RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
PHF1-210ENST00000488767 SPATA31A1Q5TZJ5 1347 aa17.73■□□□□ 0.43
PHF1-210ENST00000488767 FYB1O15117 783 aa17.73■□□□□ 0.43
PHF1-210ENST00000488767 LARP1Q6PKG0 1096 aaKnown RBP17.73■□□□□ 0.43
PHF1-210ENST00000488767 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
PHF1-210ENST00000488767 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
PHF1-210ENST00000488767 CRB1P82279 1406 aa17.72■□□□□ 0.43
PHF1-210ENST00000488767 ONECUT3O60422 494 aaPredicted RBP17.72■□□□□ 0.43
PHF1-210ENST00000488767 CARD14Q9BXL6 1004 aa17.72■□□□□ 0.43
PHF1-210ENST00000488767 TCP11L2Q8N4U5 519 aa17.71■□□□□ 0.43
PHF1-210ENST00000488767 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.42
PHF1-210ENST00000488767 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
PHF1-210ENST00000488767 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
PHF1-210ENST00000488767 AMPHP49418 695 aa17.7■□□□□ 0.42
PHF1-210ENST00000488767 PANK3Q9H999 370 aa17.7■□□□□ 0.42
PHF1-210ENST00000488767 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
PHF1-210ENST00000488767 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
PHF1-210ENST00000488767 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
PHF1-210ENST00000488767 BARGINQ6ZT62 677 aa17.69■□□□□ 0.42
PHF1-210ENST00000488767 KRT27Q7Z3Y8 459 aa17.69■□□□□ 0.42
PHF1-210ENST00000488767 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
PHF1-210ENST00000488767 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
PHF1-210ENST00000488767 IP6K1Q92551 441 aa17.67■□□□□ 0.42
PHF1-210ENST00000488767 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
PHF1-210ENST00000488767 NSD2O96028 1365 aa17.66■□□□□ 0.42
PHF1-210ENST00000488767 LTN1O94822 1766 aa17.66■□□□□ 0.42
PHF1-210ENST00000488767 COL18A1P39060 1754 aa17.66■□□□□ 0.42
PHF1-210ENST00000488767 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
PHF1-210ENST00000488767 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
PHF1-210ENST00000488767 ERBB3P21860 1342 aa17.66■□□□□ 0.42
PHF1-210ENST00000488767 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
PHF1-210ENST00000488767 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
PHF1-210ENST00000488767 ANKRD24Q8TF21 1146 aa17.65■□□□□ 0.42
PHF1-210ENST00000488767 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
PHF1-210ENST00000488767 NLRP2Q9NX02 1062 aa17.65■□□□□ 0.42
PHF1-210ENST00000488767 CCDC7Q96M83 1385 aa17.65■□□□□ 0.42
PHF1-210ENST00000488767 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
PHF1-210ENST00000488767 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
PHF1-210ENST00000488767 HOXC9P31274 260 aa17.63■□□□□ 0.41
PHF1-210ENST00000488767 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
PHF1-210ENST00000488767 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
PHF1-210ENST00000488767 KIF24Q5T7B8 1368 aa17.63■□□□□ 0.41
PHF1-210ENST00000488767 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
PHF1-210ENST00000488767 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
PHF1-210ENST00000488767 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
PHF1-210ENST00000488767 FLT4P35916 1363 aa17.61■□□□□ 0.41
PHF1-210ENST00000488767 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
PHF1-210ENST00000488767 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
PHF1-210ENST00000488767 RGPD5Q99666 1765 aa17.6■□□□□ 0.41
PHF1-210ENST00000488767 BRWD3Q6RI45 1802 aa17.59■□□□□ 0.41
PHF1-210ENST00000488767 FBLN1P23142 703 aa17.59■□□□□ 0.41
PHF1-210ENST00000488767 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
PHF1-210ENST00000488767 DDB1Q16531 1140 aa17.59■□□□□ 0.41
PHF1-210ENST00000488767 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
PHF1-210ENST00000488767 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.4
PHF1-210ENST00000488767 INSRP06213 1382 aa17.57■□□□□ 0.4
PHF1-210ENST00000488767 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
PHF1-210ENST00000488767 EXOC5O00471 708 aa17.56■□□□□ 0.4
PHF1-210ENST00000488767 IL2RBP14784 551 aa17.56■□□□□ 0.4
PHF1-210ENST00000488767 PARP4Q9UKK3 1724 aaKnown RBP17.55■□□□□ 0.4
PHF1-210ENST00000488767 EMILIN1Q9Y6C2 1016 aa17.55■□□□□ 0.4
PHF1-210ENST00000488767 HSP90AB2PQ58FF8 381 aa17.54■□□□□ 0.4
PHF1-210ENST00000488767 EP400Q96L91 3159 aa17.54■□□□□ 0.4
PHF1-210ENST00000488767 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
PHF1-210ENST00000488767 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
PHF1-210ENST00000488767 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
PHF1-210ENST00000488767 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
PHF1-210ENST00000488767 OVOS2A0A0G2JMS6 1433 aa17.53■□□□□ 0.4
PHF1-210ENST00000488767 DISP2A7MBM2 1401 aa17.52■□□□□ 0.4
PHF1-210ENST00000488767 NPC1L1Q9UHC9 1359 aa17.52■□□□□ 0.39
PHF1-210ENST00000488767 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
PHF1-210ENST00000488767 LRRC37A3O60309 1634 aa17.51■□□□□ 0.39
PHF1-210ENST00000488767 BAG6P46379 1132 aa17.51■□□□□ 0.39
PHF1-210ENST00000488767 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
PHF1-210ENST00000488767 TNS2Q63HR2 1409 aa17.5■□□□□ 0.39
PHF1-210ENST00000488767 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
PHF1-210ENST00000488767 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
PHF1-210ENST00000488767 CNGB1Q14028 1251 aaPredicted RBP17.48■□□□□ 0.39
PHF1-210ENST00000488767 NBPF6Q5VWK0 638 aa17.48■□□□□ 0.39
PHF1-210ENST00000488767 NBPF4Q96M43 638 aa17.48■□□□□ 0.39
PHF1-210ENST00000488767 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
PHF1-210ENST00000488767 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
PHF1-210ENST00000488767 TRIM37O94972 964 aa17.47■□□□□ 0.39
PHF1-210ENST00000488767 TATP17735 454 aaPredicted RBP17.47■□□□□ 0.39
PHF1-210ENST00000488767 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
PHF1-210ENST00000488767 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
PHF1-210ENST00000488767 APBA3O96018 575 aa17.44■□□□□ 0.38
PHF1-210ENST00000488767 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
PHF1-210ENST00000488767 DDX54Q8TDD1 881 aaKnown RBP17.44■□□□□ 0.38
PHF1-210ENST00000488767 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
PHF1-210ENST00000488767 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
PHF1-210ENST00000488767 BCL9O00512 1426 aa17.43■□□□□ 0.38
PHF1-210ENST00000488767 MEGF6O75095 1541 aa17.42■□□□□ 0.38
PHF1-210ENST00000488767 MTHFSP49914 203 aa17.41■□□□□ 0.38
PHF1-210ENST00000488767 EYA1Q99502 592 aa17.41■□□□□ 0.38
PHF1-210ENST00000488767 BCL11BQ9C0K0 894 aaPredicted RBP17.41■□□□□ 0.38
PHF1-210ENST00000488767 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
PHF1-210ENST00000488767 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
PHF1-210ENST00000488767 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
PHF1-210ENST00000488767 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms