RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MMP16P51512 607 aa10.11□□□□□ -0.79
RTFDC1-209ENST00000487211 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
RTFDC1-209ENST00000487211 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
RTFDC1-209ENST00000487211 EVA1BQ9NVM1 165 aa10.1□□□□□ -0.79
RTFDC1-209ENST00000487211 FKBPLQ9UIM3 349 aa10.1□□□□□ -0.79
RTFDC1-209ENST00000487211 PRXQ9BXM0 1461 aa10.1□□□□□ -0.79
RTFDC1-209ENST00000487211 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
RTFDC1-209ENST00000487211 SLC6A16Q9GZN6 736 aa10.09□□□□□ -0.79
RTFDC1-209ENST00000487211 EEA1Q15075 1411 aa10.08□□□□□ -0.8
RTFDC1-209ENST00000487211 KCNH2Q12809 1159 aa10.08□□□□□ -0.8
RTFDC1-209ENST00000487211 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
RTFDC1-209ENST00000487211 CUL7Q14999 1698 aa10.08□□□□□ -0.8
RTFDC1-209ENST00000487211 FAM69CQ0P6D2 419 aa10.07□□□□□ -0.8
RTFDC1-209ENST00000487211 ADAMTS19Q8TE59 1207 aa10.07□□□□□ -0.8
RTFDC1-209ENST00000487211 NKX2-3Q8TAU0 364 aa10.06□□□□□ -0.8
RTFDC1-209ENST00000487211 KIAA0586Q9BVV6 1533 aa10.06□□□□□ -0.8
RTFDC1-209ENST00000487211 NR1H3Q13133 447 aa10.05□□□□□ -0.8
RTFDC1-209ENST00000487211 ZC3H4Q9UPT8 1303 aaKnown RBP10.05□□□□□ -0.8
RTFDC1-209ENST00000487211 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
RTFDC1-209ENST00000487211 FBXO45P0C2W1 286 aa10.04□□□□□ -0.8
RTFDC1-209ENST00000487211 ARMC2Q8NEN0 867 aa10.04□□□□□ -0.8
RTFDC1-209ENST00000487211 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-209ENST00000487211 HCSTQ9UBK5 93 aa10.04□□□□□ -0.8
RTFDC1-209ENST00000487211 S1PR4O95977 384 aa10.03□□□□□ -0.8
RTFDC1-209ENST00000487211 SOX11P35716 441 aa10.03□□□□□ -0.8
RTFDC1-209ENST00000487211 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
RTFDC1-209ENST00000487211 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
RTFDC1-209ENST00000487211 PRG4Q92954 1404 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-209ENST00000487211 ALG2Q9H553 416 aa10.03□□□□□ -0.8
RTFDC1-209ENST00000487211 UNC93B1Q9H1C4 597 aa10.02□□□□□ -0.81
RTFDC1-209ENST00000487211 COL17A1Q9UMD9 1497 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-209ENST00000487211 SRCAPQ6ZRS2 3230 aa10.01□□□□□ -0.81
RTFDC1-209ENST00000487211 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
RTFDC1-209ENST00000487211 PTCRAQ6ISU1 281 aaPredicted RBP10.01□□□□□ -0.81
RTFDC1-209ENST00000487211 SPNS2Q8IVW8 549 aa10.01□□□□□ -0.81
RTFDC1-209ENST00000487211 PCDH10Q9P2E7 1040 aa10.01□□□□□ -0.81
RTFDC1-209ENST00000487211 PPRC1Q5VV67 1664 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-209ENST00000487211 KCNC4Q03721 635 aa10□□□□□ -0.81
RTFDC1-209ENST00000487211 PTK2Q05397 1052 aa10□□□□□ -0.81
RTFDC1-209ENST00000487211 PDXDC2PQ6P474 469 aa10□□□□□ -0.81
RTFDC1-209ENST00000487211 GPKOWQ92917 476 aaPredicted RBP eCLIP10□□□□□ -0.81
RTFDC1-209ENST00000487211 FCF1Q9Y324 198 aaKnown RBP10□□□□□ -0.81
RTFDC1-209ENST00000487211 PCF11O94913 1555 aaKnown RBP10□□□□□ -0.81
RTFDC1-209ENST00000487211 SHROOM2Q13796 1616 aa9.99□□□□□ -0.81
RTFDC1-209ENST00000487211 GPSM3Q9Y4H4 160 aa9.98□□□□□ -0.81
RTFDC1-209ENST00000487211 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
RTFDC1-209ENST00000487211 PPP1R12CQ9BZL4 782 aa9.97□□□□□ -0.81
RTFDC1-209ENST00000487211 LOC105371045A0A1W2PR82 267 aa9.96□□□□□ -0.82
RTFDC1-209ENST00000487211 PPEF1O14829 653 aaPredicted RBP9.96□□□□□ -0.82
RTFDC1-209ENST00000487211 RFX1P22670 979 aa9.96□□□□□ -0.82
RTFDC1-209ENST00000487211 UCN2Q96RP3 112 aa9.96□□□□□ -0.82
RTFDC1-209ENST00000487211 ARHGAP9Q9BRR9 750 aa9.96□□□□□ -0.82
RTFDC1-209ENST00000487211 TTBK1Q5TCY1 1321 aaPredicted RBP9.96□□□□□ -0.82
RTFDC1-209ENST00000487211 MAPKBP1O60336 1514 aa9.96□□□□□ -0.82
RTFDC1-209ENST00000487211 ITGBL1O95965 494 aaPredicted RBP9.95□□□□□ -0.82
RTFDC1-209ENST00000487211 BAP1Q92560 729 aa9.95□□□□□ -0.82
RTFDC1-209ENST00000487211 OCSTAMPQ9BR26 566 aa9.95□□□□□ -0.82
RTFDC1-209ENST00000487211 IQGAP2Q13576 1575 aa9.95□□□□□ -0.82
RTFDC1-209ENST00000487211 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
RTFDC1-209ENST00000487211 KIF21BO75037 1637 aa9.94□□□□□ -0.82
RTFDC1-209ENST00000487211 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
RTFDC1-209ENST00000487211 PALM3A6NDB9 673 aaPredicted RBP9.94□□□□□ -0.82
RTFDC1-209ENST00000487211 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
RTFDC1-209ENST00000487211 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-209ENST00000487211 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
RTFDC1-209ENST00000487211 UGGT2Q9NYU1 1516 aa9.93□□□□□ -0.82
RTFDC1-209ENST00000487211 CARMIL2Q6F5E8 1435 aa9.93□□□□□ -0.82
RTFDC1-209ENST00000487211 AGERQ15109 404 aa9.93□□□□□ -0.82
RTFDC1-209ENST00000487211 CFAP70Q5T0N1 1121 aa9.93□□□□□ -0.82
RTFDC1-209ENST00000487211 SH3BP5LQ7L8J4 393 aa9.93□□□□□ -0.82
RTFDC1-209ENST00000487211 ZBTB33Q86T24 672 aa9.93□□□□□ -0.82
RTFDC1-209ENST00000487211 ADAM32Q8TC27 787 aa9.93□□□□□ -0.82
RTFDC1-209ENST00000487211 GOLGA3Q08378 1498 aa9.92□□□□□ -0.82
RTFDC1-209ENST00000487211 PTPRGP23470 1445 aa9.92□□□□□ -0.82
RTFDC1-209ENST00000487211 TNIKQ9UKE5 1360 aa9.92□□□□□ -0.82
RTFDC1-209ENST00000487211 LMOD1P29536 600 aaPredicted RBP9.92□□□□□ -0.82
RTFDC1-209ENST00000487211 GGCXP38435 758 aa9.92□□□□□ -0.82
RTFDC1-209ENST00000487211 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
RTFDC1-209ENST00000487211 MAGEB6P1A0A0J9YX57 407 aa9.91□□□□□ -0.82
RTFDC1-209ENST00000487211 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-209ENST00000487211 TBC1D9Q6ZT07 1266 aa9.91□□□□□ -0.82
RTFDC1-209ENST00000487211 ZNF511Q8NB15 262 aa9.91□□□□□ -0.82
RTFDC1-209ENST00000487211 ZNF592Q92610 1267 aa9.91□□□□□ -0.82
RTFDC1-209ENST00000487211 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-209ENST00000487211 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
RTFDC1-209ENST00000487211 ZBTB24O43167 697 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-209ENST00000487211 MCCD1P59942 119 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-209ENST00000487211 BPHLQ86WA6 291 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-209ENST00000487211 PBXIP1Q96AQ6 731 aa9.9□□□□□ -0.82
RTFDC1-209ENST00000487211 ACIN1Q9UKV3 1341 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-209ENST00000487211 PIK3CDO00329 1044 aa9.89□□□□□ -0.83
RTFDC1-209ENST00000487211 ATP9BO43861 1147 aa9.89□□□□□ -0.83
RTFDC1-209ENST00000487211 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-209ENST00000487211 FOXJ1Q92949 421 aa9.89□□□□□ -0.83
RTFDC1-209ENST00000487211 CTTNBP2Q8WZ74 1663 aa9.88□□□□□ -0.83
RTFDC1-209ENST00000487211 SH3RF1Q7Z6J0 888 aa9.88□□□□□ -0.83
RTFDC1-209ENST00000487211 ANKLE1Q8NAG6 615 aa9.88□□□□□ -0.83
RTFDC1-209ENST00000487211 CEP126Q9P2H0 1117 aa9.88□□□□□ -0.83
RTFDC1-209ENST00000487211 MAFBQ9Y5Q3 323 aaPredicted RBP9.88□□□□□ -0.83
RTFDC1-209ENST00000487211 PTPRMP28827 1452 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms