RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 CDCA8Q53HL2 280 aa16.61■□□□□ 0.25
HLA-DOB-209ENST00000488325 ARXQ96QS3 562 aa16.61■□□□□ 0.25
HLA-DOB-209ENST00000488325 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
HLA-DOB-209ENST00000488325 MAP3K5Q99683 1374 aa16.61■□□□□ 0.25
HLA-DOB-209ENST00000488325 PEAK1Q9H792 1746 aa16.6■□□□□ 0.25
HLA-DOB-209ENST00000488325 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
HLA-DOB-209ENST00000488325 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
HLA-DOB-209ENST00000488325 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
HLA-DOB-209ENST00000488325 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
HLA-DOB-209ENST00000488325 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
HLA-DOB-209ENST00000488325 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
HLA-DOB-209ENST00000488325 SBNO2Q9Y2G9 1366 aa16.59■□□□□ 0.25
HLA-DOB-209ENST00000488325 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
HLA-DOB-209ENST00000488325 MIER1Q8N108 512 aa16.58■□□□□ 0.24
HLA-DOB-209ENST00000488325 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
HLA-DOB-209ENST00000488325 THRAP3Q9Y2W1 955 aaKnown RBP16.58■□□□□ 0.24
HLA-DOB-209ENST00000488325 SBF2Q86WG5 1849 aa16.58■□□□□ 0.24
HLA-DOB-209ENST00000488325 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
HLA-DOB-209ENST00000488325 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
HLA-DOB-209ENST00000488325 ANP32CO43423 234 aa16.57■□□□□ 0.24
HLA-DOB-209ENST00000488325 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
HLA-DOB-209ENST00000488325 HSPA6P17066 643 aa16.56■□□□□ 0.24
HLA-DOB-209ENST00000488325 TXNRD1Q16881 649 aa16.55■□□□□ 0.24
HLA-DOB-209ENST00000488325 ATP7BP35670 1465 aa16.54■□□□□ 0.24
HLA-DOB-209ENST00000488325 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
HLA-DOB-209ENST00000488325 POGKQ9P215 609 aa16.54■□□□□ 0.24
HLA-DOB-209ENST00000488325 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
HLA-DOB-209ENST00000488325 NUTM2GQ5VZR2 741 aa16.53■□□□□ 0.24
HLA-DOB-209ENST00000488325 LMO7Q8WWI1 1683 aa16.53■□□□□ 0.24
HLA-DOB-209ENST00000488325 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
HLA-DOB-209ENST00000488325 LRRC37A3O60309 1634 aa16.52■□□□□ 0.23
HLA-DOB-209ENST00000488325 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
HLA-DOB-209ENST00000488325 DDB1Q16531 1140 aa16.5■□□□□ 0.23
HLA-DOB-209ENST00000488325 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
HLA-DOB-209ENST00000488325 ATP10DQ9P241 1426 aa16.49■□□□□ 0.23
HLA-DOB-209ENST00000488325 CPDO75976 1380 aa16.49■□□□□ 0.23
HLA-DOB-209ENST00000488325 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
HLA-DOB-209ENST00000488325 MINK1Q8N4C8 1332 aaPredicted RBP16.48■□□□□ 0.23
HLA-DOB-209ENST00000488325 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
HLA-DOB-209ENST00000488325 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
HLA-DOB-209ENST00000488325 CRB1P82279 1406 aa16.47■□□□□ 0.23
HLA-DOB-209ENST00000488325 MARCH10Q8NA82 808 aaPredicted RBP16.47■□□□□ 0.23
HLA-DOB-209ENST00000488325 BCL9O00512 1426 aa16.46■□□□□ 0.23
HLA-DOB-209ENST00000488325 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
HLA-DOB-209ENST00000488325 GPBP1L1Q9HC44 474 aaPredicted RBP16.46■□□□□ 0.23
HLA-DOB-209ENST00000488325 AATKQ6ZMQ8 1374 aa16.46■□□□□ 0.23
HLA-DOB-209ENST00000488325 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
HLA-DOB-209ENST00000488325 NLGN2Q8NFZ4 835 aa16.44■□□□□ 0.22
HLA-DOB-209ENST00000488325 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
HLA-DOB-209ENST00000488325 CAPN15O75808 1086 aa16.43■□□□□ 0.22
HLA-DOB-209ENST00000488325 YBX3P16989 372 aaKnown RBP eCLIP16.43■□□□□ 0.22
HLA-DOB-209ENST00000488325 USP19O94966 1318 aa16.42■□□□□ 0.22
HLA-DOB-209ENST00000488325 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
HLA-DOB-209ENST00000488325 AKAP12Q02952 1782 aa16.41■□□□□ 0.22
HLA-DOB-209ENST00000488325 ADRA2BP18089 450 aa16.41■□□□□ 0.22
HLA-DOB-209ENST00000488325 PANK3Q9H999 370 aa16.41■□□□□ 0.22
HLA-DOB-209ENST00000488325 ITSN1Q15811 1721 aa16.41■□□□□ 0.22
HLA-DOB-209ENST00000488325 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
HLA-DOB-209ENST00000488325 POLD1P28340 1107 aa16.4■□□□□ 0.22
HLA-DOB-209ENST00000488325 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
HLA-DOB-209ENST00000488325 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
HLA-DOB-209ENST00000488325 ZNF526Q8TF50 670 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-209ENST00000488325 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-209ENST00000488325 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
HLA-DOB-209ENST00000488325 GCP02774 474 aa16.39■□□□□ 0.21
HLA-DOB-209ENST00000488325 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
HLA-DOB-209ENST00000488325 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
HLA-DOB-209ENST00000488325 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
HLA-DOB-209ENST00000488325 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
HLA-DOB-209ENST00000488325 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
HLA-DOB-209ENST00000488325 COL13A1Q5TAT6 717 aaPredicted RBP16.37■□□□□ 0.21
HLA-DOB-209ENST00000488325 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
HLA-DOB-209ENST00000488325 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
HLA-DOB-209ENST00000488325 ADCY9O60503 1353 aa16.37■□□□□ 0.21
HLA-DOB-209ENST00000488325 PER1O15534 1290 aaPredicted RBP16.36■□□□□ 0.21
HLA-DOB-209ENST00000488325 RALBP1Q15311 655 aa16.36■□□□□ 0.21
HLA-DOB-209ENST00000488325 CDCA7Q9BWT1 371 aaPredicted RBP16.36■□□□□ 0.21
HLA-DOB-209ENST00000488325 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
HLA-DOB-209ENST00000488325 ACEP12821 1306 aa16.36■□□□□ 0.21
HLA-DOB-209ENST00000488325 APLP1P51693 650 aa16.35■□□□□ 0.21
HLA-DOB-209ENST00000488325 NLRP13Q86W25 1043 aa16.35■□□□□ 0.21
HLA-DOB-209ENST00000488325 DNAJC5GQ8N7S2 189 aa16.35■□□□□ 0.21
HLA-DOB-209ENST00000488325 COL24A1Q17RW2 1714 aa16.35■□□□□ 0.21
HLA-DOB-209ENST00000488325 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
HLA-DOB-209ENST00000488325 CABP2Q9NPB3 220 aa16.34■□□□□ 0.21
HLA-DOB-209ENST00000488325 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
HLA-DOB-209ENST00000488325 PRELPP51888 382 aa16.33■□□□□ 0.2
HLA-DOB-209ENST00000488325 CDK19Q9BWU1 502 aa16.33■□□□□ 0.2
HLA-DOB-209ENST00000488325 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
HLA-DOB-209ENST00000488325 LRRC4BQ9NT99 713 aa16.32■□□□□ 0.2
HLA-DOB-209ENST00000488325 NPC1L1Q9UHC9 1359 aa16.32■□□□□ 0.2
HLA-DOB-209ENST00000488325 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
HLA-DOB-209ENST00000488325 EXOC5O00471 708 aa16.31■□□□□ 0.2
HLA-DOB-209ENST00000488325 KIF3CO14782 793 aa16.31■□□□□ 0.2
HLA-DOB-209ENST00000488325 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
HLA-DOB-209ENST00000488325 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
HLA-DOB-209ENST00000488325 PNPLA7Q6ZV29 1317 aa16.3■□□□□ 0.2
HLA-DOB-209ENST00000488325 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
HLA-DOB-209ENST00000488325 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
HLA-DOB-209ENST00000488325 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms