RNA–Protein interactions for RNA: ENST00000489585.5

LYST-211, Transcript of lysosomal trafficking regulator, humanhuman

TSL 1 (best)

Gene LYST, Length 7,069 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-211ENST00000489585 ITSN2Q9NZM3 1697 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 CAMSAP2Q08AD1 1489 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 TNNT1P13805 278 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 LMOD3Q0VAK6 560 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 SWAP70Q9UH65 585 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 PIP4K2AP48426 406 aaPredicted RBP5.16□□□□□ -1.58
LYST-211ENST00000489585 TTLL5Q6EMB2 1281 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 CCDC73Q6ZRK6 1079 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 BICD2Q8TD16 824 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 UBXN6Q9BZV1 441 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 RBM28Q9NW13 759 aaKnown RBP5.16□□□□□ -1.58
LYST-211ENST00000489585 PZPP20742 1482 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 TXLNAP40222 546 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 MAP2K1Q02750 393 aaPredicted RBP5.16□□□□□ -1.58
LYST-211ENST00000489585 SMC1AQ14683 1233 aaKnown RBP5.16□□□□□ -1.58
LYST-211ENST00000489585 LRRCC1Q9C099 1032 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 SCAF11Q99590 1463 aaKnown RBP5.16□□□□□ -1.58
LYST-211ENST00000489585 KTN1Q86UP2 1357 aaKnown RBP5.16□□□□□ -1.58
LYST-211ENST00000489585 RBM25P49756 843 aaKnown RBP5.16□□□□□ -1.58
LYST-211ENST00000489585 C20orf194Q5TEA3 1177 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 ANKRD30BQ9BXX2 1392 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 PDILTQ8N807 584 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 PANK3Q9H999 370 aa5.16□□□□□ -1.58
LYST-211ENST00000489585 GRIN2BQ13224 1484 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 KIF3CO14782 793 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 FBLN2P98095 1184 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 FGD6Q6ZV73 1430 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 RALGAPBQ86X10 1494 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 ERICH4A6NGS2 130 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 DYNC1I1O14576 645 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 HOMEZQ8IX15 550 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 IQSEC2Q5JU85 1478 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 GTF2A1P52655 376 aaPredicted RBP5.15□□□□□ -1.58
LYST-211ENST00000489585 CCDC43Q96MW1 224 aaKnown RBP5.15□□□□□ -1.58
LYST-211ENST00000489585 GBP3Q9H0R5 595 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 CFAP45Q9UL16 551 aa5.15□□□□□ -1.58
LYST-211ENST00000489585 BICRAQ9NZM4 1560 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 EPS15P42566 896 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 C6orf163Q5TEZ5 329 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 CCDC181Q5TID7 509 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 MCTP1Q6DN14 999 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 RTF1Q92541 710 aaKnown RBP5.15□□□□□ -1.59
LYST-211ENST00000489585 CHMP5Q9NZZ3 219 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 IRF6O14896 467 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 TSPY4P0CV99 314 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 TSPY10P0CW01 314 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 PLEKHD1A6NEE1 506 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 VGLL3A8MV65 326 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 C11orf91Q3C1V1 193 aa5.15□□□□□ -1.59
LYST-211ENST00000489585 LUC7LQ9NQ29 371 aaKnown RBP5.15□□□□□ -1.59
LYST-211ENST00000489585 CYP2E1P05181 493 aaPredicted RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 GIGYF2Q6Y7W6 1299 aaKnown RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 TDO2P48775 406 aa5.14□□□□□ -1.59
LYST-211ENST00000489585 CCDC102AQ96A19 550 aa5.14□□□□□ -1.59
LYST-211ENST00000489585 NAP1L3Q99457 506 aaPredicted RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 CPSF2Q9P2I0 782 aaKnown RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 DZIP1Q86YF9 867 aaKnown RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 ZWINTO95229 277 aa5.14□□□□□ -1.59
LYST-211ENST00000489585 GRPEL1Q9HAV7 217 aa5.14□□□□□ -1.59
LYST-211ENST00000489585 CTDP1Q9Y5B0 961 aaPredicted RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 NOL3O60936 208 aaKnown RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 HSPA5P11021 654 aaKnown RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 SYCP1Q15431 976 aa5.14□□□□□ -1.59
LYST-211ENST00000489585 DNAJC2Q99543 621 aaKnown RBP5.14□□□□□ -1.59
LYST-211ENST00000489585 IBSPP21815 317 aaPredicted RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 FILIP1LQ4L180 1135 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 SOGA3Q5TF21 947 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 DDX46Q7L014 1031 aaKnown RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 TCHPQ9BT92 498 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 CFAP74Q9C0B2 1584 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 NASPP49321 788 aaPredicted RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 NUCB2P80303 420 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 EGFL6Q8IUX8 553 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 P3H3Q8IVL6 736 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 SENP3-EIF4A1A0A087X0R7 540 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 TMCO3Q6UWJ1 677 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 CCDC97Q96F63 343 aaPredicted RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 SPTLC3Q9NUV7 552 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 DNMT1P26358 1616 aaKnown RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 FGD5Q6ZNL6 1462 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 SETD1AO15047 1707 aaKnown RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 MCM4P33991 863 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 CCDC6Q16204 474 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 NBPF8Q3BBV2 869 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 AMOTL1Q8IY63 956 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 SLX1AQ9BQ83 275 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 HIRIP3Q9BW71 556 aaPredicted RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 CARD11Q9BXL7 1154 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 ZNF446Q9NWS9 450 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 SARNPP82979 210 aaKnown RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 RNF168Q8IYW5 571 aaPredicted RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 ZNHIT6Q9NWK9 470 aaKnown RBP5.13□□□□□ -1.59
LYST-211ENST00000489585 RCAN3Q9UKA8 241 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 CHIC2Q9UKJ5 165 aa5.13□□□□□ -1.59
LYST-211ENST00000489585 IQGAP1P46940 1657 aa5.12□□□□□ -1.59
LYST-211ENST00000489585 BRD4O60885 1362 aaPredicted RBP5.12□□□□□ -1.59
LYST-211ENST00000489585 GSCP56915 257 aaPredicted RBP5.12□□□□□ -1.59
LYST-211ENST00000489585 FAM193AP78312 1265 aa5.12□□□□□ -1.59
LYST-211ENST00000489585 FAM161AQ3B820 660 aa5.12□□□□□ -1.59
LYST-211ENST00000489585 SEPT14Q6ZU15 432 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms