RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 KCNMA1Q12791 1236 aa8.78□□□□□ -1
HMGB1P36-201ENST00000487709 ERFEQ4G0M1 354 aa8.78□□□□□ -1
HMGB1P36-201ENST00000487709 KRTAP4-6Q9BYQ5 205 aa8.78□□□□□ -1
HMGB1P36-201ENST00000487709 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
HMGB1P36-201ENST00000487709 TUSC1Q2TAM9 212 aa8.77□□□□□ -1.01
HMGB1P36-201ENST00000487709 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P36-201ENST00000487709 GSK3AP49840 483 aa8.76□□□□□ -1.01
HMGB1P36-201ENST00000487709 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P36-201ENST00000487709 PGPEP1Q9NXJ5 209 aa8.76□□□□□ -1.01
HMGB1P36-201ENST00000487709 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
HMGB1P36-201ENST00000487709 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
HMGB1P36-201ENST00000487709 SUZ12Q15022 739 aaKnown RBP8.74□□□□□ -1.01
HMGB1P36-201ENST00000487709 GPKOWQ92917 476 aaPredicted RBP eCLIP8.74□□□□□ -1.01
HMGB1P36-201ENST00000487709 SLC10A4Q96EP9 437 aa8.74□□□□□ -1.01
HMGB1P36-201ENST00000487709 ARHGAP9Q9BRR9 750 aa8.74□□□□□ -1.01
HMGB1P36-201ENST00000487709 SPINT1O43278 529 aa8.73□□□□□ -1.01
HMGB1P36-201ENST00000487709 CTDSPL2Q05D32 466 aa8.73□□□□□ -1.01
HMGB1P36-201ENST00000487709 RNFT1Q5M7Z0 435 aa8.73□□□□□ -1.01
HMGB1P36-201ENST00000487709 TMEM151AQ8N4L1 468 aa8.73□□□□□ -1.01
HMGB1P36-201ENST00000487709 SVOPQ8N4V2 548 aa8.73□□□□□ -1.01
HMGB1P36-201ENST00000487709 AGBL1Q96MI9 1066 aa8.73□□□□□ -1.01
HMGB1P36-201ENST00000487709 ADAMTS8Q9UP79 889 aa8.73□□□□□ -1.01
HMGB1P36-201ENST00000487709 CDC14CA4D256 554 aa8.72□□□□□ -1.01
HMGB1P36-201ENST00000487709 GDF11O95390 407 aa8.72□□□□□ -1.01
HMGB1P36-201ENST00000487709 RASSF7Q02833 373 aa8.72□□□□□ -1.01
HMGB1P36-201ENST00000487709 Q6ZVU0 165 aa8.72□□□□□ -1.01
HMGB1P36-201ENST00000487709 KCTD15Q96SI1 283 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P36-201ENST00000487709 RELBQ01201 579 aa8.71□□□□□ -1.02
HMGB1P36-201ENST00000487709 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.02
HMGB1P36-201ENST00000487709 RNF225M0QZC1 329 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 CTSOP43234 321 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 ZNF385CQ66K41 422 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 VWA5B2Q8N398 1253 aa8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 NANOS1Q8WY41 292 aaKnown RBP8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 BCANQ96GW7 911 aa8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 INSM2Q96T92 566 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 SLC24A3Q9HC58 644 aa8.7□□□□□ -1.02
HMGB1P36-201ENST00000487709 SLC35F4A4IF30 521 aa8.69□□□□□ -1.02
HMGB1P36-201ENST00000487709 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
HMGB1P36-201ENST00000487709 INTS6LQ5JSJ4 861 aaKnown RBP8.69□□□□□ -1.02
HMGB1P36-201ENST00000487709 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
HMGB1P36-201ENST00000487709 POLMQ9NP87 494 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P36-201ENST00000487709 FKBPLQ9UIM3 349 aa8.69□□□□□ -1.02
HMGB1P36-201ENST00000487709 ITGA6P23229 1130 aa8.68□□□□□ -1.02
HMGB1P36-201ENST00000487709 WHAMMQ8TF30 809 aa8.68□□□□□ -1.02
HMGB1P36-201ENST00000487709 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
HMGB1P36-201ENST00000487709 RAB15P59190 212 aa8.67□□□□□ -1.02
HMGB1P36-201ENST00000487709 NR6A1Q15406 480 aa8.67□□□□□ -1.02
HMGB1P36-201ENST00000487709 ZNF395Q9H8N7 513 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P36-201ENST00000487709 CDV3Q9UKY7 258 aaKnown RBP8.67□□□□□ -1.02
HMGB1P36-201ENST00000487709 SV2AQ7L0J3 742 aa8.66□□□□□ -1.02
HMGB1P36-201ENST00000487709 IRS1P35568 1242 aa8.65□□□□□ -1.02
HMGB1P36-201ENST00000487709 TMPRSS4Q9NRS4 437 aa8.65□□□□□ -1.02
HMGB1P36-201ENST00000487709 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P36-201ENST00000487709 ADAM32Q8TC27 787 aa8.64□□□□□ -1.03
HMGB1P36-201ENST00000487709 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
HMGB1P36-201ENST00000487709 OCSTAMPQ9BR26 566 aa8.64□□□□□ -1.03
HMGB1P36-201ENST00000487709 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
HMGB1P36-201ENST00000487709 PTK2Q05397 1052 aa8.63□□□□□ -1.03
HMGB1P36-201ENST00000487709 FBXO31Q5XUX0 539 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P36-201ENST00000487709 ZNF784Q8NCA9 323 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P36-201ENST00000487709 ZC3H4Q9UPT8 1303 aaKnown RBP8.62□□□□□ -1.03
HMGB1P36-201ENST00000487709 MARSP56192 900 aaKnown RBP8.62□□□□□ -1.03
HMGB1P36-201ENST00000487709 GPAT2Q6NUI2 795 aa8.62□□□□□ -1.03
HMGB1P36-201ENST00000487709 SENP3-EIF4A1A0A087X0R7 540 aa8.61□□□□□ -1.03
HMGB1P36-201ENST00000487709 ARHGEF15O94989 841 aa8.61□□□□□ -1.03
HMGB1P36-201ENST00000487709 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
HMGB1P36-201ENST00000487709 AP1G2O75843 785 aa8.6□□□□□ -1.03
HMGB1P36-201ENST00000487709 ADAMTS2O95450 1211 aa8.6□□□□□ -1.03
HMGB1P36-201ENST00000487709 ADH1AP07327 375 aa8.6□□□□□ -1.03
HMGB1P36-201ENST00000487709 FOXD4L5Q5VV16 416 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P36-201ENST00000487709 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P36-201ENST00000487709 EPS8L1Q8TE68 723 aa8.59□□□□□ -1.03
HMGB1P36-201ENST00000487709 DNMT3AQ9Y6K1 912 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P36-201ENST00000487709 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
HMGB1P36-201ENST00000487709 ADD1P35611 737 aaKnown RBP8.58□□□□□ -1.04
HMGB1P36-201ENST00000487709 LYPD4Q6UWN0 246 aa8.58□□□□□ -1.04
HMGB1P36-201ENST00000487709 CUEDC1Q9NWM3 386 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P36-201ENST00000487709 GPSM3Q9Y4H4 160 aa8.58□□□□□ -1.04
HMGB1P36-201ENST00000487709 MAP3K10Q02779 954 aa8.57□□□□□ -1.04
HMGB1P36-201ENST00000487709 SKIV2LQ15477 1246 aaKnown RBP8.57□□□□□ -1.04
HMGB1P36-201ENST00000487709 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
HMGB1P36-201ENST00000487709 LILRA1O75019 489 aa8.56□□□□□ -1.04
HMGB1P36-201ENST00000487709 RHOQP17081 205 aa8.56□□□□□ -1.04
HMGB1P36-201ENST00000487709 PTGIRP43119 386 aa8.56□□□□□ -1.04
HMGB1P36-201ENST00000487709 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
HMGB1P36-201ENST00000487709 LYSMD3Q7Z3D4 306 aa8.56□□□□□ -1.04
HMGB1P36-201ENST00000487709 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P36-201ENST00000487709 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P36-201ENST00000487709 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
HMGB1P36-201ENST00000487709 GAS6Q14393 721 aa8.55□□□□□ -1.04
HMGB1P36-201ENST00000487709 KANK3Q6NY19 840 aa8.55□□□□□ -1.04
HMGB1P36-201ENST00000487709 PRICKLE2Q7Z3G6 844 aa8.55□□□□□ -1.04
HMGB1P36-201ENST00000487709 KDF1Q8NAX2 398 aaPredicted RBP8.55□□□□□ -1.04
HMGB1P36-201ENST00000487709 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
HMGB1P36-201ENST00000487709 PNMA1Q8ND90 353 aa8.54□□□□□ -1.04
HMGB1P36-201ENST00000487709 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
HMGB1P36-201ENST00000487709 CELA2BP08218 269 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P36-201ENST00000487709 USP17L8P0C7I0 530 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms