RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PRR36Q9H6K5 1346 aa13.86□□□□□ -0.19
SSBP1-212ENST00000489378 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-212ENST00000489378 ZBTB7AO95365 584 aa13.86□□□□□ -0.19
SSBP1-212ENST00000489378 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
SSBP1-212ENST00000489378 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
SSBP1-212ENST00000489378 GALR2O43603 387 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-212ENST00000489378 ZC3H6P61129 1189 aaKnown RBP13.84□□□□□ -0.19
SSBP1-212ENST00000489378 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-212ENST00000489378 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
SSBP1-212ENST00000489378 PHRF1Q9P1Y6 1649 aaKnown RBP13.84□□□□□ -0.19
SSBP1-212ENST00000489378 EVA1CP58658 441 aa13.83□□□□□ -0.2
SSBP1-212ENST00000489378 CFAP70Q5T0N1 1121 aa13.83□□□□□ -0.2
SSBP1-212ENST00000489378 LARP1Q6PKG0 1096 aaKnown RBP13.83□□□□□ -0.2
SSBP1-212ENST00000489378 SYT17Q9BSW7 474 aa13.83□□□□□ -0.2
SSBP1-212ENST00000489378 HIRIP3Q9BW71 556 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-212ENST00000489378 RGPD3A6NKT7 1758 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-212ENST00000489378 RGPD4Q7Z3J3 1758 aa13.82□□□□□ -0.2
SSBP1-212ENST00000489378 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
SSBP1-212ENST00000489378 POGKQ9P215 609 aa13.82□□□□□ -0.2
SSBP1-212ENST00000489378 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
SSBP1-212ENST00000489378 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
SSBP1-212ENST00000489378 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
SSBP1-212ENST00000489378 PHF12Q96QT6 1004 aa13.81□□□□□ -0.2
SSBP1-212ENST00000489378 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
SSBP1-212ENST00000489378 PLSCR1O15162 318 aa13.81□□□□□ -0.2
SSBP1-212ENST00000489378 NUTM2GQ5VZR2 741 aa13.81□□□□□ -0.2
SSBP1-212ENST00000489378 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
SSBP1-212ENST00000489378 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
SSBP1-212ENST00000489378 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-212ENST00000489378 PARP4Q9UKK3 1724 aaKnown RBP13.8□□□□□ -0.2
SSBP1-212ENST00000489378 TULP4Q9NRJ4 1543 aa13.79□□□□□ -0.2
SSBP1-212ENST00000489378 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
SSBP1-212ENST00000489378 GIGYF1O75420 1035 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-212ENST00000489378 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
SSBP1-212ENST00000489378 LMO7Q8WWI1 1683 aa13.78□□□□□ -0.2
SSBP1-212ENST00000489378 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
SSBP1-212ENST00000489378 OVOS2A0A0J9YW53 1432 aa13.78□□□□□ -0.2
SSBP1-212ENST00000489378 OVOS2Q6IE36 1432 aa13.78□□□□□ -0.2
SSBP1-212ENST00000489378 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.2
SSBP1-212ENST00000489378 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
SSBP1-212ENST00000489378 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-212ENST00000489378 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
SSBP1-212ENST00000489378 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-212ENST00000489378 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
SSBP1-212ENST00000489378 ATP7BP35670 1465 aa13.74□□□□□ -0.21
SSBP1-212ENST00000489378 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
SSBP1-212ENST00000489378 MTFR1LQ9H019 292 aa13.73□□□□□ -0.21
SSBP1-212ENST00000489378 STK32BQ9NY57 414 aa13.73□□□□□ -0.21
SSBP1-212ENST00000489378 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
SSBP1-212ENST00000489378 CPDO75976 1380 aa13.73□□□□□ -0.21
SSBP1-212ENST00000489378 COL5A2P05997 1499 aaPredicted RBP13.73□□□□□ -0.21
SSBP1-212ENST00000489378 SLC15A2Q16348 729 aa13.73□□□□□ -0.21
SSBP1-212ENST00000489378 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
SSBP1-212ENST00000489378 GPR162Q16538 588 aa13.72□□□□□ -0.21
SSBP1-212ENST00000489378 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
SSBP1-212ENST00000489378 ARXQ96QS3 562 aa13.72□□□□□ -0.21
SSBP1-212ENST00000489378 ITSN1Q15811 1721 aa13.71□□□□□ -0.21
SSBP1-212ENST00000489378 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.21
SSBP1-212ENST00000489378 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.22
SSBP1-212ENST00000489378 MAP3K5Q99683 1374 aa13.71□□□□□ -0.22
SSBP1-212ENST00000489378 CRB1P82279 1406 aa13.71□□□□□ -0.22
SSBP1-212ENST00000489378 DDB1Q16531 1140 aa13.7□□□□□ -0.22
SSBP1-212ENST00000489378 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-212ENST00000489378 MPHOSPH9Q99550 1183 aa13.7□□□□□ -0.22
SSBP1-212ENST00000489378 USP19O94966 1318 aa13.7□□□□□ -0.22
SSBP1-212ENST00000489378 ABTB2Q8N961 1025 aa13.68□□□□□ -0.22
SSBP1-212ENST00000489378 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
SSBP1-212ENST00000489378 ACEP12821 1306 aa13.67□□□□□ -0.22
SSBP1-212ENST00000489378 GCP02774 474 aa13.67□□□□□ -0.22
SSBP1-212ENST00000489378 BCL9O00512 1426 aa13.67□□□□□ -0.22
SSBP1-212ENST00000489378 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
SSBP1-212ENST00000489378 WNK3Q9BYP7 1800 aa13.66□□□□□ -0.22
SSBP1-212ENST00000489378 AKAP12Q02952 1782 aa13.66□□□□□ -0.22
SSBP1-212ENST00000489378 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
SSBP1-212ENST00000489378 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
SSBP1-212ENST00000489378 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
SSBP1-212ENST00000489378 TOM1L2Q6ZVM7 507 aa13.64□□□□□ -0.23
SSBP1-212ENST00000489378 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
SSBP1-212ENST00000489378 MS4A3Q96HJ5 214 aa13.64□□□□□ -0.23
SSBP1-212ENST00000489378 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
SSBP1-212ENST00000489378 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
SSBP1-212ENST00000489378 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
SSBP1-212ENST00000489378 PAPPAQ13219 1627 aa13.63□□□□□ -0.23
SSBP1-212ENST00000489378 PLEKHG3A1L390 1219 aa13.62□□□□□ -0.23
SSBP1-212ENST00000489378 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-212ENST00000489378 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
SSBP1-212ENST00000489378 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
SSBP1-212ENST00000489378 MIER1Q8N108 512 aa13.61□□□□□ -0.23
SSBP1-212ENST00000489378 NLGN2Q8NFZ4 835 aa13.61□□□□□ -0.23
SSBP1-212ENST00000489378 COL18A1P39060 1754 aa13.61□□□□□ -0.23
SSBP1-212ENST00000489378 AXIN2Q9Y2T1 843 aa13.6□□□□□ -0.23
SSBP1-212ENST00000489378 WDR17Q8IZU2 1322 aa13.59□□□□□ -0.23
SSBP1-212ENST00000489378 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
SSBP1-212ENST00000489378 YBX3P16989 372 aaKnown RBP eCLIP13.59□□□□□ -0.23
SSBP1-212ENST00000489378 HSPA6P17066 643 aa13.59□□□□□ -0.23
SSBP1-212ENST00000489378 CDCA7Q9BWT1 371 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-212ENST00000489378 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
SSBP1-212ENST00000489378 NHSQ6T4R5 1651 aa13.58□□□□□ -0.24
SSBP1-212ENST00000489378 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
SSBP1-212ENST00000489378 FKBP8Q14318 412 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms