RNA–Protein interactions for RNA: ENST00000487902.5

PDE6B-210, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-210ENST00000487902 CRB1P82279 1406 aa24.44■■□□□ 1.5
PDE6B-210ENST00000487902 LARP1Q6PKG0 1096 aaKnown RBP24.42■■□□□ 1.5
PDE6B-210ENST00000487902 BARGINQ6ZT62 677 aa24.42■■□□□ 1.5
PDE6B-210ENST00000487902 TCP11L2Q8N4U5 519 aa24.42■■□□□ 1.5
PDE6B-210ENST00000487902 UPF1Q92900 1129 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDE6B-210ENST00000487902 KIF20BQ96Q89 1820 aa24.41■■□□□ 1.5
PDE6B-210ENST00000487902 FYB1O15117 783 aa24.41■■□□□ 1.5
PDE6B-210ENST00000487902 KRT27Q7Z3Y8 459 aa24.41■■□□□ 1.5
PDE6B-210ENST00000487902 LTN1O94822 1766 aa24.41■■□□□ 1.5
PDE6B-210ENST00000487902 CGNL1Q0VF96 1302 aa24.4■■□□□ 1.5
PDE6B-210ENST00000487902 WDR17Q8IZU2 1322 aa24.4■■□□□ 1.5
PDE6B-210ENST00000487902 CCDC125Q86Z20 511 aa24.4■■□□□ 1.5
PDE6B-210ENST00000487902 NSD3Q9BZ95 1437 aa24.4■■□□□ 1.5
PDE6B-210ENST00000487902 BRWD3Q6RI45 1802 aa24.4■■□□□ 1.5
PDE6B-210ENST00000487902 CSB-PGBD3P0DP91 1061 aa24.39■■□□□ 1.49
PDE6B-210ENST00000487902 TOM1L2Q6ZVM7 507 aa24.39■■□□□ 1.49
PDE6B-210ENST00000487902 USP35Q9P2H5 1018 aa24.39■■□□□ 1.49
PDE6B-210ENST00000487902 THSD7AQ9UPZ6 1657 aa24.37■■□□□ 1.49
PDE6B-210ENST00000487902 BLMP54132 1417 aaPredicted RBP24.37■■□□□ 1.49
PDE6B-210ENST00000487902 GGNBP2Q9H3C7 697 aa24.37■■□□□ 1.49
PDE6B-210ENST00000487902 AXIN2Q9Y2T1 843 aa24.37■■□□□ 1.49
PDE6B-210ENST00000487902 CDCA7Q9BWT1 371 aaPredicted RBP24.36■■□□□ 1.49
PDE6B-210ENST00000487902 CARD14Q9BXL6 1004 aa24.36■■□□□ 1.49
PDE6B-210ENST00000487902 RGPD5Q99666 1765 aa24.36■■□□□ 1.49
PDE6B-210ENST00000487902 CARD10Q9BWT7 1032 aa24.34■■□□□ 1.49
PDE6B-210ENST00000487902 CCDC7Q96M83 1385 aa24.33■■□□□ 1.49
PDE6B-210ENST00000487902 AMPHP49418 695 aa24.33■■□□□ 1.49
PDE6B-210ENST00000487902 IP6K1Q92551 441 aa24.33■■□□□ 1.49
PDE6B-210ENST00000487902 RTL1A6NKG5 1358 aa24.32■■□□□ 1.48
PDE6B-210ENST00000487902 ERBB3P21860 1342 aa24.32■■□□□ 1.48
PDE6B-210ENST00000487902 C11orf95C9JLR9 678 aaPredicted RBP24.31■■□□□ 1.48
PDE6B-210ENST00000487902 PDE3BQ13370 1112 aa24.31■■□□□ 1.48
PDE6B-210ENST00000487902 PANK3Q9H999 370 aa24.31■■□□□ 1.48
PDE6B-210ENST00000487902 KIF24Q5T7B8 1368 aa24.3■■□□□ 1.48
PDE6B-210ENST00000487902 SF3B2Q13435 895 aaKnown RBP24.3■■□□□ 1.48
PDE6B-210ENST00000487902 MAP3K19Q56UN5 1328 aa24.3■■□□□ 1.48
PDE6B-210ENST00000487902 NSD2O96028 1365 aa24.29■■□□□ 1.48
PDE6B-210ENST00000487902 ANKRD24Q8TF21 1146 aa24.29■■□□□ 1.48
PDE6B-210ENST00000487902 FAM208AQ9UK61 1670 aaKnown RBP24.29■■□□□ 1.48
PDE6B-210ENST00000487902 PARP4Q9UKK3 1724 aaKnown RBP24.29■■□□□ 1.48
PDE6B-210ENST00000487902 KIF7Q2M1P5 1343 aa24.29■■□□□ 1.48
PDE6B-210ENST00000487902 NLRP2Q9NX02 1062 aa24.27■■□□□ 1.48
PDE6B-210ENST00000487902 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
PDE6B-210ENST00000487902 HOXC9P31274 260 aa24.26■■□□□ 1.47
PDE6B-210ENST00000487902 FAM196AQ6ZSG2 479 aa24.26■■□□□ 1.47
PDE6B-210ENST00000487902 SMG6Q86US8 1419 aaKnown RBP24.26■■□□□ 1.47
PDE6B-210ENST00000487902 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
PDE6B-210ENST00000487902 DDB1Q16531 1140 aa24.25■■□□□ 1.47
PDE6B-210ENST00000487902 EP400Q96L91 3159 aa24.24■■□□□ 1.47
PDE6B-210ENST00000487902 WNK3Q9BYP7 1800 aa24.24■■□□□ 1.47
PDE6B-210ENST00000487902 RRS1Q15050 365 aaKnown RBP24.23■■□□□ 1.47
PDE6B-210ENST00000487902 FLT4P35916 1363 aa24.23■■□□□ 1.47
PDE6B-210ENST00000487902 EXOC5O00471 708 aa24.2■■□□□ 1.46
PDE6B-210ENST00000487902 INSRP06213 1382 aa24.19■■□□□ 1.46
PDE6B-210ENST00000487902 RGPD1P0DJD0 1748 aa24.19■■□□□ 1.46
PDE6B-210ENST00000487902 IL2RBP14784 551 aa24.19■■□□□ 1.46
PDE6B-210ENST00000487902 LTV1Q96GA3 475 aaPredicted RBP24.19■■□□□ 1.46
PDE6B-210ENST00000487902 LRRC37A3O60309 1634 aa24.18■■□□□ 1.46
PDE6B-210ENST00000487902 FBLN1P23142 703 aa24.18■■□□□ 1.46
PDE6B-210ENST00000487902 OVOS2A0A0G2JMS6 1433 aa24.18■■□□□ 1.46
PDE6B-210ENST00000487902 DISP2A7MBM2 1401 aa24.18■■□□□ 1.46
PDE6B-210ENST00000487902 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
PDE6B-210ENST00000487902 BAG6P46379 1132 aa24.16■■□□□ 1.46
PDE6B-210ENST00000487902 MORC1Q86VD1 984 aa24.16■■□□□ 1.46
PDE6B-210ENST00000487902 WASHC2AQ641Q2 1341 aa24.15■■□□□ 1.46
PDE6B-210ENST00000487902 PPM1GO15355 546 aaPredicted RBP24.14■■□□□ 1.45
PDE6B-210ENST00000487902 FAM182BQ5T319 152 aa24.14■■□□□ 1.45
PDE6B-210ENST00000487902 TNS2Q63HR2 1409 aa24.14■■□□□ 1.45
PDE6B-210ENST00000487902 EMILIN1Q9Y6C2 1016 aa24.13■■□□□ 1.45
PDE6B-210ENST00000487902 HSP90AB2PQ58FF8 381 aa24.12■■□□□ 1.45
PDE6B-210ENST00000487902 PEAK1Q9H792 1746 aa24.11■■□□□ 1.45
PDE6B-210ENST00000487902 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
PDE6B-210ENST00000487902 POLKQ9UBT6 870 aa24.11■■□□□ 1.45
PDE6B-210ENST00000487902 BCL9O00512 1426 aa24.1■■□□□ 1.45
PDE6B-210ENST00000487902 TNNT2P45379 298 aaPredicted RBP24.1■■□□□ 1.45
PDE6B-210ENST00000487902 TRIM37O94972 964 aa24.09■■□□□ 1.45
PDE6B-210ENST00000487902 AMER1Q5JTC6 1135 aaPredicted RBP24.09■■□□□ 1.45
PDE6B-210ENST00000487902 PER1O15534 1290 aaPredicted RBP24.08■■□□□ 1.45
PDE6B-210ENST00000487902 RAPGEF4Q8WZA2 1011 aa24.08■■□□□ 1.45
PDE6B-210ENST00000487902 NPC1L1Q9UHC9 1359 aa24.07■■□□□ 1.44
PDE6B-210ENST00000487902 RGPD2P0DJD1 1756 aa24.06■■□□□ 1.44
PDE6B-210ENST00000487902 NBPF6Q5VWK0 638 aa24.06■■□□□ 1.44
PDE6B-210ENST00000487902 MARCH10Q8NA82 808 aaPredicted RBP24.06■■□□□ 1.44
PDE6B-210ENST00000487902 NBPF4Q96M43 638 aa24.06■■□□□ 1.44
PDE6B-210ENST00000487902 TNS1Q9HBL0 1735 aaKnown RBP24.06■■□□□ 1.44
PDE6B-210ENST00000487902 PARD3Q8TEW0 1356 aa24.05■■□□□ 1.44
PDE6B-210ENST00000487902 DEFB132Q7Z7B7 95 aa24.05■■□□□ 1.44
PDE6B-210ENST00000487902 APBA3O96018 575 aa24.04■■□□□ 1.44
PDE6B-210ENST00000487902 TATP17735 454 aaPredicted RBP24.04■■□□□ 1.44
PDE6B-210ENST00000487902 SBF2Q86WG5 1849 aa24.03■■□□□ 1.44
PDE6B-210ENST00000487902 ZCRB1Q8TBF4 217 aaKnown RBP24.02■■□□□ 1.44
PDE6B-210ENST00000487902 BCL11BQ9C0K0 894 aaPredicted RBP24.02■■□□□ 1.44
PDE6B-210ENST00000487902 EN1Q05925 392 aaPredicted RBP23.99■■□□□ 1.43
PDE6B-210ENST00000487902 CC2D1BQ5T0F9 858 aaKnown RBP23.99■■□□□ 1.43
PDE6B-210ENST00000487902 USHBP1Q8N6Y0 703 aa23.99■■□□□ 1.43
PDE6B-210ENST00000487902 DDX54Q8TDD1 881 aaKnown RBP23.98■■□□□ 1.43
PDE6B-210ENST00000487902 PLEKHG2Q9H7P9 1386 aa23.98■■□□□ 1.43
PDE6B-210ENST00000487902 NCAPD2Q15021 1401 aa23.98■■□□□ 1.43
PDE6B-210ENST00000487902 MEGF6O75095 1541 aa23.98■■□□□ 1.43
PDE6B-210ENST00000487902 EIF4A2Q14240 407 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms