RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	PIK3C2A	O00443	1686 aa		13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	FAM83G	A6ND36	823 aa		13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	ONECUT3	O60422	494 aa	Predicted RBP	13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	TMF1	P82094	1093 aa		13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	CABLES1	Q8TDN4	633 aa		13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	USP31	Q70CQ4	1352 aa		13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	KTN1	Q86UP2	1357 aa	Known RBP	13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	CD163L1	Q9NR16	1453 aa		13.91	□□□□□ -0.18
KRIT1-223	ENST00000487168	PRDM11	Q9NQV5	511 aa		13.9	□□□□□ -0.18
KRIT1-223	ENST00000487168	TTC21B	Q7Z4L5	1316 aa		13.9	□□□□□ -0.19
KRIT1-223	ENST00000487168	LMO7	Q8WWI1	1683 aa		13.89	□□□□□ -0.19
KRIT1-223	ENST00000487168	GLI3	P10071	1580 aa		13.89	□□□□□ -0.19
KRIT1-223	ENST00000487168	KIAA0232	Q92628	1395 aa		13.89	□□□□□ -0.19
KRIT1-223	ENST00000487168	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.89	□□□□□ -0.19
KRIT1-223	ENST00000487168	KCNH5	Q8NCM2	988 aa		13.89	□□□□□ -0.19
KRIT1-223	ENST00000487168	AATK	Q6ZMQ8	1374 aa		13.88	□□□□□ -0.19
KRIT1-223	ENST00000487168	GC	P02774	474 aa		13.88	□□□□□ -0.19
KRIT1-223	ENST00000487168	ANKRD36B	Q8N2N9	1353 aa		13.87	□□□□□ -0.19
KRIT1-223	ENST00000487168	NLRP6	P59044	892 aa		13.86	□□□□□ -0.19
KRIT1-223	ENST00000487168	BTG4	Q9NY30	223 aa		13.86	□□□□□ -0.19
KRIT1-223	ENST00000487168	NFAT5	O94916	1531 aa		13.85	□□□□□ -0.19
KRIT1-223	ENST00000487168		A0A1W2PP64	1363 aa		13.85	□□□□□ -0.19
KRIT1-223	ENST00000487168	SPATA31A5	Q5VU36	1347 aa		13.85	□□□□□ -0.19
KRIT1-223	ENST00000487168	SPATA31A7	Q8IWB4	1347 aa		13.85	□□□□□ -0.19
KRIT1-223	ENST00000487168	CCDC125	Q86Z20	511 aa		13.84	□□□□□ -0.19
KRIT1-223	ENST00000487168	CLEC11A	Q9Y240	323 aa		13.84	□□□□□ -0.19
KRIT1-223	ENST00000487168	OVOS2	A0A0J9YW53	1432 aa		13.83	□□□□□ -0.2
KRIT1-223	ENST00000487168	OVOS2	Q6IE36	1432 aa		13.83	□□□□□ -0.2
KRIT1-223	ENST00000487168	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
KRIT1-223	ENST00000487168	TMC1	Q8TDI8	760 aa		13.83	□□□□□ -0.2
KRIT1-223	ENST00000487168	SLC12A5	Q9H2X9	1139 aa		13.83	□□□□□ -0.2
KRIT1-223	ENST00000487168	THRAP3	Q9Y2W1	955 aa	Known RBP	13.83	□□□□□ -0.2
KRIT1-223	ENST00000487168	THSD7A	Q9UPZ6	1657 aa		13.82	□□□□□ -0.2
KRIT1-223	ENST00000487168	CAMTA1	Q9Y6Y1	1673 aa		13.82	□□□□□ -0.2
KRIT1-223	ENST00000487168	COL5A2	P05997	1499 aa	Predicted RBP	13.82	□□□□□ -0.2
KRIT1-223	ENST00000487168	ARHGEF25	Q86VW2	580 aa		13.82	□□□□□ -0.2
KRIT1-223	ENST00000487168	SPOCK2	Q92563	424 aa		13.82	□□□□□ -0.2
KRIT1-223	ENST00000487168	SPATA31A1	Q5TZJ5	1347 aa		13.82	□□□□□ -0.2
KRIT1-223	ENST00000487168	COL18A1	P39060	1754 aa		13.81	□□□□□ -0.2
KRIT1-223	ENST00000487168	BARGIN	Q6ZT62	677 aa		13.81	□□□□□ -0.2
KRIT1-223	ENST00000487168	C11orf95	C9JLR9	678 aa	Predicted RBP	13.8	□□□□□ -0.2
KRIT1-223	ENST00000487168	ZC3H6	P61129	1189 aa	Known RBP	13.8	□□□□□ -0.2
KRIT1-223	ENST00000487168	VSIG10	Q8N0Z9	540 aa		13.8	□□□□□ -0.2
KRIT1-223	ENST00000487168	KLHL34	Q8N239	644 aa		13.8	□□□□□ -0.2
KRIT1-223	ENST00000487168	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
KRIT1-223	ENST00000487168	CRB1	P82279	1406 aa		13.8	□□□□□ -0.2
KRIT1-223	ENST00000487168	NUTM2G	Q5VZR2	741 aa		13.79	□□□□□ -0.2
KRIT1-223	ENST00000487168	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.79	□□□□□ -0.2
KRIT1-223	ENST00000487168	MYOM1	P52179	1685 aa		13.79	□□□□□ -0.2
KRIT1-223	ENST00000487168	SEPT12	Q8IYM1	358 aa		13.78	□□□□□ -0.2
KRIT1-223	ENST00000487168	KIF24	Q5T7B8	1368 aa		13.78	□□□□□ -0.2
KRIT1-223	ENST00000487168	BLM	P54132	1417 aa	Predicted RBP	13.78	□□□□□ -0.2
KRIT1-223	ENST00000487168	EVA1C	P58658	441 aa		13.77	□□□□□ -0.21
KRIT1-223	ENST00000487168	CHRNA2	Q15822	529 aa		13.77	□□□□□ -0.21
KRIT1-223	ENST00000487168	WDR17	Q8IZU2	1322 aa		13.77	□□□□□ -0.21
KRIT1-223	ENST00000487168	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.77	□□□□□ -0.21
KRIT1-223	ENST00000487168	CCDC9	Q9Y3X0	531 aa	Known RBP	13.77	□□□□□ -0.21
KRIT1-223	ENST00000487168	RTL1	A6NKG5	1358 aa		13.76	□□□□□ -0.21
KRIT1-223	ENST00000487168	TCP11L2	Q8N4U5	519 aa		13.76	□□□□□ -0.21
KRIT1-223	ENST00000487168	BRWD3	Q6RI45	1802 aa		13.76	□□□□□ -0.21
KRIT1-223	ENST00000487168	PARP4	Q9UKK3	1724 aa	Known RBP	13.76	□□□□□ -0.21
KRIT1-223	ENST00000487168	KRT27	Q7Z3Y8	459 aa		13.75	□□□□□ -0.21
KRIT1-223	ENST00000487168	NME9	Q86XW9	330 aa		13.75	□□□□□ -0.21
KRIT1-223	ENST00000487168	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
KRIT1-223	ENST00000487168	COG3	Q96JB2	828 aa		13.75	□□□□□ -0.21
KRIT1-223	ENST00000487168	FAM208A	Q9UK61	1670 aa	Known RBP	13.75	□□□□□ -0.21
KRIT1-223	ENST00000487168	CCDC7	Q96M83	1385 aa		13.74	□□□□□ -0.21
KRIT1-223	ENST00000487168	PLEKHG5	O94827	1062 aa		13.74	□□□□□ -0.21
KRIT1-223	ENST00000487168	PRKAR2A	P13861	404 aa	Known RBP	13.74	□□□□□ -0.21
KRIT1-223	ENST00000487168	FAM98C	Q17RN3	349 aa	Known RBP	13.74	□□□□□ -0.21
KRIT1-223	ENST00000487168	SSUH2	Q9Y2M2	353 aa		13.74	□□□□□ -0.21
KRIT1-223	ENST00000487168	LTN1	O94822	1766 aa		13.73	□□□□□ -0.21
KRIT1-223	ENST00000487168	BBX	Q8WY36	941 aa	Predicted RBP	13.73	□□□□□ -0.21
KRIT1-223	ENST00000487168	CARD10	Q9BWT7	1032 aa		13.73	□□□□□ -0.21
KRIT1-223	ENST00000487168	STRN4	Q9NRL3	753 aa		13.73	□□□□□ -0.21
KRIT1-223	ENST00000487168	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.73	□□□□□ -0.21
KRIT1-223	ENST00000487168	KIF20B	Q96Q89	1820 aa		13.73	□□□□□ -0.21
KRIT1-223	ENST00000487168	BCL9	O00512	1426 aa		13.73	□□□□□ -0.21
KRIT1-223	ENST00000487168	NSD2	O96028	1365 aa		13.72	□□□□□ -0.21
KRIT1-223	ENST00000487168	ERBB3	P21860	1342 aa		13.72	□□□□□ -0.21
KRIT1-223	ENST00000487168	HSPA5	P11021	654 aa	Known RBP	13.72	□□□□□ -0.21
KRIT1-223	ENST00000487168	LARP1	Q6PKG0	1096 aa	Known RBP	13.72	□□□□□ -0.21
KRIT1-223	ENST00000487168	DISP2	A7MBM2	1401 aa		13.72	□□□□□ -0.21
KRIT1-223	ENST00000487168	CGNL1	Q0VF96	1302 aa		13.71	□□□□□ -0.21
KRIT1-223	ENST00000487168	FYB1	O15117	783 aa		13.71	□□□□□ -0.21
KRIT1-223	ENST00000487168	ECM2	O94769	699 aa	Predicted RBP	13.71	□□□□□ -0.21
KRIT1-223	ENST00000487168	WNK3	Q9BYP7	1800 aa		13.71	□□□□□ -0.22
KRIT1-223	ENST00000487168	IP6K1	Q92551	441 aa		13.7	□□□□□ -0.22
KRIT1-223	ENST00000487168	AXIN2	Q9Y2T1	843 aa		13.7	□□□□□ -0.22
KRIT1-223	ENST00000487168	NSD3	Q9BZ95	1437 aa		13.7	□□□□□ -0.22
KRIT1-223	ENST00000487168	RGPD1	P0DJD0	1748 aa		13.7	□□□□□ -0.22
KRIT1-223	ENST00000487168	FAM196A	Q6ZSG2	479 aa		13.69	□□□□□ -0.22
KRIT1-223	ENST00000487168	PARD3	Q8TEW0	1356 aa		13.69	□□□□□ -0.22
KRIT1-223	ENST00000487168	ANKRD26	Q9UPS8	1709 aa		13.68	□□□□□ -0.22
KRIT1-223	ENST00000487168	TOM1L2	Q6ZVM7	507 aa		13.68	□□□□□ -0.22
KRIT1-223	ENST00000487168	SRCAP	Q6ZRS2	3230 aa		13.68	□□□□□ -0.22
KRIT1-223	ENST00000487168	PLEKHG2	Q9H7P9	1386 aa		13.68	□□□□□ -0.22
KRIT1-223	ENST00000487168		A0A0G2JS52	829 aa		13.67	□□□□□ -0.22
KRIT1-223	ENST00000487168	MYT1	Q01538	1121 aa		13.67	□□□□□ -0.22
KRIT1-223	ENST00000487168	CARD14	Q9BXL6	1004 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms