RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 AMPHP49418 695 aa14.12□□□□□ -0.15
HLA-DMB-261ENST00000487996 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
HLA-DMB-261ENST00000487996 HAP1P54257 671 aaPredicted RBP14.11□□□□□ -0.15
HLA-DMB-261ENST00000487996 LTN1O94822 1766 aa14.11□□□□□ -0.15
HLA-DMB-261ENST00000487996 CRYBG1Q9Y4K1 1723 aa14.11□□□□□ -0.15
HLA-DMB-261ENST00000487996 FAM9BQ8IZU0 186 aa14.1□□□□□ -0.15
HLA-DMB-261ENST00000487996 COL22A1Q8NFW1 1626 aaPredicted RBP14.1□□□□□ -0.15
HLA-DMB-261ENST00000487996 ABCC6O95255 1503 aa14.1□□□□□ -0.15
HLA-DMB-261ENST00000487996 DIAPH1O60610 1272 aaKnown RBP14.1□□□□□ -0.15
HLA-DMB-261ENST00000487996 FBLN1P23142 703 aa14.1□□□□□ -0.15
HLA-DMB-261ENST00000487996 COL3A1P02461 1466 aaPredicted RBP14.09□□□□□ -0.15
HLA-DMB-261ENST00000487996 CPDO75976 1380 aa14.08□□□□□ -0.15
HLA-DMB-261ENST00000487996 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.16
HLA-DMB-261ENST00000487996 BLMP54132 1417 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMB-261ENST00000487996 IP6K1Q92551 441 aa14.07□□□□□ -0.16
HLA-DMB-261ENST00000487996 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
HLA-DMB-261ENST00000487996 PEAK1Q9H792 1746 aa14.07□□□□□ -0.16
HLA-DMB-261ENST00000487996 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
HLA-DMB-261ENST00000487996 HOXC9P31274 260 aa14.07□□□□□ -0.16
HLA-DMB-261ENST00000487996 SHPRHQ149N8 1683 aa14.07□□□□□ -0.16
HLA-DMB-261ENST00000487996 CABLES1Q8TDN4 633 aa14.06□□□□□ -0.16
HLA-DMB-261ENST00000487996 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
HLA-DMB-261ENST00000487996 ZC3H6P61129 1189 aaKnown RBP14.05□□□□□ -0.16
HLA-DMB-261ENST00000487996 HSP90AB2PQ58FF8 381 aa14.05□□□□□ -0.16
HLA-DMB-261ENST00000487996 JCADQ9P266 1359 aa14.05□□□□□ -0.16
HLA-DMB-261ENST00000487996 ZBTB7CA1YPR0 619 aa14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 U2SURPO15042 1029 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 KIAA0232Q92628 1395 aa14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 IL13P35225 146 aa14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 PRDM11Q9NQV5 511 aa14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 ADAMTS8Q9UP79 889 aa14.04□□□□□ -0.16
HLA-DMB-261ENST00000487996 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
HLA-DMB-261ENST00000487996 NEFMP07197 916 aa14.02□□□□□ -0.16
HLA-DMB-261ENST00000487996 FCHSD2O94868 740 aa14.01□□□□□ -0.17
HLA-DMB-261ENST00000487996 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMB-261ENST00000487996 SPATA31A6Q5VVP1 1343 aa14□□□□□ -0.17
HLA-DMB-261ENST00000487996 COL18A1P39060 1754 aa14□□□□□ -0.17
HLA-DMB-261ENST00000487996 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
HLA-DMB-261ENST00000487996 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
HLA-DMB-261ENST00000487996 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
HLA-DMB-261ENST00000487996 RGPD1P0DJD0 1748 aa13.99□□□□□ -0.17
HLA-DMB-261ENST00000487996 ERBB3P21860 1342 aa13.99□□□□□ -0.17
HLA-DMB-261ENST00000487996 COL14A1Q05707 1796 aaKnown RBP13.99□□□□□ -0.17
HLA-DMB-261ENST00000487996 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 IGSF1Q8N6C5 1336 aa13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 CHRNA2Q15822 529 aa13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 LTV1Q96GA3 475 aaPredicted RBP13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
HLA-DMB-261ENST00000487996 RGPD5Q99666 1765 aa13.97□□□□□ -0.17
HLA-DMB-261ENST00000487996 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
HLA-DMB-261ENST00000487996 AXIN2Q9Y2T1 843 aa13.97□□□□□ -0.17
HLA-DMB-261ENST00000487996 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
HLA-DMB-261ENST00000487996 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
HLA-DMB-261ENST00000487996 EYA1Q99502 592 aa13.96□□□□□ -0.17
HLA-DMB-261ENST00000487996 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
HLA-DMB-261ENST00000487996 KDRP35968 1356 aa13.96□□□□□ -0.17
HLA-DMB-261ENST00000487996 SULT6B1Q6IMI4 303 aa13.95□□□□□ -0.18
HLA-DMB-261ENST00000487996 FAM83GA6ND36 823 aa13.95□□□□□ -0.18
HLA-DMB-261ENST00000487996 NUTM2BA6NNL0 878 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMB-261ENST00000487996 NUTM2EB1AL46 878 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMB-261ENST00000487996 HMOX1P09601 288 aa13.95□□□□□ -0.18
HLA-DMB-261ENST00000487996 PRKAR2BP31323 418 aa13.95□□□□□ -0.18
HLA-DMB-261ENST00000487996 NUTM2AQ8IVF1 878 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMB-261ENST00000487996 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
HLA-DMB-261ENST00000487996 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
HLA-DMB-261ENST00000487996 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
HLA-DMB-261ENST00000487996 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
HLA-DMB-261ENST00000487996 EVA1CP58658 441 aa13.94□□□□□ -0.18
HLA-DMB-261ENST00000487996 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
HLA-DMB-261ENST00000487996 PLEKHG2Q9H7P9 1386 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 NLRP2Q9NX02 1062 aa13.93□□□□□ -0.18
HLA-DMB-261ENST00000487996 NWD2Q9ULI1 1742 aa13.92□□□□□ -0.18
HLA-DMB-261ENST00000487996 APAF1O14727 1248 aa13.92□□□□□ -0.18
HLA-DMB-261ENST00000487996 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
HLA-DMB-261ENST00000487996 PLCH1Q4KWH8 1693 aa13.91□□□□□ -0.18
HLA-DMB-261ENST00000487996 TOM1L2Q6ZVM7 507 aa13.91□□□□□ -0.18
HLA-DMB-261ENST00000487996 AEBP1Q8IUX7 1158 aa13.91□□□□□ -0.18
HLA-DMB-261ENST00000487996 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
HLA-DMB-261ENST00000487996 RGPD2P0DJD1 1756 aa13.9□□□□□ -0.18
HLA-DMB-261ENST00000487996 MEX3CQ5U5Q3 659 aaKnown RBP13.9□□□□□ -0.18
HLA-DMB-261ENST00000487996 RAPGEF4Q8WZA2 1011 aa13.9□□□□□ -0.18
HLA-DMB-261ENST00000487996 STRN4Q9NRL3 753 aa13.9□□□□□ -0.18
HLA-DMB-261ENST00000487996 CRB1P82279 1406 aa13.89□□□□□ -0.19
HLA-DMB-261ENST00000487996 CENPBP07199 599 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-261ENST00000487996 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
HLA-DMB-261ENST00000487996 CCDC27Q2M243 656 aa13.89□□□□□ -0.19
HLA-DMB-261ENST00000487996 GAS2L2Q8NHY3 880 aa13.89□□□□□ -0.19
HLA-DMB-261ENST00000487996 CARD10Q9BWT7 1032 aa13.89□□□□□ -0.19
HLA-DMB-261ENST00000487996 SLIT2O94813 1529 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms