RNA–Protein interactions for RNA: ENST00000487897.5

PRKCD-206, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-206ENST00000487897 OVOS2A0A0J9YW53 1432 aa23.51■■□□□ 1.35
PRKCD-206ENST00000487897 OVOS2Q6IE36 1432 aa23.51■■□□□ 1.35
PRKCD-206ENST00000487897 COG3Q96JB2 828 aa23.51■■□□□ 1.35
PRKCD-206ENST00000487897 THRAP3Q9Y2W1 955 aaKnown RBP23.51■■□□□ 1.35
PRKCD-206ENST00000487897 COL18A1P39060 1754 aa23.5■■□□□ 1.35
PRKCD-206ENST00000487897 BRWD3Q6RI45 1802 aa23.5■■□□□ 1.35
PRKCD-206ENST00000487897 CRB1P82279 1406 aa23.5■■□□□ 1.35
PRKCD-206ENST00000487897 FYB1O15117 783 aa23.48■■□□□ 1.35
PRKCD-206ENST00000487897 TOM1L2Q6ZVM7 507 aa23.48■■□□□ 1.35
PRKCD-206ENST00000487897 WDR17Q8IZU2 1322 aa23.48■■□□□ 1.35
PRKCD-206ENST00000487897 THSD7AQ9UPZ6 1657 aa23.48■■□□□ 1.35
PRKCD-206ENST00000487897 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
PRKCD-206ENST00000487897 ABCC6O95255 1503 aa23.46■■□□□ 1.35
PRKCD-206ENST00000487897 CARD14Q9BXL6 1004 aa23.46■■□□□ 1.35
PRKCD-206ENST00000487897 CSB-PGBD3P0DP91 1061 aa23.45■■□□□ 1.34
PRKCD-206ENST00000487897 GGNBP2Q9H3C7 697 aa23.44■■□□□ 1.34
PRKCD-206ENST00000487897 BLMP54132 1417 aaPredicted RBP23.43■■□□□ 1.34
PRKCD-206ENST00000487897 MYOM1P52179 1685 aa23.43■■□□□ 1.34
PRKCD-206ENST00000487897 CARD10Q9BWT7 1032 aa23.42■■□□□ 1.34
PRKCD-206ENST00000487897 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
PRKCD-206ENST00000487897 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
PRKCD-206ENST00000487897 IP6K1Q92551 441 aa23.4■■□□□ 1.34
PRKCD-206ENST00000487897 NSD3Q9BZ95 1437 aa23.4■■□□□ 1.34
PRKCD-206ENST00000487897 ERBB3P21860 1342 aa23.39■■□□□ 1.34
PRKCD-206ENST00000487897 C11orf95C9JLR9 678 aaPredicted RBP23.39■■□□□ 1.33
PRKCD-206ENST00000487897 FBLN1P23142 703 aa23.39■■□□□ 1.33
PRKCD-206ENST00000487897 SF3B2Q13435 895 aaKnown RBP23.39■■□□□ 1.33
PRKCD-206ENST00000487897 CDCA7Q9BWT1 371 aaPredicted RBP23.39■■□□□ 1.33
PRKCD-206ENST00000487897 EP400Q96L91 3159 aa23.39■■□□□ 1.33
PRKCD-206ENST00000487897 MAP3K19Q56UN5 1328 aa23.38■■□□□ 1.33
PRKCD-206ENST00000487897 RGPD5Q99666 1765 aa23.38■■□□□ 1.33
PRKCD-206ENST00000487897 FAM196AQ6ZSG2 479 aa23.38■■□□□ 1.33
PRKCD-206ENST00000487897 LTN1O94822 1766 aa23.37■■□□□ 1.33
PRKCD-206ENST00000487897 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
PRKCD-206ENST00000487897 CCDC7Q96M83 1385 aa23.37■■□□□ 1.33
PRKCD-206ENST00000487897 AMPHP49418 695 aa23.36■■□□□ 1.33
PRKCD-206ENST00000487897 NLRP2Q9NX02 1062 aa23.36■■□□□ 1.33
PRKCD-206ENST00000487897 CGNL1Q0VF96 1302 aa23.35■■□□□ 1.33
PRKCD-206ENST00000487897 HOXC9P31274 260 aa23.34■■□□□ 1.33
PRKCD-206ENST00000487897 DDB1Q16531 1140 aa23.34■■□□□ 1.33
PRKCD-206ENST00000487897 PANK3Q9H999 370 aa23.34■■□□□ 1.33
PRKCD-206ENST00000487897 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.33
PRKCD-206ENST00000487897 PARP4Q9UKK3 1724 aaKnown RBP23.32■■□□□ 1.32
PRKCD-206ENST00000487897 DEFB132Q7Z7B7 95 aa23.31■■□□□ 1.32
PRKCD-206ENST00000487897 LTV1Q96GA3 475 aaPredicted RBP23.31■■□□□ 1.32
PRKCD-206ENST00000487897 KIF20BQ96Q89 1820 aa23.31■■□□□ 1.32
PRKCD-206ENST00000487897 RTL1A6NKG5 1358 aa23.3■■□□□ 1.32
PRKCD-206ENST00000487897 DISP2A7MBM2 1401 aa23.3■■□□□ 1.32
PRKCD-206ENST00000487897 KIF7Q2M1P5 1343 aa23.3■■□□□ 1.32
PRKCD-206ENST00000487897 BAG6P46379 1132 aa23.29■■□□□ 1.32
PRKCD-206ENST00000487897 EXOC5O00471 708 aa23.28■■□□□ 1.32
PRKCD-206ENST00000487897 TRIM37O94972 964 aa23.28■■□□□ 1.32
PRKCD-206ENST00000487897 IL2RBP14784 551 aa23.27■■□□□ 1.32
PRKCD-206ENST00000487897 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.31
PRKCD-206ENST00000487897 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
PRKCD-206ENST00000487897 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
PRKCD-206ENST00000487897 MARCH10Q8NA82 808 aaPredicted RBP23.25■■□□□ 1.31
PRKCD-206ENST00000487897 HSP90AB2PQ58FF8 381 aa23.24■■□□□ 1.31
PRKCD-206ENST00000487897 FLT4P35916 1363 aa23.24■■□□□ 1.31
PRKCD-206ENST00000487897 WNK3Q9BYP7 1800 aa23.24■■□□□ 1.31
PRKCD-206ENST00000487897 RGPD1P0DJD0 1748 aa23.23■■□□□ 1.31
PRKCD-206ENST00000487897 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
PRKCD-206ENST00000487897 INSRP06213 1382 aa23.23■■□□□ 1.31
PRKCD-206ENST00000487897 EN1Q05925 392 aaPredicted RBP23.22■■□□□ 1.31
PRKCD-206ENST00000487897 KNSTRNQ9Y448 316 aa23.22■■□□□ 1.31
PRKCD-206ENST00000487897 APBA3O96018 575 aa23.21■■□□□ 1.31
PRKCD-206ENST00000487897 NSD2O96028 1365 aa23.21■■□□□ 1.31
PRKCD-206ENST00000487897 FAM208AQ9UK61 1670 aaKnown RBP23.2■■□□□ 1.3
PRKCD-206ENST00000487897 BCL9O00512 1426 aa23.2■■□□□ 1.3
PRKCD-206ENST00000487897 TNS2Q63HR2 1409 aa23.2■■□□□ 1.3
PRKCD-206ENST00000487897 SMG6Q86US8 1419 aaKnown RBP23.2■■□□□ 1.3
PRKCD-206ENST00000487897 PPM1GO15355 546 aaPredicted RBP23.2■■□□□ 1.3
PRKCD-206ENST00000487897 NBPF6Q5VWK0 638 aa23.19■■□□□ 1.3
PRKCD-206ENST00000487897 NBPF4Q96M43 638 aa23.19■■□□□ 1.3
PRKCD-206ENST00000487897 PEAK1Q9H792 1746 aa23.19■■□□□ 1.3
PRKCD-206ENST00000487897 TNNT2P45379 298 aaPredicted RBP23.18■■□□□ 1.3
PRKCD-206ENST00000487897 POLKQ9UBT6 870 aa23.18■■□□□ 1.3
PRKCD-206ENST00000487897 TNS1Q9HBL0 1735 aaKnown RBP23.17■■□□□ 1.3
PRKCD-206ENST00000487897 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
PRKCD-206ENST00000487897 CAMKK2Q96RR4 588 aa23.17■■□□□ 1.3
PRKCD-206ENST00000487897 EZH2Q15910 746 aaKnown RBP23.15■■□□□ 1.3
PRKCD-206ENST00000487897 MORC1Q86VD1 984 aa23.15■■□□□ 1.3
PRKCD-206ENST00000487897 BCL11BQ9C0K0 894 aaPredicted RBP23.15■■□□□ 1.3
PRKCD-206ENST00000487897 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.3
PRKCD-206ENST00000487897 AMER1Q5JTC6 1135 aaPredicted RBP23.14■■□□□ 1.29
PRKCD-206ENST00000487897 ANKRD26Q9UPS8 1709 aa23.13■■□□□ 1.29
PRKCD-206ENST00000487897 PER1O15534 1290 aaPredicted RBP23.13■■□□□ 1.29
PRKCD-206ENST00000487897 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
PRKCD-206ENST00000487897 PTF1AQ7RTS3 328 aa23.11■■□□□ 1.29
PRKCD-206ENST00000487897 DDX54Q8TDD1 881 aaKnown RBP23.11■■□□□ 1.29
PRKCD-206ENST00000487897 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
PRKCD-206ENST00000487897 MAP2P11137 1827 aaKnown RBP23.1■■□□□ 1.29
PRKCD-206ENST00000487897 RGPD2P0DJD1 1756 aa23.1■■□□□ 1.29
PRKCD-206ENST00000487897 ZCRB1Q8TBF4 217 aaKnown RBP23.1■■□□□ 1.29
PRKCD-206ENST00000487897 MEGF6O75095 1541 aa23.09■■□□□ 1.29
PRKCD-206ENST00000487897 PLSCR1O15162 318 aa23.09■■□□□ 1.29
PRKCD-206ENST00000487897 SBF2Q86WG5 1849 aa23.08■■□□□ 1.29
PRKCD-206ENST00000487897 TATP17735 454 aaPredicted RBP23.08■■□□□ 1.29
PRKCD-206ENST00000487897 KCNQ2O43526 872 aa23.07■■□□□ 1.28
PRKCD-206ENST00000487897 EIF4A2Q14240 407 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms