RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 BCL9O00512 1426 aa21.98■■□□□ 1.11
SDHAF3-204ENST00000489852 AATKQ6ZMQ8 1374 aa21.98■■□□□ 1.11
SDHAF3-204ENST00000489852 POLD1P28340 1107 aa21.96■■□□□ 1.11
SDHAF3-204ENST00000489852 NLGN2Q8NFZ4 835 aa21.96■■□□□ 1.11
SDHAF3-204ENST00000489852 YBX3P16989 372 aaKnown RBP eCLIP21.95■■□□□ 1.1
SDHAF3-204ENST00000489852 AKAP12Q02952 1782 aa21.93■■□□□ 1.1
SDHAF3-204ENST00000489852 ABTB2Q8N961 1025 aa21.93■■□□□ 1.1
SDHAF3-204ENST00000489852 ZNF526Q8TF50 670 aaPredicted RBP21.93■■□□□ 1.1
SDHAF3-204ENST00000489852 TOM1L2Q6ZVM7 507 aa21.92■■□□□ 1.1
SDHAF3-204ENST00000489852 TRAK1Q9UPV9 953 aa21.92■■□□□ 1.1
SDHAF3-204ENST00000489852 SLC16A10Q8TF71 515 aa21.91■■□□□ 1.1
SDHAF3-204ENST00000489852 ITSN1Q15811 1721 aa21.91■■□□□ 1.1
SDHAF3-204ENST00000489852 GCP02774 474 aa21.9■■□□□ 1.1
SDHAF3-204ENST00000489852 APLP1P51693 650 aa21.9■■□□□ 1.1
SDHAF3-204ENST00000489852 COL13A1Q5TAT6 717 aaPredicted RBP21.9■■□□□ 1.1
SDHAF3-204ENST00000489852 NUDT16Q96DE0 195 aaKnown RBP21.9■■□□□ 1.1
SDHAF3-204ENST00000489852 TOPAZ1Q8N9V7 1692 aa21.89■■□□□ 1.1
SDHAF3-204ENST00000489852 USP19O94966 1318 aa21.89■■□□□ 1.1
SDHAF3-204ENST00000489852 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.09
SDHAF3-204ENST00000489852 ZNF827Q17R98 1081 aa21.89■■□□□ 1.09
SDHAF3-204ENST00000489852 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
SDHAF3-204ENST00000489852 PAPPAQ13219 1627 aa21.88■■□□□ 1.09
SDHAF3-204ENST00000489852 PRELPP51888 382 aa21.87■■□□□ 1.09
SDHAF3-204ENST00000489852 DNAJC5GQ8N7S2 189 aa21.87■■□□□ 1.09
SDHAF3-204ENST00000489852 NLRP13Q86W25 1043 aa21.86■■□□□ 1.09
SDHAF3-204ENST00000489852 ACEP12821 1306 aa21.85■■□□□ 1.09
SDHAF3-204ENST00000489852 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
SDHAF3-204ENST00000489852 POLR3AO14802 1390 aaPredicted RBP21.84■■□□□ 1.09
SDHAF3-204ENST00000489852 ADCY9O60503 1353 aa21.84■■□□□ 1.09
SDHAF3-204ENST00000489852 EXOC5O00471 708 aa21.83■■□□□ 1.09
SDHAF3-204ENST00000489852 TNS4Q8IZW8 715 aa21.83■■□□□ 1.09
SDHAF3-204ENST00000489852 COL24A1Q17RW2 1714 aa21.83■■□□□ 1.08
SDHAF3-204ENST00000489852 ADGRB1O14514 1584 aa21.81■■□□□ 1.08
SDHAF3-204ENST00000489852 KIF3CO14782 793 aa21.8■■□□□ 1.08
SDHAF3-204ENST00000489852 ACSBG1Q96GR2 724 aa21.8■■□□□ 1.08
SDHAF3-204ENST00000489852 WDR17Q8IZU2 1322 aa21.8■■□□□ 1.08
SDHAF3-204ENST00000489852 NHSQ6T4R5 1651 aa21.79■■□□□ 1.08
SDHAF3-204ENST00000489852 AKT1S1Q96B36 256 aa21.79■■□□□ 1.08
SDHAF3-204ENST00000489852 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
SDHAF3-204ENST00000489852 PNPLA7Q6ZV29 1317 aa21.78■■□□□ 1.08
SDHAF3-204ENST00000489852 SLC34A2O95436 690 aa21.77■■□□□ 1.08
SDHAF3-204ENST00000489852 QSER1Q2KHR3 1735 aa21.77■■□□□ 1.08
SDHAF3-204ENST00000489852 BRD4O60885 1362 aaPredicted RBP21.76■■□□□ 1.07
SDHAF3-204ENST00000489852 CCDC61Q9Y6R9 512 aa21.76■■□□□ 1.07
SDHAF3-204ENST00000489852 PLEKHG3A1L390 1219 aa21.75■■□□□ 1.07
SDHAF3-204ENST00000489852 CDK19Q9BWU1 502 aa21.75■■□□□ 1.07
SDHAF3-204ENST00000489852 CARD10Q9BWT7 1032 aa21.74■■□□□ 1.07
SDHAF3-204ENST00000489852 TFCP2L1Q9NZI6 479 aa21.74■■□□□ 1.07
SDHAF3-204ENST00000489852 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
SDHAF3-204ENST00000489852 USP6P35125 1406 aa21.73■■□□□ 1.07
SDHAF3-204ENST00000489852 BTAF1O14981 1849 aa21.72■■□□□ 1.07
SDHAF3-204ENST00000489852 CSB-PGBD3P0DP91 1061 aa21.72■■□□□ 1.07
SDHAF3-204ENST00000489852 COL18A1P39060 1754 aa21.71■■□□□ 1.07
SDHAF3-204ENST00000489852 TNS2Q63HR2 1409 aa21.71■■□□□ 1.07
SDHAF3-204ENST00000489852 SLC27A3Q5K4L6 730 aa21.7■■□□□ 1.06
SDHAF3-204ENST00000489852 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
SDHAF3-204ENST00000489852 MPHOSPH9Q99550 1183 aa21.7■■□□□ 1.06
SDHAF3-204ENST00000489852 TOMM70O94826 608 aa21.69■■□□□ 1.06
SDHAF3-204ENST00000489852 NLRP6P59044 892 aa21.69■■□□□ 1.06
SDHAF3-204ENST00000489852 JMYQ8N9B5 988 aa21.68■■□□□ 1.06
SDHAF3-204ENST00000489852 KLRG1Q96E93 195 aa21.68■■□□□ 1.06
SDHAF3-204ENST00000489852 ARHGEF28Q8N1W1 1705 aaKnown RBP21.68■■□□□ 1.06
SDHAF3-204ENST00000489852 TUBGCP6Q96RT7 1819 aa21.66■■□□□ 1.06
SDHAF3-204ENST00000489852 SLIT3O75094 1523 aa21.66■■□□□ 1.06
SDHAF3-204ENST00000489852 CD2APQ9Y5K6 639 aa21.66■■□□□ 1.06
SDHAF3-204ENST00000489852 CCDC7Q96M83 1385 aa21.65■■□□□ 1.06
SDHAF3-204ENST00000489852 MSH5O43196 834 aa21.65■■□□□ 1.06
SDHAF3-204ENST00000489852 WDR90Q96KV7 1748 aa21.65■■□□□ 1.06
SDHAF3-204ENST00000489852 KAT6BQ8WYB5 2073 aa21.65■■□□□ 1.06
SDHAF3-204ENST00000489852 ABCC6O95255 1503 aa21.63■■□□□ 1.05
SDHAF3-204ENST00000489852 RGPD5Q99666 1765 aa21.63■■□□□ 1.05
SDHAF3-204ENST00000489852 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
SDHAF3-204ENST00000489852 PPIP5K1Q6PFW1 1433 aa21.63■■□□□ 1.05
SDHAF3-204ENST00000489852 KCNQ4P56696 695 aa21.62■■□□□ 1.05
SDHAF3-204ENST00000489852 TRPM1Q7Z4N2 1603 aa21.62■■□□□ 1.05
SDHAF3-204ENST00000489852 HTRA3P83110 453 aa21.61■■□□□ 1.05
SDHAF3-204ENST00000489852 MSL1Q68DK7 614 aa21.61■■□□□ 1.05
SDHAF3-204ENST00000489852 ARHGEF25Q86VW2 580 aa21.61■■□□□ 1.05
SDHAF3-204ENST00000489852 WWC3Q9ULE0 1092 aa21.6■■□□□ 1.05
SDHAF3-204ENST00000489852 PCNTO95613 3336 aa21.59■■□□□ 1.05
SDHAF3-204ENST00000489852 COL23A1Q86Y22 540 aaPredicted RBP21.58■■□□□ 1.05
SDHAF3-204ENST00000489852 KDM2AQ9Y2K7 1162 aa21.58■■□□□ 1.05
SDHAF3-204ENST00000489852 SOX12O15370 315 aa21.55■■□□□ 1.04
SDHAF3-204ENST00000489852 IGSF1Q8N6C5 1336 aa21.55■■□□□ 1.04
SDHAF3-204ENST00000489852 IL2RBP14784 551 aa21.54■■□□□ 1.04
SDHAF3-204ENST00000489852 SRPK2P78362 688 aaKnown RBP21.54■■□□□ 1.04
SDHAF3-204ENST00000489852 KCNH5Q8NCM2 988 aa21.54■■□□□ 1.04
SDHAF3-204ENST00000489852 PCDH10Q9P2E7 1040 aa21.54■■□□□ 1.04
SDHAF3-204ENST00000489852 RBM46Q8TBY0 533 aaKnown RBP21.53■■□□□ 1.04
SDHAF3-204ENST00000489852 NMRK2Q9NPI5 230 aa21.52■■□□□ 1.04
SDHAF3-204ENST00000489852 PIK3C2AO00443 1686 aa21.51■■□□□ 1.03
SDHAF3-204ENST00000489852 DCAF11Q8TEB1 546 aa21.51■■□□□ 1.03
SDHAF3-204ENST00000489852 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
SDHAF3-204ENST00000489852 C16orf71Q8IYS4 520 aaPredicted RBP21.49■■□□□ 1.03
SDHAF3-204ENST00000489852 SYTL4Q96C24 671 aaPredicted RBP21.49■■□□□ 1.03
SDHAF3-204ENST00000489852 CCNL1Q9UK58 526 aaPredicted RBP21.49■■□□□ 1.03
SDHAF3-204ENST00000489852 CABP2Q9NPB3 220 aa21.48■■□□□ 1.03
SDHAF3-204ENST00000489852 CABP1Q9NZU7 370 aa21.48■■□□□ 1.03
SDHAF3-204ENST00000489852 FSTL1Q12841 308 aa21.47■■□□□ 1.03
SDHAF3-204ENST00000489852 LY75O60449 1722 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms