RNA–Protein interactions for RNA: ENST00000487820.1

CTTNBP2-212, Transcript of cortactin binding protein 2, humanhuman

TSL 3

Gene CTTNBP2, Length 379 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-212ENST00000487820 EVA1CP58658 441 aa16.73■□□□□ 0.27
CTTNBP2-212ENST00000487820 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
CTTNBP2-212ENST00000487820 RRS1Q15050 365 aaKnown RBP16.72■□□□□ 0.27
CTTNBP2-212ENST00000487820 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
CTTNBP2-212ENST00000487820 COL5A2P05997 1499 aaPredicted RBP16.72■□□□□ 0.27
CTTNBP2-212ENST00000487820 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
CTTNBP2-212ENST00000487820 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
CTTNBP2-212ENST00000487820 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
CTTNBP2-212ENST00000487820 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
CTTNBP2-212ENST00000487820 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
CTTNBP2-212ENST00000487820 A0A0G2JS52 829 aa16.69■□□□□ 0.26
CTTNBP2-212ENST00000487820 MYT1Q01538 1121 aa16.69■□□□□ 0.26
CTTNBP2-212ENST00000487820 CNGB1Q14028 1251 aaPredicted RBP16.69■□□□□ 0.26
CTTNBP2-212ENST00000487820 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
CTTNBP2-212ENST00000487820 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
CTTNBP2-212ENST00000487820 SOCS7O14512 581 aa16.68■□□□□ 0.26
CTTNBP2-212ENST00000487820 TNNT2P45379 298 aaPredicted RBP16.68■□□□□ 0.26
CTTNBP2-212ENST00000487820 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
CTTNBP2-212ENST00000487820 LTV1Q96GA3 475 aaPredicted RBP16.67■□□□□ 0.26
CTTNBP2-212ENST00000487820 BRWD3Q6RI45 1802 aa16.67■□□□□ 0.26
CTTNBP2-212ENST00000487820 CSB-PGBD3P0DP91 1061 aa16.66■□□□□ 0.26
CTTNBP2-212ENST00000487820 TOM1L2Q6ZVM7 507 aa16.66■□□□□ 0.26
CTTNBP2-212ENST00000487820 PEAK1Q9H792 1746 aa16.65■□□□□ 0.26
CTTNBP2-212ENST00000487820 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
CTTNBP2-212ENST00000487820 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
CTTNBP2-212ENST00000487820 AMPHP49418 695 aa16.65■□□□□ 0.26
CTTNBP2-212ENST00000487820 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
CTTNBP2-212ENST00000487820 EMILIN1Q9Y6C2 1016 aa16.65■□□□□ 0.26
CTTNBP2-212ENST00000487820 CRB1P82279 1406 aa16.64■□□□□ 0.25
CTTNBP2-212ENST00000487820 HOXC9P31274 260 aa16.64■□□□□ 0.25
CTTNBP2-212ENST00000487820 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
CTTNBP2-212ENST00000487820 IP6K1Q92551 441 aa16.64■□□□□ 0.25
CTTNBP2-212ENST00000487820 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
CTTNBP2-212ENST00000487820 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
CTTNBP2-212ENST00000487820 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 ONECUT3O60422 494 aaPredicted RBP16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 CC2D1BQ5T0F9 858 aaKnown RBP16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 FAM182BQ5T319 152 aa16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 TCP11L2Q8N4U5 519 aa16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 ERBB3P21860 1342 aa16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
CTTNBP2-212ENST00000487820 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
CTTNBP2-212ENST00000487820 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
CTTNBP2-212ENST00000487820 ABCC6O95255 1503 aa16.61■□□□□ 0.25
CTTNBP2-212ENST00000487820 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
CTTNBP2-212ENST00000487820 HSP90AB2PQ58FF8 381 aa16.6■□□□□ 0.25
CTTNBP2-212ENST00000487820 MORC1Q86VD1 984 aa16.6■□□□□ 0.25
CTTNBP2-212ENST00000487820 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
CTTNBP2-212ENST00000487820 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
CTTNBP2-212ENST00000487820 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
CTTNBP2-212ENST00000487820 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
CTTNBP2-212ENST00000487820 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
CTTNBP2-212ENST00000487820 NSD2O96028 1365 aa16.58■□□□□ 0.24
CTTNBP2-212ENST00000487820 WNK3Q9BYP7 1800 aa16.57■□□□□ 0.24
CTTNBP2-212ENST00000487820 RTL1A6NKG5 1358 aa16.57■□□□□ 0.24
CTTNBP2-212ENST00000487820 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
CTTNBP2-212ENST00000487820 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.24
CTTNBP2-212ENST00000487820 FLT4P35916 1363 aa16.56■□□□□ 0.24
CTTNBP2-212ENST00000487820 THRAP3Q9Y2W1 955 aaKnown RBP16.56■□□□□ 0.24
CTTNBP2-212ENST00000487820 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
CTTNBP2-212ENST00000487820 INSRP06213 1382 aa16.54■□□□□ 0.24
CTTNBP2-212ENST00000487820 NBPF6Q5VWK0 638 aa16.54■□□□□ 0.24
CTTNBP2-212ENST00000487820 NBPF4Q96M43 638 aa16.54■□□□□ 0.24
CTTNBP2-212ENST00000487820 LRRC37A3O60309 1634 aa16.54■□□□□ 0.24
CTTNBP2-212ENST00000487820 PARP4Q9UKK3 1724 aaKnown RBP16.53■□□□□ 0.24
CTTNBP2-212ENST00000487820 DDX10Q13206 875 aaKnown RBP16.53■□□□□ 0.24
CTTNBP2-212ENST00000487820 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
CTTNBP2-212ENST00000487820 EP400Q96L91 3159 aa16.52■□□□□ 0.23
CTTNBP2-212ENST00000487820 PDE3BQ13370 1112 aa16.51■□□□□ 0.23
CTTNBP2-212ENST00000487820 KIF24Q5T7B8 1368 aa16.51■□□□□ 0.23
CTTNBP2-212ENST00000487820 IL2RBP14784 551 aa16.5■□□□□ 0.23
CTTNBP2-212ENST00000487820 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
CTTNBP2-212ENST00000487820 DDB1Q16531 1140 aa16.5■□□□□ 0.23
CTTNBP2-212ENST00000487820 SMG6Q86US8 1419 aaKnown RBP16.5■□□□□ 0.23
CTTNBP2-212ENST00000487820 MEGF6O75095 1541 aa16.49■□□□□ 0.23
CTTNBP2-212ENST00000487820 MTHFSP49914 203 aa16.48■□□□□ 0.23
CTTNBP2-212ENST00000487820 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
CTTNBP2-212ENST00000487820 MARCH10Q8NA82 808 aaPredicted RBP16.47■□□□□ 0.23
CTTNBP2-212ENST00000487820 EYA1Q99502 592 aa16.47■□□□□ 0.23
CTTNBP2-212ENST00000487820 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
CTTNBP2-212ENST00000487820 EXOC5O00471 708 aa16.46■□□□□ 0.23
CTTNBP2-212ENST00000487820 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
CTTNBP2-212ENST00000487820 TRIM37O94972 964 aa16.45■□□□□ 0.22
CTTNBP2-212ENST00000487820 DEFB132Q7Z7B7 95 aa16.44■□□□□ 0.22
CTTNBP2-212ENST00000487820 PTF1AQ7RTS3 328 aa16.43■□□□□ 0.22
CTTNBP2-212ENST00000487820 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
CTTNBP2-212ENST00000487820 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
CTTNBP2-212ENST00000487820 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
CTTNBP2-212ENST00000487820 IL13P35225 146 aa16.42■□□□□ 0.22
CTTNBP2-212ENST00000487820 FAM196AQ6ZSG2 479 aa16.42■□□□□ 0.22
CTTNBP2-212ENST00000487820 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
CTTNBP2-212ENST00000487820 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
CTTNBP2-212ENST00000487820 OVOS2A0A0G2JMS6 1433 aa16.42■□□□□ 0.22
CTTNBP2-212ENST00000487820 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
CTTNBP2-212ENST00000487820 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
CTTNBP2-212ENST00000487820 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
CTTNBP2-212ENST00000487820 IGSF1Q8N6C5 1336 aa16.41■□□□□ 0.22
CTTNBP2-212ENST00000487820 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
CTTNBP2-212ENST00000487820 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms