01■□□□□ 0.15
CDCP1-203ENST00000490471 CRB1P82279 1406 aa16.01■□□□□ 0.15
CDCP1-203ENST00000490471 SBNO2Q9Y2G9 1366 aa16■□□□□ 0.15
CDCP1-203ENST00000490471 APBA3O96018 575 aa16■□□□□ 0.15
CDCP1-203ENST00000490471 CSB-PGBD3P0DP91 1061 aa16■□□□□ 0.15
CDCP1-203ENST00000490471 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
CDCP1-203ENST00000490471 PUS7Q96PZ0 661 aaKnown RBP16■□□□□ 0.15
CDCP1-203ENST00000490471 CAMTA1Q9Y6Y1 1673 aa15.99■□□□□ 0.15
CDCP1-203ENST00000490471 TRIM37O94972 964 aa15.99■□□□□ 0.15
CDCP1-203ENST00000490471 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
CDCP1-203ENST00000490471 DISP2A7MBM2 1401 aa15.98■□□□□ 0.15
CDCP1-203ENST00000490471 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
CDCP1-203ENST00000490471 DDB1Q16531 1140 aa15.97■□□□□ 0.15
CDCP1-203ENST00000490471 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
CDCP1-203ENST00000490471 LMO7Q8WWI1 1683 aa15.96■□□□□ 0.15
CDCP1-203ENST00000490471 SLIT3O75094 1523 aa15.96■□□□□ 0.15
CDCP1-203ENST00000490471 WDR17Q8IZU2 1322 aa15.95■□□□□ 0.14
CDCP1-203ENST00000490471 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
CDCP1-203ENST00000490471 AKAP12Q02952 1782 aa15.95■□□□□ 0.14
CDCP1-203ENST00000490471 SOX12O15370 315 aa15.94■□□□□ 0.14
CDCP1-203ENST00000490471 NINLQ9Y2I6 1382 aa15.94■□□□□ 0.14
CDCP1-203ENST00000490471 CPSF1Q10570 1443 aaKnown RBP15.94■□□□□ 0.14
CDCP1-203ENST00000490471 EXOC5O00471 708 aa15.93■□□□□ 0.14
CDCP1-203ENST00000490471 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
CDCP1-203ENST00000490471 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
CDCP1-203ENST00000490471 CARD10Q9BWT7 1032 aa15.93■□□□□ 0.14
CDCP1-203ENST00000490471 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
CDCP1-203ENST00000490471 OVOS2A0A0J9YW53 1432 aa15.93■□□□□ 0.14
CDCP1-203ENST00000490471 OVOS2Q6IE36 1432 aa15.93■□□□□ 0.14
CDCP1-203ENST00000490471 CCDC7Q96M83 1385 aa15.92■□□□□ 0.14
CDCP1-203ENST00000490471 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
CDCP1-203ENST00000490471 CDCA8Q53HL2 280 aa15.92■□□□□ 0.14
CDCP1-203ENST00000490471 CAMKK2Q96RR4 588 aa15.92■□□□□ 0.14
CDCP1-203ENST00000490471 PARP4Q9UKK3 1724 aaKnown RBP15.91■□□□□ 0.14
CDCP1-203ENST00000490471 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
CDCP1-203ENST00000490471 PIK3C2AO00443 1686 aa15.91■□□□□ 0.14
CDCP1-203ENST00000490471 USP31Q70CQ4 1352 aa15.9■□□□□ 0.14
CDCP1-203ENST00000490471 ABCC6O95255 1503 aa15.9■□□□□ 0.14
CDCP1-203ENST00000490471 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
CDCP1-203ENST00000490471 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
CDCP1-203ENST00000490471 TNS1Q9HBL0 1735 aaKnown RBP15.88■□□□□ 0.13
CDCP1-203ENST00000490471 PLSCR1O15162 318 aa15.88■□□□□ 0.13
CDCP1-203ENST00000490471 TMF1P82094 1093 aa15.88■□□□□ 0.13
CDCP1-203ENST00000490471 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
CDCP1-203ENST00000490471 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
CDCP1-203ENST00000490471 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
CDCP1-203ENST00000490471 AXIN2Q9Y2T1 843 aa15.88■□□□□ 0.13
CDCP1-203ENST00000490471 MON2Q7Z3U7 1717 aa15.88■□□□□ 0.13
CDCP1-203ENST00000490471 LRP5O75197 1615 aa15.87■□□□□ 0.13
CDCP1-203ENST00000490471 COG3Q96JB2 828 aa15.87■□□□□ 0.13
CDCP1-203ENST00000490471 NLRP2Q9NX02 1062 aa15.86■□□□□ 0.13
CDCP1-203ENST00000490471 COL18A1P39060 1754 aa15.85■□□□□ 0.13
CDCP1-203ENST00000490471 ST20-MTHFSA0A0A6YYL1 179 aa15.85■□□□□ 0.13
CDCP1-203ENST00000490471 ABCB7O75027 752 aa15.85■□□□□ 0.13
CDCP1-203ENST00000490471 NME9Q86XW9 330 aa15.85■□□□□ 0.13
CDCP1-203ENST00000490471 IL2RBP14784 551 aa15.83■□□□□ 0.12
CDCP1-203ENST00000490471 PPP1R1BQ9UD71 204 aaPredicted RBP15.83■□□□□ 0.12
CDCP1-203ENST00000490471 BCL9O00512 1426 aa15.83■□□□□ 0.12
CDCP1-203ENST00000490471 SPON1Q9HCB6 807 aa15.82■□□□□ 0.12
CDCP1-203ENST00000490471 A0A1W2PP64 1363 aa15.81■□□□□ 0.12
CDCP1-203ENST00000490471 NFAT5O94916 1531 aa15.81■□□□□ 0.12
CDCP1-203ENST00000490471 ERBB3P21860 1342 aa15.81■□□□□ 0.12
CDCP1-203ENST00000490471 HMGB2P26583 209 aaKnown RBP15.81■□□□□ 0.12
CDCP1-203ENST00000490471 AMPHP49418 695 aa15.81■□□□□ 0.12
CDCP1-203ENST00000490471 ANKRD24Q8TF21 1146 aa15.81■□□□□ 0.12
CDCP1-203ENST00000490471 RGPD5Q99666 1765 aa15.81■□□□□ 0.12
CDCP1-203ENST00000490471 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
CDCP1-203ENST00000490471 USP54Q70EL1 1684 aa15.8■□□□□ 0.12
CDCP1-203ENST00000490471 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
CDCP1-203ENST00000490471 MARCH10Q8NA82 808 aaPredicted RBP15.8■□□□□ 0.12
CDCP1-203ENST00000490471 IP6K1Q92551 441 aa15.8■□□□□ 0.12
CDCP1-203ENST00000490471 WNK3Q9BYP7 1800 aa15.79■□□□□ 0.12
CDCP1-203ENST00000490471 RGPD3A6NKT7 1758 aaPredicted RBP15.79■□□□□ 0.12
CDCP1-203ENST00000490471 RGPD4Q7Z3J3 1758 aa15.79■□□□□ 0.12
CDCP1-203ENST00000490471 RREB1Q92766 1687 aa15.79■□□□□ 0.12
CDCP1-203ENST00000490471 ANKRD36BQ8N2N9 1353 aa15.78■□□□□ 0.12
CDCP1-203ENST00000490471 TESK2Q96S53 571 aa15.78■□□□□ 0.12
CDCP1-203ENST00000490471 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
CDCP1-203ENST00000490471 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
CDCP1-203ENST00000490471 LTN1O94822 1766 aa15.77■□□□□ 0.12
CDCP1-203ENST00000490471 KCNQ2O43526 872 aa15.77■□□□□ 0.12
CDCP1-203ENST00000490471 SBF2Q86WG5 1849 aa15.77■□□□□ 0.11
CDCP1-203ENST00000490471 TNS2Q63HR2 1409 aa15.77■□□□□ 0.11
CDCP1-203ENST00000490471 USP47Q96K76 1375 aa15.76■□□□□ 0.11
CDCP1-203ENST00000490471 EP400Q96L91 3159 aa15.76■□□□□ 0.11
CDCP1-203ENST00000490471 PEAK1Q9H792 1746 aa15.76■□□□□ 0.11
CDCP1-203ENST00000490471 SMG6Q86US8 1419 aaKnown RBP15.76■□□□□ 0.11
CDCP1-203ENST00000490471 NUP188Q5SRE5 1749 aa15.75■□□□□ 0.11
CDCP1-203ENST00000490471 LTV1Q96GA3 475 aaPredicted RBP15.75■□□□□ 0.11
CDCP1-203ENST00000490471 FAM208AQ9UK61 1670 aaKnown RBP15.75■□□□□ 0.11
CDCP1-203ENST00000490471 TXNRD1Q16881 649 aa15.74■□□□□ 0.11
CDCP1-203ENST00000490471 PCGF6Q9BYE7 350 aa15.73■□□□□ 0.11
CDCP1-203ENST00000490471 RTL1A6NKG5 1358 aa15.73■□□□□ 0.11
CDCP1-203ENST00000490471 CGNL1Q0VF96 1302 aa15.72■□□□□ 0.11
CDCP1-203ENST00000490471 HOXC9P31274 260 aa15.72■□□□□ 0.11
CDCP1-203ENST00000490471 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
CDCP1-203ENST00000490471 RAPGEF4Q8WZA2 1011 aa15.71■□□□□ 0.11
CDCP1-203ENST00000490471 ACSBG1Q96GR2 724 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms