RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 ST20-MTHFSA0A0A6YYL1 179 aa16.69■□□□□ 0.26
SEMA6C-208ENST00000489944 TMC1Q8TDI8 760 aa16.69■□□□□ 0.26
SEMA6C-208ENST00000489944 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-208ENST00000489944 NFAT5O94916 1531 aa16.69■□□□□ 0.26
SEMA6C-208ENST00000489944 TMF1P82094 1093 aa16.68■□□□□ 0.26
SEMA6C-208ENST00000489944 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
SEMA6C-208ENST00000489944 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
SEMA6C-208ENST00000489944 CARD10Q9BWT7 1032 aa16.67■□□□□ 0.26
SEMA6C-208ENST00000489944 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
SEMA6C-208ENST00000489944 BCL9O00512 1426 aa16.67■□□□□ 0.26
SEMA6C-208ENST00000489944 DEFB132Q7Z7B7 95 aa16.66■□□□□ 0.26
SEMA6C-208ENST00000489944 SLC12A5Q9H2X9 1139 aa16.66■□□□□ 0.26
SEMA6C-208ENST00000489944 A0A1W2PP64 1363 aa16.65■□□□□ 0.26
SEMA6C-208ENST00000489944 ANKRD36BQ8N2N9 1353 aa16.64■□□□□ 0.26
SEMA6C-208ENST00000489944 USP47Q96K76 1375 aa16.64■□□□□ 0.26
SEMA6C-208ENST00000489944 OVOS2A0A0G2JMS6 1433 aa16.64■□□□□ 0.25
SEMA6C-208ENST00000489944 OVOS2A0A0J9YW53 1432 aa16.64■□□□□ 0.25
SEMA6C-208ENST00000489944 OVOS2Q6IE36 1432 aa16.64■□□□□ 0.25
SEMA6C-208ENST00000489944 DDB1Q16531 1140 aa16.64■□□□□ 0.25
SEMA6C-208ENST00000489944 TNS1Q9HBL0 1735 aaKnown RBP16.63■□□□□ 0.25
SEMA6C-208ENST00000489944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
SEMA6C-208ENST00000489944 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
SEMA6C-208ENST00000489944 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
SEMA6C-208ENST00000489944 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
SEMA6C-208ENST00000489944 NME9Q86XW9 330 aa16.61■□□□□ 0.25
SEMA6C-208ENST00000489944 TRIM37O94972 964 aa16.6■□□□□ 0.25
SEMA6C-208ENST00000489944 COG3Q96JB2 828 aa16.6■□□□□ 0.25
SEMA6C-208ENST00000489944 CAMKK2Q96RR4 588 aa16.6■□□□□ 0.25
SEMA6C-208ENST00000489944 ERBB3P21860 1342 aa16.6■□□□□ 0.25
SEMA6C-208ENST00000489944 WNK3Q9BYP7 1800 aa16.59■□□□□ 0.25
SEMA6C-208ENST00000489944 APBA3O96018 575 aa16.59■□□□□ 0.25
SEMA6C-208ENST00000489944 EN1Q05925 392 aaPredicted RBP16.59■□□□□ 0.25
SEMA6C-208ENST00000489944 FAM182BQ5T319 152 aa16.59■□□□□ 0.25
SEMA6C-208ENST00000489944 EXOC5O00471 708 aa16.58■□□□□ 0.24
SEMA6C-208ENST00000489944 PLSCR1O15162 318 aa16.58■□□□□ 0.24
SEMA6C-208ENST00000489944 LRRC37A3O60309 1634 aa16.58■□□□□ 0.24
SEMA6C-208ENST00000489944 RGPD3A6NKT7 1758 aaPredicted RBP16.58■□□□□ 0.24
SEMA6C-208ENST00000489944 RGPD4Q7Z3J3 1758 aa16.58■□□□□ 0.24
SEMA6C-208ENST00000489944 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
SEMA6C-208ENST00000489944 IP6K1Q92551 441 aa16.57■□□□□ 0.24
SEMA6C-208ENST00000489944 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 LRP5O75197 1615 aa16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 KIF24Q5T7B8 1368 aa16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 SOX12O15370 315 aa16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 LTN1O94822 1766 aa16.56■□□□□ 0.24
SEMA6C-208ENST00000489944 TNS2Q63HR2 1409 aa16.55■□□□□ 0.24
SEMA6C-208ENST00000489944 RGPD5Q99666 1765 aa16.55■□□□□ 0.24
SEMA6C-208ENST00000489944 EZH2Q15910 746 aaKnown RBP16.54■□□□□ 0.24
SEMA6C-208ENST00000489944 ANKRD24Q8TF21 1146 aa16.54■□□□□ 0.24
SEMA6C-208ENST00000489944 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
SEMA6C-208ENST00000489944 SRCAPQ6ZRS2 3230 aa16.54■□□□□ 0.24
SEMA6C-208ENST00000489944 RREB1Q92766 1687 aa16.53■□□□□ 0.24
SEMA6C-208ENST00000489944 IL2RBP14784 551 aa16.53■□□□□ 0.24
SEMA6C-208ENST00000489944 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
SEMA6C-208ENST00000489944 FYB1O15117 783 aa16.51■□□□□ 0.23
SEMA6C-208ENST00000489944 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
SEMA6C-208ENST00000489944 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
SEMA6C-208ENST00000489944 CGNL1Q0VF96 1302 aa16.49■□□□□ 0.23
SEMA6C-208ENST00000489944 MAP3K19Q56UN5 1328 aa16.49■□□□□ 0.23
SEMA6C-208ENST00000489944 AMPHP49418 695 aa16.49■□□□□ 0.23
SEMA6C-208ENST00000489944 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
SEMA6C-208ENST00000489944 HOXC9P31274 260 aa16.48■□□□□ 0.23
SEMA6C-208ENST00000489944 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
SEMA6C-208ENST00000489944 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
SEMA6C-208ENST00000489944 R3HDM1Q15032 1099 aaKnown RBP16.47■□□□□ 0.23
SEMA6C-208ENST00000489944 NUP188Q5SRE5 1749 aa16.47■□□□□ 0.23
SEMA6C-208ENST00000489944 HMGB2P26583 209 aaKnown RBP16.46■□□□□ 0.23
SEMA6C-208ENST00000489944 PSDA5PKW4 1024 aaPredicted RBP16.45■□□□□ 0.22
SEMA6C-208ENST00000489944 INSRP06213 1382 aa16.45■□□□□ 0.22
SEMA6C-208ENST00000489944 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
SEMA6C-208ENST00000489944 FLT4P35916 1363 aa16.44■□□□□ 0.22
SEMA6C-208ENST00000489944 MYOM1P52179 1685 aa16.43■□□□□ 0.22
SEMA6C-208ENST00000489944 NHSQ6T4R5 1651 aa16.43■□□□□ 0.22
SEMA6C-208ENST00000489944 GGNBP2Q9H3C7 697 aa16.43■□□□□ 0.22
SEMA6C-208ENST00000489944 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
SEMA6C-208ENST00000489944 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
SEMA6C-208ENST00000489944 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
SEMA6C-208ENST00000489944 NSD2O96028 1365 aa16.39■□□□□ 0.21
SEMA6C-208ENST00000489944 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
SEMA6C-208ENST00000489944 ZCRB1Q8TBF4 217 aaKnown RBP16.39■□□□□ 0.21
SEMA6C-208ENST00000489944 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
SEMA6C-208ENST00000489944 SPON1Q9HCB6 807 aa16.39■□□□□ 0.21
SEMA6C-208ENST00000489944 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
SEMA6C-208ENST00000489944 LTV1Q96GA3 475 aaPredicted RBP16.38■□□□□ 0.21
SEMA6C-208ENST00000489944 SLC27A3Q5K4L6 730 aa16.37■□□□□ 0.21
SEMA6C-208ENST00000489944 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
SEMA6C-208ENST00000489944 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
SEMA6C-208ENST00000489944 KCNQ2O43526 872 aa16.36■□□□□ 0.21
SEMA6C-208ENST00000489944 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
SEMA6C-208ENST00000489944 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
SEMA6C-208ENST00000489944 PROM2Q8N271 834 aa16.36■□□□□ 0.21
SEMA6C-208ENST00000489944 ANKRD26Q9UPS8 1709 aa16.36■□□□□ 0.21
SEMA6C-208ENST00000489944 NBPF6Q5VWK0 638 aa16.35■□□□□ 0.21
SEMA6C-208ENST00000489944 NBPF4Q96M43 638 aa16.35■□□□□ 0.21
SEMA6C-208ENST00000489944 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
SEMA6C-208ENST00000489944 SLC15A2Q16348 729 aa16.34■□□□□ 0.21
SEMA6C-208ENST00000489944 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms