RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 SMG6Q86US8 1419 aaKnown RBP18.92■□□□□ 0.62
NUP188-207ENST00000487952 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
NUP188-207ENST00000487952 ABCC6O95255 1503 aa18.91■□□□□ 0.62
NUP188-207ENST00000487952 BTG4Q9NY30 223 aa18.91■□□□□ 0.62
NUP188-207ENST00000487952 LTN1O94822 1766 aa18.91■□□□□ 0.62
NUP188-207ENST00000487952 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
NUP188-207ENST00000487952 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
NUP188-207ENST00000487952 CDK12Q9NYV4 1490 aaPredicted RBP18.9■□□□□ 0.62
NUP188-207ENST00000487952 EVA1CP58658 441 aa18.9■□□□□ 0.62
NUP188-207ENST00000487952 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
NUP188-207ENST00000487952 CSB-PGBD3P0DP91 1061 aa18.89■□□□□ 0.61
NUP188-207ENST00000487952 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.61
NUP188-207ENST00000487952 INSRP06213 1382 aa18.89■□□□□ 0.61
NUP188-207ENST00000487952 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
NUP188-207ENST00000487952 STRN4Q9NRL3 753 aa18.88■□□□□ 0.61
NUP188-207ENST00000487952 AXIN2Q9Y2T1 843 aa18.88■□□□□ 0.61
NUP188-207ENST00000487952 AFF2P51816 1311 aa18.87■□□□□ 0.61
NUP188-207ENST00000487952 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
NUP188-207ENST00000487952 USP21Q9UK80 565 aa18.86■□□□□ 0.61
NUP188-207ENST00000487952 LMO7Q8WWI1 1683 aa18.85■□□□□ 0.61
NUP188-207ENST00000487952 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
NUP188-207ENST00000487952 SLIT2O94813 1529 aa18.85■□□□□ 0.61
NUP188-207ENST00000487952 ERBB3P21860 1342 aa18.85■□□□□ 0.61
NUP188-207ENST00000487952 DIAPH1O60610 1272 aaKnown RBP18.85■□□□□ 0.61
NUP188-207ENST00000487952 UNC5CLQ8IV45 518 aa18.85■□□□□ 0.61
NUP188-207ENST00000487952 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
NUP188-207ENST00000487952 COL18A1P39060 1754 aa18.85■□□□□ 0.61
NUP188-207ENST00000487952 COL5A2P05997 1499 aaPredicted RBP18.84■□□□□ 0.61
NUP188-207ENST00000487952 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
NUP188-207ENST00000487952 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
NUP188-207ENST00000487952 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
NUP188-207ENST00000487952 PLCH1Q4KWH8 1693 aa18.84■□□□□ 0.61
NUP188-207ENST00000487952 WDR17Q8IZU2 1322 aa18.83■□□□□ 0.61
NUP188-207ENST00000487952 TOM1L2Q6ZVM7 507 aa18.83■□□□□ 0.6
NUP188-207ENST00000487952 MIER1Q8N108 512 aa18.83■□□□□ 0.6
NUP188-207ENST00000487952 MRS2Q9HD23 443 aa18.83■□□□□ 0.6
NUP188-207ENST00000487952 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
NUP188-207ENST00000487952 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
NUP188-207ENST00000487952 NWD2Q9ULI1 1742 aa18.82■□□□□ 0.6
NUP188-207ENST00000487952 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
NUP188-207ENST00000487952 ZNF772Q68DY9 489 aaPredicted RBP18.81■□□□□ 0.6
NUP188-207ENST00000487952 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
NUP188-207ENST00000487952 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
NUP188-207ENST00000487952 IL13P35225 146 aa18.8■□□□□ 0.6
NUP188-207ENST00000487952 BCL9LQ86UU0 1499 aa18.79■□□□□ 0.6
NUP188-207ENST00000487952 RGPD5Q99666 1765 aa18.79■□□□□ 0.6
NUP188-207ENST00000487952 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
NUP188-207ENST00000487952 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
NUP188-207ENST00000487952 NRAPQ86VF7 1730 aa18.78■□□□□ 0.6
NUP188-207ENST00000487952 CRB1P82279 1406 aa18.78■□□□□ 0.6
NUP188-207ENST00000487952 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
NUP188-207ENST00000487952 VPS72Q15906 364 aa18.78■□□□□ 0.6
NUP188-207ENST00000487952 EYA1Q99502 592 aa18.77■□□□□ 0.6
NUP188-207ENST00000487952 CARD10Q9BWT7 1032 aa18.77■□□□□ 0.6
NUP188-207ENST00000487952 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
NUP188-207ENST00000487952 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
NUP188-207ENST00000487952 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
NUP188-207ENST00000487952 CCDC184Q52MB2 194 aa18.76■□□□□ 0.59
NUP188-207ENST00000487952 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
NUP188-207ENST00000487952 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
NUP188-207ENST00000487952 FAM208AQ9UK61 1670 aaKnown RBP18.76■□□□□ 0.59
NUP188-207ENST00000487952 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.75■□□□□ 0.59
NUP188-207ENST00000487952 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
NUP188-207ENST00000487952 QTRT2Q9H974 415 aaKnown RBP18.75■□□□□ 0.59
NUP188-207ENST00000487952 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
NUP188-207ENST00000487952 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
NUP188-207ENST00000487952 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
NUP188-207ENST00000487952 ATRNO75882 1429 aa18.74■□□□□ 0.59
NUP188-207ENST00000487952 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
NUP188-207ENST00000487952 SPATA31A1Q5TZJ5 1347 aa18.74■□□□□ 0.59
NUP188-207ENST00000487952 SULT6B1Q6IMI4 303 aa18.73■□□□□ 0.59
NUP188-207ENST00000487952 HMOX1P09601 288 aa18.72■□□□□ 0.59
NUP188-207ENST00000487952 RAPGEF4Q8WZA2 1011 aa18.72■□□□□ 0.59
NUP188-207ENST00000487952 GJD4Q96KN9 370 aaPredicted RBP18.72■□□□□ 0.59
NUP188-207ENST00000487952 THRAP3Q9Y2W1 955 aaKnown RBP18.72■□□□□ 0.59
NUP188-207ENST00000487952 A0A0G2JS52 829 aa18.7■□□□□ 0.58
NUP188-207ENST00000487952 NEFMP07197 916 aa18.7■□□□□ 0.58
NUP188-207ENST00000487952 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
NUP188-207ENST00000487952 MYT1Q01538 1121 aa18.7■□□□□ 0.58
NUP188-207ENST00000487952 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
NUP188-207ENST00000487952 IL2RBP14784 551 aa18.69■□□□□ 0.58
NUP188-207ENST00000487952 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
NUP188-207ENST00000487952 PNISRQ8TF01 805 aaKnown RBP18.69■□□□□ 0.58
NUP188-207ENST00000487952 NCAPD2Q15021 1401 aa18.68■□□□□ 0.58
NUP188-207ENST00000487952 FCHSD2O94868 740 aa18.68■□□□□ 0.58
NUP188-207ENST00000487952 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
NUP188-207ENST00000487952 FAM98CQ17RN3 349 aaKnown RBP18.68■□□□□ 0.58
NUP188-207ENST00000487952 FAM9BQ8IZU0 186 aa18.68■□□□□ 0.58
NUP188-207ENST00000487952 CDCA7Q9BWT1 371 aaPredicted RBP18.68■□□□□ 0.58
NUP188-207ENST00000487952 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
NUP188-207ENST00000487952 RGPD1P0DJD0 1748 aa18.67■□□□□ 0.58
NUP188-207ENST00000487952 BARGINQ6ZT62 677 aa18.67■□□□□ 0.58
NUP188-207ENST00000487952 RGS17Q9UGC6 210 aaPredicted RBP18.67■□□□□ 0.58
NUP188-207ENST00000487952 ADAMTS8Q9UP79 889 aa18.67■□□□□ 0.58
NUP188-207ENST00000487952 KDRP35968 1356 aa18.67■□□□□ 0.58
NUP188-207ENST00000487952 RXRBP28702 533 aa18.66■□□□□ 0.58
NUP188-207ENST00000487952 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
NUP188-207ENST00000487952 RSPH6AQ9H0K4 717 aa18.66■□□□□ 0.58
NUP188-207ENST00000487952 MAPK8IP3Q9UPT6 1336 aa18.65■□□□□ 0.58
NUP188-207ENST00000487952 GLI3P10071 1580 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms