RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
PHF11-215ENST00000488958 MAFBQ9Y5Q3 323 aaPredicted RBP11.3□□□□□ -0.6
PHF11-215ENST00000488958 WNT7AO00755 349 aa11.29□□□□□ -0.6
PHF11-215ENST00000488958 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
PHF11-215ENST00000488958 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
PHF11-215ENST00000488958 ZNF598Q86UK7 904 aaKnown RBP11.29□□□□□ -0.6
PHF11-215ENST00000488958 RNF20Q5VTR2 975 aa11.28□□□□□ -0.6
PHF11-215ENST00000488958 MRGPRX2Q96LB1 330 aa11.28□□□□□ -0.6
PHF11-215ENST00000488958 KCTD15Q96SI1 283 aaPredicted RBP11.28□□□□□ -0.6
PHF11-215ENST00000488958 SIAH2O43255 324 aa11.27□□□□□ -0.61
PHF11-215ENST00000488958 TSGA10IPQ3SY00 556 aa11.27□□□□□ -0.61
PHF11-215ENST00000488958 PLPP7Q8NBV4 271 aa11.27□□□□□ -0.61
PHF11-215ENST00000488958 MAP4K5Q9Y4K4 846 aa11.27□□□□□ -0.61
PHF11-215ENST00000488958 V9GY48 417 aaPredicted RBP11.27□□□□□ -0.61
PHF11-215ENST00000488958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.26□□□□□ -0.61
PHF11-215ENST00000488958 USP17L5A8MUK1 530 aa11.26□□□□□ -0.61
PHF11-215ENST00000488958 ESPNB1AK53 854 aa11.26□□□□□ -0.61
PHF11-215ENST00000488958 RAB15P59190 212 aa11.26□□□□□ -0.61
PHF11-215ENST00000488958 FOXC1Q12948 553 aa11.26□□□□□ -0.61
PHF11-215ENST00000488958 DEPDC4Q8N2C3 294 aa11.26□□□□□ -0.61
PHF11-215ENST00000488958 CDK15Q96Q40 435 aa11.26□□□□□ -0.61
PHF11-215ENST00000488958 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
PHF11-215ENST00000488958 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
PHF11-215ENST00000488958 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
PHF11-215ENST00000488958 PPP1R15AO75807 674 aaPredicted RBP11.25□□□□□ -0.61
PHF11-215ENST00000488958 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
PHF11-215ENST00000488958 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
PHF11-215ENST00000488958 PBXIP1Q96AQ6 731 aa11.25□□□□□ -0.61
PHF11-215ENST00000488958 CCDC85AQ96PX6 553 aaPredicted RBP11.25□□□□□ -0.61
PHF11-215ENST00000488958 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
PHF11-215ENST00000488958 MAP7D1Q3KQU3 841 aa11.24□□□□□ -0.61
PHF11-215ENST00000488958 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
PHF11-215ENST00000488958 DOLKQ9UPQ8 538 aa11.24□□□□□ -0.61
PHF11-215ENST00000488958 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
PHF11-215ENST00000488958 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
PHF11-215ENST00000488958 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
PHF11-215ENST00000488958 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
PHF11-215ENST00000488958 MPNDQ8N594 471 aa11.23□□□□□ -0.61
PHF11-215ENST00000488958 GRM5P41594 1212 aa11.22□□□□□ -0.61
PHF11-215ENST00000488958 NCOA4Q13772 614 aa11.22□□□□□ -0.61
PHF11-215ENST00000488958 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
PHF11-215ENST00000488958 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
PHF11-215ENST00000488958 VRTNQ9H8Y1 702 aa11.22□□□□□ -0.61
PHF11-215ENST00000488958 PKD2L1Q9P0L9 805 aa11.22□□□□□ -0.61
PHF11-215ENST00000488958 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
PHF11-215ENST00000488958 FSHRP23945 695 aa11.21□□□□□ -0.61
PHF11-215ENST00000488958 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
PHF11-215ENST00000488958 EML3Q32P44 896 aa11.2□□□□□ -0.62
PHF11-215ENST00000488958 OXLD1Q5BKU9 147 aa11.2□□□□□ -0.62
PHF11-215ENST00000488958 KANK4Q5T7N3 995 aaPredicted RBP11.2□□□□□ -0.62
PHF11-215ENST00000488958 CCDC125Q86Z20 511 aa11.2□□□□□ -0.62
PHF11-215ENST00000488958 CDCA7Q9BWT1 371 aaPredicted RBP11.2□□□□□ -0.62
PHF11-215ENST00000488958 ADH1CP00326 375 aa11.19□□□□□ -0.62
PHF11-215ENST00000488958 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
PHF11-215ENST00000488958 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
PHF11-215ENST00000488958 ERVH48-1M5A8F1 160 aa11.18□□□□□ -0.62
PHF11-215ENST00000488958 NR5A1Q13285 461 aa11.17□□□□□ -0.62
PHF11-215ENST00000488958 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
PHF11-215ENST00000488958 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
PHF11-215ENST00000488958 GDF9O60383 454 aa11.16□□□□□ -0.62
PHF11-215ENST00000488958 NOD1Q9Y239 953 aa11.16□□□□□ -0.62
PHF11-215ENST00000488958 TTC24A2A3L6 582 aaPredicted RBP11.15□□□□□ -0.62
PHF11-215ENST00000488958 ATP5J2-PTCD1G3V325 749 aa11.15□□□□□ -0.62
PHF11-215ENST00000488958 DHX9Q08211 1270 aaKnown RBP11.15□□□□□ -0.62
PHF11-215ENST00000488958 USP4Q13107 963 aa11.15□□□□□ -0.62
PHF11-215ENST00000488958 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
PHF11-215ENST00000488958 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
PHF11-215ENST00000488958 CCDC116Q8IYX3 515 aa11.14□□□□□ -0.63
PHF11-215ENST00000488958 TMPRSS4Q9NRS4 437 aa11.14□□□□□ -0.63
PHF11-215ENST00000488958 ATG7O95352 703 aa11.13□□□□□ -0.63
PHF11-215ENST00000488958 NR3C2P08235 984 aa11.13□□□□□ -0.63
PHF11-215ENST00000488958 RASA1P20936 1047 aa11.13□□□□□ -0.63
PHF11-215ENST00000488958 SIRT1Q96EB6 747 aa11.13□□□□□ -0.63
PHF11-215ENST00000488958 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
PHF11-215ENST00000488958 PPP1R26Q5T8A7 1209 aaPredicted RBP11.12□□□□□ -0.63
PHF11-215ENST00000488958 LARP1Q6PKG0 1096 aaKnown RBP11.12□□□□□ -0.63
PHF11-215ENST00000488958 TRIM50Q86XT4 487 aa11.12□□□□□ -0.63
PHF11-215ENST00000488958 RETREG2Q8NC44 543 aa11.12□□□□□ -0.63
PHF11-215ENST00000488958 ESF1Q9H501 851 aaKnown RBP11.12□□□□□ -0.63
PHF11-215ENST00000488958 J3QL48 77 aa11.11□□□□□ -0.63
PHF11-215ENST00000488958 SCTRP47872 440 aa11.11□□□□□ -0.63
PHF11-215ENST00000488958 NNTQ13423 1086 aa11.11□□□□□ -0.63
PHF11-215ENST00000488958 CRTC2Q53ET0 693 aaPredicted RBP11.11□□□□□ -0.63
PHF11-215ENST00000488958 TRIM67Q6ZTA4 783 aa11.11□□□□□ -0.63
PHF11-215ENST00000488958 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
PHF11-215ENST00000488958 CYLDQ9NQC7 956 aa11.11□□□□□ -0.63
PHF11-215ENST00000488958 RGS20O76081 388 aa11.1□□□□□ -0.63
PHF11-215ENST00000488958 CSB-PGBD3P0DP91 1061 aa11.1□□□□□ -0.63
PHF11-215ENST00000488958 GTF2IP78347 998 aa11.1□□□□□ -0.63
PHF11-215ENST00000488958 ZNF784Q8NCA9 323 aaPredicted RBP11.1□□□□□ -0.63
PHF11-215ENST00000488958 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
PHF11-215ENST00000488958 TOR4AQ9NXH8 423 aa11.1□□□□□ -0.63
PHF11-215ENST00000488958 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L10C9JJH3 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L21D6R901 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms