RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 ZNF827Q17R98 1081 aa18.44■□□□□ 0.54
ATPAF1-205ENST00000487193 CFAP70Q5T0N1 1121 aa18.44■□□□□ 0.54
ATPAF1-205ENST00000487193 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
ATPAF1-205ENST00000487193 CRB1P82279 1406 aa18.43■□□□□ 0.54
ATPAF1-205ENST00000487193 C14orf93Q9H972 538 aaKnown RBP18.43■□□□□ 0.54
ATPAF1-205ENST00000487193 COL5A2P05997 1499 aaPredicted RBP18.41■□□□□ 0.54
ATPAF1-205ENST00000487193 AKAP12Q02952 1782 aa18.41■□□□□ 0.54
ATPAF1-205ENST00000487193 KIF3CO14782 793 aa18.41■□□□□ 0.54
ATPAF1-205ENST00000487193 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
ATPAF1-205ENST00000487193 SLC4A1APQ9BWU0 796 aaKnown RBP18.41■□□□□ 0.54
ATPAF1-205ENST00000487193 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
ATPAF1-205ENST00000487193 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
ATPAF1-205ENST00000487193 ABTB2Q8N961 1025 aa18.39■□□□□ 0.53
ATPAF1-205ENST00000487193 SLC16A10Q8TF71 515 aa18.39■□□□□ 0.53
ATPAF1-205ENST00000487193 CPDO75976 1380 aa18.39■□□□□ 0.53
ATPAF1-205ENST00000487193 EIF3AQ14152 1382 aaKnown RBP18.39■□□□□ 0.53
ATPAF1-205ENST00000487193 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
ATPAF1-205ENST00000487193 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
ATPAF1-205ENST00000487193 ADCY9O60503 1353 aa18.38■□□□□ 0.53
ATPAF1-205ENST00000487193 AATKQ6ZMQ8 1374 aa18.38■□□□□ 0.53
ATPAF1-205ENST00000487193 TRAK1Q9UPV9 953 aa18.37■□□□□ 0.53
ATPAF1-205ENST00000487193 BCL9O00512 1426 aa18.37■□□□□ 0.53
ATPAF1-205ENST00000487193 GCP02774 474 aa18.36■□□□□ 0.53
ATPAF1-205ENST00000487193 PAPPAQ13219 1627 aa18.35■□□□□ 0.53
ATPAF1-205ENST00000487193 HTRA3P83110 453 aa18.35■□□□□ 0.53
ATPAF1-205ENST00000487193 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
ATPAF1-205ENST00000487193 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
ATPAF1-205ENST00000487193 EXOC5O00471 708 aa18.34■□□□□ 0.53
ATPAF1-205ENST00000487193 NUDT16Q96DE0 195 aaKnown RBP18.34■□□□□ 0.53
ATPAF1-205ENST00000487193 KLRG1Q96E93 195 aa18.33■□□□□ 0.52
ATPAF1-205ENST00000487193 WWC3Q9ULE0 1092 aa18.33■□□□□ 0.52
ATPAF1-205ENST00000487193 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
ATPAF1-205ENST00000487193 PNPLA7Q6ZV29 1317 aa18.32■□□□□ 0.52
ATPAF1-205ENST00000487193 AKT1S1Q96B36 256 aa18.32■□□□□ 0.52
ATPAF1-205ENST00000487193 CDCA7Q9BWT1 371 aaPredicted RBP18.32■□□□□ 0.52
ATPAF1-205ENST00000487193 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
ATPAF1-205ENST00000487193 TFCP2L1Q9NZI6 479 aa18.31■□□□□ 0.52
ATPAF1-205ENST00000487193 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
ATPAF1-205ENST00000487193 USP19O94966 1318 aa18.3■□□□□ 0.52
ATPAF1-205ENST00000487193 ACEP12821 1306 aa18.3■□□□□ 0.52
ATPAF1-205ENST00000487193 TOMM70O94826 608 aa18.3■□□□□ 0.52
ATPAF1-205ENST00000487193 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
ATPAF1-205ENST00000487193 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
ATPAF1-205ENST00000487193 ITSN1Q15811 1721 aa18.29■□□□□ 0.52
ATPAF1-205ENST00000487193 MSH5O43196 834 aa18.28■□□□□ 0.52
ATPAF1-205ENST00000487193 PCDH10Q9P2E7 1040 aa18.28■□□□□ 0.52
ATPAF1-205ENST00000487193 NHSQ6T4R5 1651 aa18.27■□□□□ 0.52
ATPAF1-205ENST00000487193 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
ATPAF1-205ENST00000487193 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
ATPAF1-205ENST00000487193 WDR17Q8IZU2 1322 aa18.25■□□□□ 0.51
ATPAF1-205ENST00000487193 KCNQ4P56696 695 aa18.25■□□□□ 0.51
ATPAF1-205ENST00000487193 QSER1Q2KHR3 1735 aa18.25■□□□□ 0.51
ATPAF1-205ENST00000487193 BTAF1O14981 1849 aa18.25■□□□□ 0.51
ATPAF1-205ENST00000487193 USP6P35125 1406 aa18.24■□□□□ 0.51
ATPAF1-205ENST00000487193 CSB-PGBD3P0DP91 1061 aa18.24■□□□□ 0.51
ATPAF1-205ENST00000487193 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
ATPAF1-205ENST00000487193 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
ATPAF1-205ENST00000487193 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
ATPAF1-205ENST00000487193 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
ATPAF1-205ENST00000487193 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
ATPAF1-205ENST00000487193 ARHGEF28Q8N1W1 1705 aaKnown RBP18.21■□□□□ 0.51
ATPAF1-205ENST00000487193 CARD10Q9BWT7 1032 aa18.21■□□□□ 0.51
ATPAF1-205ENST00000487193 CD2APQ9Y5K6 639 aa18.21■□□□□ 0.51
ATPAF1-205ENST00000487193 PCNTO95613 3336 aa18.2■□□□□ 0.5
ATPAF1-205ENST00000487193 NLRP6P59044 892 aa18.19■□□□□ 0.5
ATPAF1-205ENST00000487193 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
ATPAF1-205ENST00000487193 COL18A1P39060 1754 aa18.18■□□□□ 0.5
ATPAF1-205ENST00000487193 RGPD5Q99666 1765 aa18.18■□□□□ 0.5
ATPAF1-205ENST00000487193 NMRK2Q9NPI5 230 aa18.18■□□□□ 0.5
ATPAF1-205ENST00000487193 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
ATPAF1-205ENST00000487193 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
ATPAF1-205ENST00000487193 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
ATPAF1-205ENST00000487193 COL23A1Q86Y22 540 aaPredicted RBP18.17■□□□□ 0.5
ATPAF1-205ENST00000487193 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
ATPAF1-205ENST00000487193 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
ATPAF1-205ENST00000487193 TNS2Q63HR2 1409 aa18.15■□□□□ 0.5
ATPAF1-205ENST00000487193 C16orf71Q8IYS4 520 aaPredicted RBP18.15■□□□□ 0.5
ATPAF1-205ENST00000487193 RBM46Q8TBY0 533 aaKnown RBP18.15■□□□□ 0.5
ATPAF1-205ENST00000487193 ADGRB1O14514 1584 aa18.15■□□□□ 0.5
ATPAF1-205ENST00000487193 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
ATPAF1-205ENST00000487193 SOX12O15370 315 aa18.12■□□□□ 0.49
ATPAF1-205ENST00000487193 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
ATPAF1-205ENST00000487193 CCDC7Q96M83 1385 aa18.1■□□□□ 0.49
ATPAF1-205ENST00000487193 FSTL1Q12841 308 aa18.09■□□□□ 0.49
ATPAF1-205ENST00000487193 SLIT3O75094 1523 aa18.08■□□□□ 0.49
ATPAF1-205ENST00000487193 ARHGEF25Q86VW2 580 aa18.08■□□□□ 0.48
ATPAF1-205ENST00000487193 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
ATPAF1-205ENST00000487193 MPHOSPH9Q99550 1183 aa18.08■□□□□ 0.48
ATPAF1-205ENST00000487193 KDM2AQ9Y2K7 1162 aa18.08■□□□□ 0.48
ATPAF1-205ENST00000487193 TRPM1Q7Z4N2 1603 aa18.08■□□□□ 0.48
ATPAF1-205ENST00000487193 ABCC6O95255 1503 aa18.08■□□□□ 0.48
ATPAF1-205ENST00000487193 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
ATPAF1-205ENST00000487193 CCNL1Q9UK58 526 aaPredicted RBP18.06■□□□□ 0.48
ATPAF1-205ENST00000487193 IL2RBP14784 551 aa18.05■□□□□ 0.48
ATPAF1-205ENST00000487193 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
ATPAF1-205ENST00000487193 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
ATPAF1-205ENST00000487193 NLRP2Q9NX02 1062 aa18.05■□□□□ 0.48
ATPAF1-205ENST00000487193 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
ATPAF1-205ENST00000487193 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.48
ATPAF1-205ENST00000487193 ARHGAP27Q6ZUM4 889 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms