RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 CAPN15O75808 1086 aa18.56■□□□□ 0.56
SGIP1-212ENST00000487507 HSPA6P17066 643 aa18.56■□□□□ 0.56
SGIP1-212ENST00000487507 RGPD5Q99666 1765 aa18.55■□□□□ 0.56
SGIP1-212ENST00000487507 WASLO00401 505 aaPredicted RBP18.55■□□□□ 0.56
SGIP1-212ENST00000487507 MARCH10Q8NA82 808 aaPredicted RBP18.54■□□□□ 0.56
SGIP1-212ENST00000487507 ATP10DQ9P241 1426 aa18.54■□□□□ 0.56
SGIP1-212ENST00000487507 ZNF526Q8TF50 670 aaPredicted RBP18.53■□□□□ 0.56
SGIP1-212ENST00000487507 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
SGIP1-212ENST00000487507 NLGN2Q8NFZ4 835 aa18.52■□□□□ 0.56
SGIP1-212ENST00000487507 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
SGIP1-212ENST00000487507 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
SGIP1-212ENST00000487507 CPDO75976 1380 aa18.51■□□□□ 0.55
SGIP1-212ENST00000487507 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
SGIP1-212ENST00000487507 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
SGIP1-212ENST00000487507 BTAF1O14981 1849 aa18.5■□□□□ 0.55
SGIP1-212ENST00000487507 NHSQ6T4R5 1651 aa18.5■□□□□ 0.55
SGIP1-212ENST00000487507 NUDT16Q96DE0 195 aaKnown RBP18.49■□□□□ 0.55
SGIP1-212ENST00000487507 YBX3P16989 372 aaKnown RBP eCLIP18.48■□□□□ 0.55
SGIP1-212ENST00000487507 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
SGIP1-212ENST00000487507 COL24A1Q17RW2 1714 aa18.47■□□□□ 0.55
SGIP1-212ENST00000487507 ARHGEF28Q8N1W1 1705 aaKnown RBP18.47■□□□□ 0.55
SGIP1-212ENST00000487507 ACEP12821 1306 aa18.47■□□□□ 0.55
SGIP1-212ENST00000487507 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
SGIP1-212ENST00000487507 GCP02774 474 aa18.46■□□□□ 0.55
SGIP1-212ENST00000487507 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
SGIP1-212ENST00000487507 POLD1P28340 1107 aa18.45■□□□□ 0.54
SGIP1-212ENST00000487507 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
SGIP1-212ENST00000487507 USP19O94966 1318 aa18.45■□□□□ 0.54
SGIP1-212ENST00000487507 COL18A1P39060 1754 aa18.45■□□□□ 0.54
SGIP1-212ENST00000487507 AATKQ6ZMQ8 1374 aa18.42■□□□□ 0.54
SGIP1-212ENST00000487507 GRIN3BO60391 1043 aa18.42■□□□□ 0.54
SGIP1-212ENST00000487507 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
SGIP1-212ENST00000487507 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
SGIP1-212ENST00000487507 BCL9O00512 1426 aa18.4■□□□□ 0.54
SGIP1-212ENST00000487507 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
SGIP1-212ENST00000487507 EXOC5O00471 708 aa18.38■□□□□ 0.53
SGIP1-212ENST00000487507 COL13A1Q5TAT6 717 aaPredicted RBP18.38■□□□□ 0.53
SGIP1-212ENST00000487507 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
SGIP1-212ENST00000487507 LRRC4BQ9NT99 713 aa18.37■□□□□ 0.53
SGIP1-212ENST00000487507 WDR17Q8IZU2 1322 aa18.37■□□□□ 0.53
SGIP1-212ENST00000487507 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
SGIP1-212ENST00000487507 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
SGIP1-212ENST00000487507 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
SGIP1-212ENST00000487507 CDCA7Q9BWT1 371 aaPredicted RBP18.35■□□□□ 0.53
SGIP1-212ENST00000487507 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
SGIP1-212ENST00000487507 SLC16A10Q8TF71 515 aa18.34■□□□□ 0.53
SGIP1-212ENST00000487507 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
SGIP1-212ENST00000487507 WDR90Q96KV7 1748 aa18.34■□□□□ 0.53
SGIP1-212ENST00000487507 ADCY9O60503 1353 aa18.33■□□□□ 0.53
SGIP1-212ENST00000487507 APLP1P51693 650 aa18.33■□□□□ 0.52
SGIP1-212ENST00000487507 NLRP6P59044 892 aa18.33■□□□□ 0.52
SGIP1-212ENST00000487507 SLIT3O75094 1523 aa18.33■□□□□ 0.52
SGIP1-212ENST00000487507 USP6P35125 1406 aa18.32■□□□□ 0.52
SGIP1-212ENST00000487507 TNS2Q63HR2 1409 aa18.32■□□□□ 0.52
SGIP1-212ENST00000487507 SOX12O15370 315 aa18.32■□□□□ 0.52
SGIP1-212ENST00000487507 KCNQ4P56696 695 aa18.32■□□□□ 0.52
SGIP1-212ENST00000487507 AKT1S1Q96B36 256 aa18.32■□□□□ 0.52
SGIP1-212ENST00000487507 WWC3Q9ULE0 1092 aa18.32■□□□□ 0.52
SGIP1-212ENST00000487507 CCDC61Q9Y6R9 512 aa18.32■□□□□ 0.52
SGIP1-212ENST00000487507 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
SGIP1-212ENST00000487507 MSH5O43196 834 aa18.31■□□□□ 0.52
SGIP1-212ENST00000487507 TNS4Q8IZW8 715 aa18.31■□□□□ 0.52
SGIP1-212ENST00000487507 TFCP2L1Q9NZI6 479 aa18.31■□□□□ 0.52
SGIP1-212ENST00000487507 PLEKHG3A1L390 1219 aa18.3■□□□□ 0.52
SGIP1-212ENST00000487507 DNAJC5GQ8N7S2 189 aa18.3■□□□□ 0.52
SGIP1-212ENST00000487507 TRPM1Q7Z4N2 1603 aa18.3■□□□□ 0.52
SGIP1-212ENST00000487507 KIF3CO14782 793 aa18.29■□□□□ 0.52
SGIP1-212ENST00000487507 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
SGIP1-212ENST00000487507 CARD10Q9BWT7 1032 aa18.29■□□□□ 0.52
SGIP1-212ENST00000487507 ABCC6O95255 1503 aa18.28■□□□□ 0.52
SGIP1-212ENST00000487507 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
SGIP1-212ENST00000487507 PPIP5K1Q6PFW1 1433 aa18.28■□□□□ 0.52
SGIP1-212ENST00000487507 PRELPP51888 382 aa18.26■□□□□ 0.51
SGIP1-212ENST00000487507 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
SGIP1-212ENST00000487507 HTRA3P83110 453 aa18.25■□□□□ 0.51
SGIP1-212ENST00000487507 LY75O60449 1722 aa18.25■□□□□ 0.51
SGIP1-212ENST00000487507 DCAF11Q8TEB1 546 aa18.24■□□□□ 0.51
SGIP1-212ENST00000487507 CCDC7Q96M83 1385 aa18.23■□□□□ 0.51
SGIP1-212ENST00000487507 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
SGIP1-212ENST00000487507 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
SGIP1-212ENST00000487507 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
SGIP1-212ENST00000487507 LTN1O94822 1766 aa18.2■□□□□ 0.5
SGIP1-212ENST00000487507 ARHGEF25Q86VW2 580 aa18.2■□□□□ 0.5
SGIP1-212ENST00000487507 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
SGIP1-212ENST00000487507 COL23A1Q86Y22 540 aaPredicted RBP18.19■□□□□ 0.5
SGIP1-212ENST00000487507 SYTL4Q96C24 671 aaPredicted RBP18.19■□□□□ 0.5
SGIP1-212ENST00000487507 NLRP2Q9NX02 1062 aa18.18■□□□□ 0.5
SGIP1-212ENST00000487507 TOMM70O94826 608 aa18.17■□□□□ 0.5
SGIP1-212ENST00000487507 KLRG1Q96E93 195 aa18.17■□□□□ 0.5
SGIP1-212ENST00000487507 C5P01031 1676 aa18.16■□□□□ 0.5
SGIP1-212ENST00000487507 CABP1Q9NZU7 370 aa18.16■□□□□ 0.5
SGIP1-212ENST00000487507 CD2APQ9Y5K6 639 aa18.16■□□□□ 0.5
SGIP1-212ENST00000487507 IL2RBP14784 551 aa18.15■□□□□ 0.5
SGIP1-212ENST00000487507 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
SGIP1-212ENST00000487507 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
SGIP1-212ENST00000487507 NFAT5O94916 1531 aa18.13■□□□□ 0.49
SGIP1-212ENST00000487507 SLC34A2O95436 690 aa18.13■□□□□ 0.49
SGIP1-212ENST00000487507 KCNH5Q8NCM2 988 aa18.13■□□□□ 0.49
SGIP1-212ENST00000487507 PCNTO95613 3336 aa18.13■□□□□ 0.49
SGIP1-212ENST00000487507 TAF1LQ8IZX4 1826 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms