RNA–Protein interactions for RNA: ENST00000487791.1

HBA1-204, Transcript of hemoglobin subunit alpha 1, humanhuman

TSL 1 (best)

Gene HBA1, Length 410 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1-204ENST00000487791 STRN4Q9NRL3 753 aa31.12■■■□□ 2.57
HBA1-204ENST00000487791 CCDC9Q9Y3X0 531 aaKnown RBP31.12■■■□□ 2.57
HBA1-204ENST00000487791 BCL9LQ86UU0 1499 aa31.12■■■□□ 2.57
HBA1-204ENST00000487791 BLMP54132 1417 aaPredicted RBP31.11■■■□□ 2.57
HBA1-204ENST00000487791 CNGB1Q14028 1251 aaPredicted RBP31.11■■■□□ 2.57
HBA1-204ENST00000487791 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.11■■■□□ 2.57
HBA1-204ENST00000487791 PPM1GO15355 546 aaPredicted RBP31.1■■■□□ 2.57
HBA1-204ENST00000487791 CSB-PGBD3P0DP91 1061 aa31.1■■■□□ 2.57
HBA1-204ENST00000487791 VPS72Q15906 364 aa31.1■■■□□ 2.57
HBA1-204ENST00000487791 FLT4P35916 1363 aa31.09■■■□□ 2.57
HBA1-204ENST00000487791 HOXC9P31274 260 aa31.08■■■□□ 2.57
HBA1-204ENST00000487791 LMO7Q8WWI1 1683 aa31.08■■■□□ 2.57
HBA1-204ENST00000487791 SMG6Q86US8 1419 aaKnown RBP31.07■■■□□ 2.56
HBA1-204ENST00000487791 CAMTA1Q9Y6Y1 1673 aa31.06■■■□□ 2.56
HBA1-204ENST00000487791 FBLN1P23142 703 aa31.06■■■□□ 2.56
HBA1-204ENST00000487791 RXRBP28702 533 aa31.05■■■□□ 2.56
HBA1-204ENST00000487791 RBM6P78332 1123 aaKnown RBP31.05■■■□□ 2.56
HBA1-204ENST00000487791 POLKQ9UBT6 870 aa31.05■■■□□ 2.56
HBA1-204ENST00000487791 RGS17Q9UGC6 210 aaPredicted RBP31.05■■■□□ 2.56
HBA1-204ENST00000487791 AXIN2Q9Y2T1 843 aa31.05■■■□□ 2.56
HBA1-204ENST00000487791 COL5A2P05997 1499 aaPredicted RBP31.05■■■□□ 2.56
HBA1-204ENST00000487791 MAP2P11137 1827 aaKnown RBP31.05■■■□□ 2.56
HBA1-204ENST00000487791 RALBP1Q15311 655 aa31.04■■■□□ 2.56
HBA1-204ENST00000487791 GJD4Q96KN9 370 aaPredicted RBP31.04■■■□□ 2.56
HBA1-204ENST00000487791 ATRNO75882 1429 aa31.04■■■□□ 2.56
HBA1-204ENST00000487791 COL18A1P39060 1754 aa31.04■■■□□ 2.56
HBA1-204ENST00000487791 WDR17Q8IZU2 1322 aa31.03■■■□□ 2.56
HBA1-204ENST00000487791 TOM1L2Q6ZVM7 507 aa31.03■■■□□ 2.56
HBA1-204ENST00000487791 EMILIN1Q9Y6C2 1016 aa31.03■■■□□ 2.56
HBA1-204ENST00000487791 NRAPQ86VF7 1730 aa31.02■■■□□ 2.56
HBA1-204ENST00000487791 ANKRD24Q8TF21 1146 aa31.02■■■□□ 2.56
HBA1-204ENST00000487791 INSRP06213 1382 aa31.02■■■□□ 2.56
HBA1-204ENST00000487791 ERBB3P21860 1342 aa31■■■□□ 2.55
HBA1-204ENST00000487791 CRB1P82279 1406 aa30.99■■■□□ 2.55
HBA1-204ENST00000487791 LARP1Q6PKG0 1096 aaKnown RBP30.98■■■□□ 2.55
HBA1-204ENST00000487791 POTEAQ6S8J7 498 aa30.98■■■□□ 2.55
HBA1-204ENST00000487791 LTV1Q96GA3 475 aaPredicted RBP30.98■■■□□ 2.55
HBA1-204ENST00000487791 THRAP3Q9Y2W1 955 aaKnown RBP30.98■■■□□ 2.55
HBA1-204ENST00000487791 SPATA31A5Q5VU36 1347 aa30.98■■■□□ 2.55
HBA1-204ENST00000487791 SPATA31A7Q8IWB4 1347 aa30.98■■■□□ 2.55
HBA1-204ENST00000487791 HSP90AB2PQ58FF8 381 aa30.97■■■□□ 2.55
HBA1-204ENST00000487791 CFAP53Q96M91 514 aa30.97■■■□□ 2.55
HBA1-204ENST00000487791 NLRP2Q9NX02 1062 aa30.97■■■□□ 2.55
HBA1-204ENST00000487791 MTHFSP49914 203 aa30.96■■■□□ 2.55
HBA1-204ENST00000487791 RGPD5Q99666 1765 aa30.96■■■□□ 2.55
HBA1-204ENST00000487791 PARD3Q8TEW0 1356 aa30.95■■■□□ 2.55
HBA1-204ENST00000487791 TCP11L2Q8N4U5 519 aa30.95■■■□□ 2.55
HBA1-204ENST00000487791 CARD10Q9BWT7 1032 aa30.95■■■□□ 2.55
HBA1-204ENST00000487791 SPATA31A1Q5TZJ5 1347 aa30.95■■■□□ 2.54
HBA1-204ENST00000487791 CDK12Q9NYV4 1490 aaPredicted RBP30.95■■■□□ 2.54
HBA1-204ENST00000487791 USP35Q9P2H5 1018 aa30.94■■■□□ 2.54
HBA1-204ENST00000487791 FAM208AQ9UK61 1670 aaKnown RBP30.93■■■□□ 2.54
HBA1-204ENST00000487791 PPP2R1AP30153 589 aa30.92■■■□□ 2.54
HBA1-204ENST00000487791 CDCA7Q9BWT1 371 aaPredicted RBP30.92■■■□□ 2.54
HBA1-204ENST00000487791 PEAK1Q9H792 1746 aa30.9■■■□□ 2.54
HBA1-204ENST00000487791 A0A0G2JS52 829 aa30.9■■■□□ 2.54
HBA1-204ENST00000487791 ANP32CO43423 234 aa30.9■■■□□ 2.54
HBA1-204ENST00000487791 MYT1Q01538 1121 aa30.9■■■□□ 2.54
HBA1-204ENST00000487791 BARGINQ6ZT62 677 aa30.9■■■□□ 2.54
HBA1-204ENST00000487791 PRKRIP1Q9H875 184 aaPredicted RBP30.86■■■□□ 2.53
HBA1-204ENST00000487791 MYBBP1AQ9BQG0 1328 aaKnown RBP30.86■■■□□ 2.53
HBA1-204ENST00000487791 DIAPH1O60610 1272 aaKnown RBP30.85■■■□□ 2.53
HBA1-204ENST00000487791 FAM98CQ17RN3 349 aaKnown RBP30.85■■■□□ 2.53
HBA1-204ENST00000487791 ONECUT3O60422 494 aaPredicted RBP30.84■■■□□ 2.53
HBA1-204ENST00000487791 GLI3P10071 1580 aa30.83■■■□□ 2.53
HBA1-204ENST00000487791 EIF4A2Q14240 407 aaKnown RBP30.83■■■□□ 2.53
HBA1-204ENST00000487791 NUDCQ9Y266 331 aa30.83■■■□□ 2.53
HBA1-204ENST00000487791 IL2RBP14784 551 aa30.8■■■□□ 2.52
HBA1-204ENST00000487791 NBPF6Q5VWK0 638 aa30.8■■■□□ 2.52
HBA1-204ENST00000487791 RAPGEF4Q8WZA2 1011 aa30.8■■■□□ 2.52
HBA1-204ENST00000487791 NBPF4Q96M43 638 aa30.8■■■□□ 2.52
HBA1-204ENST00000487791 SEPT12Q8IYM1 358 aa30.79■■■□□ 2.52
HBA1-204ENST00000487791 IL13P35225 146 aa30.76■■■□□ 2.51
HBA1-204ENST00000487791 EYA1Q99502 592 aa30.76■■■□□ 2.51
HBA1-204ENST00000487791 TATP17735 454 aaPredicted RBP30.74■■■□□ 2.51
HBA1-204ENST00000487791 PDE3BQ13370 1112 aa30.74■■■□□ 2.51
HBA1-204ENST00000487791 DDB1Q16531 1140 aa30.74■■■□□ 2.51
HBA1-204ENST00000487791 EXOC5O00471 708 aa30.73■■■□□ 2.51
HBA1-204ENST00000487791 RGS12O14924 1447 aa30.73■■■□□ 2.51
HBA1-204ENST00000487791 IGSF1Q8N6C5 1336 aa30.73■■■□□ 2.51
HBA1-204ENST00000487791 U2SURPO15042 1029 aaKnown RBP30.71■■■□□ 2.51
HBA1-204ENST00000487791 USHBP1Q8N6Y0 703 aa30.71■■■□□ 2.51
HBA1-204ENST00000487791 KRT27Q7Z3Y8 459 aa30.7■■■□□ 2.51
HBA1-204ENST00000487791 RGPD2P0DJD1 1756 aa30.69■■■□□ 2.5
HBA1-204ENST00000487791 THSD7AQ9UPZ6 1657 aa30.68■■■□□ 2.5
HBA1-204ENST00000487791 PLEKHG2Q9H7P9 1386 aa30.68■■■□□ 2.5
HBA1-204ENST00000487791 SULT6B1Q6IMI4 303 aa30.67■■■□□ 2.5
HBA1-204ENST00000487791 PARP4Q9UKK3 1724 aaKnown RBP30.67■■■□□ 2.5
HBA1-204ENST00000487791 WNK3Q9BYP7 1800 aa30.66■■■□□ 2.5
HBA1-204ENST00000487791 DISP2A7MBM2 1401 aa30.66■■■□□ 2.5
HBA1-204ENST00000487791 NCAPD2Q15021 1401 aa30.66■■■□□ 2.5
HBA1-204ENST00000487791 COL3A1P02461 1466 aaPredicted RBP30.66■■■□□ 2.5
HBA1-204ENST00000487791 PNNQ9H307 717 aaKnown RBP30.65■■■□□ 2.5
HBA1-204ENST00000487791 SPG7Q9UQ90 795 aa30.65■■■□□ 2.5
HBA1-204ENST00000487791 DIEXFQ68CQ4 756 aaKnown RBP30.64■■■□□ 2.5
HBA1-204ENST00000487791 NEFMP07197 916 aa30.63■■■□□ 2.49
HBA1-204ENST00000487791 U2AF1L5P0DN76 240 aaPredicted RBP30.63■■■□□ 2.49
HBA1-204ENST00000487791 U2AF1Q01081 240 aaKnown RBP eCLIP30.63■■■□□ 2.49
HBA1-204ENST00000487791 ZCRB1Q8TBF4 217 aaKnown RBP30.63■■■□□ 2.49
HBA1-204ENST00000487791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms