RNA–Protein interactions for RNA: ENST00000487703.5

CDK5-205, Transcript of cyclin dependent kinase 5, humanhuman

TSL 5

Gene CDK5, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-205ENST00000487703 RGPD4Q7Z3J3 1758 aa17.6■□□□□ 0.41
CDK5-205ENST00000487703 RGPD5Q99666 1765 aa17.6■□□□□ 0.41
CDK5-205ENST00000487703 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
CDK5-205ENST00000487703 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
CDK5-205ENST00000487703 NBPF14Q5TI25 921 aa17.59■□□□□ 0.41
CDK5-205ENST00000487703 TOM1L2Q6ZVM7 507 aa17.59■□□□□ 0.41
CDK5-205ENST00000487703 TTC21AQ8NDW8 1320 aa17.58■□□□□ 0.4
CDK5-205ENST00000487703 DDB1Q16531 1140 aa17.58■□□□□ 0.4
CDK5-205ENST00000487703 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.4
CDK5-205ENST00000487703 PLSCR1O15162 318 aa17.57■□□□□ 0.4
CDK5-205ENST00000487703 BCL9O00512 1426 aa17.56■□□□□ 0.4
CDK5-205ENST00000487703 MON2Q7Z3U7 1717 aa17.56■□□□□ 0.4
CDK5-205ENST00000487703 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
CDK5-205ENST00000487703 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
CDK5-205ENST00000487703 NFAT5O94916 1531 aa17.56■□□□□ 0.4
CDK5-205ENST00000487703 SBNO2Q9Y2G9 1366 aa17.54■□□□□ 0.4
CDK5-205ENST00000487703 TRIM26Q12899 539 aaPredicted RBP17.54■□□□□ 0.4
CDK5-205ENST00000487703 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
CDK5-205ENST00000487703 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
CDK5-205ENST00000487703 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
CDK5-205ENST00000487703 ABCC6O95255 1503 aa17.53■□□□□ 0.4
CDK5-205ENST00000487703 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
CDK5-205ENST00000487703 MARCH10Q8NA82 808 aaPredicted RBP17.53■□□□□ 0.4
CDK5-205ENST00000487703 PTF1AQ7RTS3 328 aa17.52■□□□□ 0.4
CDK5-205ENST00000487703 SOX12O15370 315 aa17.51■□□□□ 0.39
CDK5-205ENST00000487703 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
CDK5-205ENST00000487703 KCNQ2O43526 872 aa17.5■□□□□ 0.39
CDK5-205ENST00000487703 CSB-PGBD3P0DP91 1061 aa17.5■□□□□ 0.39
CDK5-205ENST00000487703 PROM2Q8N271 834 aa17.5■□□□□ 0.39
CDK5-205ENST00000487703 SPON1Q9HCB6 807 aa17.5■□□□□ 0.39
CDK5-205ENST00000487703 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
CDK5-205ENST00000487703 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
CDK5-205ENST00000487703 CASZ1Q86V15 1759 aa17.49■□□□□ 0.39
CDK5-205ENST00000487703 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
CDK5-205ENST00000487703 EXOC5O00471 708 aa17.47■□□□□ 0.39
CDK5-205ENST00000487703 LTN1O94822 1766 aa17.47■□□□□ 0.39
CDK5-205ENST00000487703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDK5-205ENST00000487703 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
CDK5-205ENST00000487703 TNS2Q63HR2 1409 aa17.46■□□□□ 0.39
CDK5-205ENST00000487703 NME9Q86XW9 330 aa17.45■□□□□ 0.38
CDK5-205ENST00000487703 ERBB3P21860 1342 aa17.45■□□□□ 0.38
CDK5-205ENST00000487703 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
CDK5-205ENST00000487703 PPP1R1BQ9UD71 204 aaPredicted RBP17.44■□□□□ 0.38
CDK5-205ENST00000487703 NHSQ6T4R5 1651 aa17.43■□□□□ 0.38
CDK5-205ENST00000487703 TXNRD1Q16881 649 aa17.43■□□□□ 0.38
CDK5-205ENST00000487703 PDGFDQ9GZP0 370 aaPredicted RBP17.43■□□□□ 0.38
CDK5-205ENST00000487703 SLC12A5Q9H2X9 1139 aa17.43■□□□□ 0.38
CDK5-205ENST00000487703 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
CDK5-205ENST00000487703 HDGFL2Q7Z4V5 671 aaPredicted RBP17.42■□□□□ 0.38
CDK5-205ENST00000487703 TMC1Q8TDI8 760 aa17.42■□□□□ 0.38
CDK5-205ENST00000487703 PUS7Q96PZ0 661 aaKnown RBP17.42■□□□□ 0.38
CDK5-205ENST00000487703 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
CDK5-205ENST00000487703 IL2RBP14784 551 aa17.39■□□□□ 0.37
CDK5-205ENST00000487703 SLC15A2Q16348 729 aa17.39■□□□□ 0.37
CDK5-205ENST00000487703 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
CDK5-205ENST00000487703 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.37
CDK5-205ENST00000487703 PTGER2P43116 358 aa17.38■□□□□ 0.37
CDK5-205ENST00000487703 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
CDK5-205ENST00000487703 STK32BQ9NY57 414 aa17.38■□□□□ 0.37
CDK5-205ENST00000487703 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
CDK5-205ENST00000487703 MYOM1P52179 1685 aa17.37■□□□□ 0.37
CDK5-205ENST00000487703 ZBTB7AO95365 584 aa17.37■□□□□ 0.37
CDK5-205ENST00000487703 YY1P25490 414 aa17.37■□□□□ 0.37
CDK5-205ENST00000487703 BTAF1O14981 1849 aa17.37■□□□□ 0.37
CDK5-205ENST00000487703 PAPPAQ13219 1627 aa17.36■□□□□ 0.37
CDK5-205ENST00000487703 ACSBG1Q96GR2 724 aa17.36■□□□□ 0.37
CDK5-205ENST00000487703 TESK2Q96S53 571 aa17.36■□□□□ 0.37
CDK5-205ENST00000487703 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
CDK5-205ENST00000487703 IP6K1Q92551 441 aa17.35■□□□□ 0.37
CDK5-205ENST00000487703 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
CDK5-205ENST00000487703 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
CDK5-205ENST00000487703 SGIP1Q9BQI5 828 aa17.32■□□□□ 0.36
CDK5-205ENST00000487703 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
CDK5-205ENST00000487703 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
CDK5-205ENST00000487703 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
CDK5-205ENST00000487703 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
CDK5-205ENST00000487703 COG3Q96JB2 828 aa17.29■□□□□ 0.36
CDK5-205ENST00000487703 SYT17Q9BSW7 474 aa17.29■□□□□ 0.36
CDK5-205ENST00000487703 LRRC4BQ9NT99 713 aa17.29■□□□□ 0.36
CDK5-205ENST00000487703 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
CDK5-205ENST00000487703 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
CDK5-205ENST00000487703 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
CDK5-205ENST00000487703 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
CDK5-205ENST00000487703 HOXC9P31274 260 aa17.28■□□□□ 0.36
CDK5-205ENST00000487703 ZNF827Q17R98 1081 aa17.28■□□□□ 0.36
CDK5-205ENST00000487703 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
CDK5-205ENST00000487703 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
CDK5-205ENST00000487703 FBLN1P23142 703 aa17.27■□□□□ 0.36
CDK5-205ENST00000487703 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.36
CDK5-205ENST00000487703 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
CDK5-205ENST00000487703 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
CDK5-205ENST00000487703 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
CDK5-205ENST00000487703 LY75O60449 1722 aa17.24■□□□□ 0.35
CDK5-205ENST00000487703 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
CDK5-205ENST00000487703 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
CDK5-205ENST00000487703 AMPHP49418 695 aa17.24■□□□□ 0.35
CDK5-205ENST00000487703 ARXQ96QS3 562 aa17.24■□□□□ 0.35
CDK5-205ENST00000487703 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
CDK5-205ENST00000487703 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
CDK5-205ENST00000487703 MEGF6O75095 1541 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms