RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 NCOA4Q13772 614 aa9□□□□□ -0.97
PRPF38A-203ENST00000487160 PLA2G2CQ5R387 149 aa9□□□□□ -0.97
PRPF38A-203ENST00000487160 KCTD17Q8N5Z5 321 aa9□□□□□ -0.97
PRPF38A-203ENST00000487160 CHIC2Q9UKJ5 165 aa9□□□□□ -0.97
PRPF38A-203ENST00000487160 USTQ9Y2C2 406 aa9□□□□□ -0.97
PRPF38A-203ENST00000487160 GIGYF1O75420 1035 aaPredicted RBP8.99□□□□□ -0.97
PRPF38A-203ENST00000487160 GGCXP38435 758 aa8.99□□□□□ -0.97
PRPF38A-203ENST00000487160 ANKLE1Q8NAG6 615 aa8.99□□□□□ -0.97
PRPF38A-203ENST00000487160 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
PRPF38A-203ENST00000487160 TRIM32Q13049 653 aa8.98□□□□□ -0.97
PRPF38A-203ENST00000487160 PCDH10Q9P2E7 1040 aa8.98□□□□□ -0.97
PRPF38A-203ENST00000487160 LZTS3O60299 673 aaPredicted RBP8.97□□□□□ -0.97
PRPF38A-203ENST00000487160 MAP7D1Q3KQU3 841 aa8.97□□□□□ -0.97
PRPF38A-203ENST00000487160 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
PRPF38A-203ENST00000487160 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
PRPF38A-203ENST00000487160 SLC10A4Q96EP9 437 aa8.97□□□□□ -0.97
PRPF38A-203ENST00000487160 CCDC85AQ96PX6 553 aaPredicted RBP8.97□□□□□ -0.97
PRPF38A-203ENST00000487160 C1QTNF2Q9BXJ5 285 aa8.97□□□□□ -0.97
PRPF38A-203ENST00000487160 TMEM88BA6NKF7 163 aa8.96□□□□□ -0.98
PRPF38A-203ENST00000487160 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
PRPF38A-203ENST00000487160 SKOR1P84550 965 aa8.95□□□□□ -0.98
PRPF38A-203ENST00000487160 ELOAQ14241 798 aaKnown RBP8.95□□□□□ -0.98
PRPF38A-203ENST00000487160 EML3Q32P44 896 aa8.95□□□□□ -0.98
PRPF38A-203ENST00000487160 CRTC2Q53ET0 693 aaPredicted RBP8.95□□□□□ -0.98
PRPF38A-203ENST00000487160 ZMIZ1Q9ULJ6 1067 aa8.95□□□□□ -0.98
PRPF38A-203ENST00000487160 NOVA2Q9UNW9 492 aaKnown RBP8.95□□□□□ -0.98
PRPF38A-203ENST00000487160 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
PRPF38A-203ENST00000487160 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
PRPF38A-203ENST00000487160 RASA1P20936 1047 aa8.94□□□□□ -0.98
PRPF38A-203ENST00000487160 LARP1Q6PKG0 1096 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-203ENST00000487160 TRMT44Q8IYL2 757 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-203ENST00000487160 DOLKQ9UPQ8 538 aa8.94□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L10C9JJH3 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L12C9JPN9 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L21D6R901 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 PTK7Q13308 1070 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 NBPF20Q3BBV1 942 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 RNF20Q5VTR2 975 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
PRPF38A-203ENST00000487160 ESPNB1AK53 854 aa8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 VARSP26640 1264 aaKnown RBP8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 RPIAP49247 311 aa8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 WNT7BP56706 349 aa8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 OXLD1Q5BKU9 147 aa8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 TMEM164Q5U3C3 297 aa8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 CDCA7Q9BWT1 371 aaPredicted RBP8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 CDV3Q9UKY7 258 aaKnown RBP8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 NOD1Q9Y239 953 aa8.92□□□□□ -0.98
PRPF38A-203ENST00000487160 BRD1O95696 1058 aa8.91□□□□□ -0.98
PRPF38A-203ENST00000487160 CLDN10P78369 228 aa8.91□□□□□ -0.98
PRPF38A-203ENST00000487160 CD2BP2O95400 341 aaKnown RBP8.9□□□□□ -0.98
PRPF38A-203ENST00000487160 RAB15P59190 212 aa8.9□□□□□ -0.98
PRPF38A-203ENST00000487160 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
PRPF38A-203ENST00000487160 KCTD15Q96SI1 283 aaPredicted RBP8.9□□□□□ -0.98
PRPF38A-203ENST00000487160 PCDHB11Q9Y5F2 797 aa8.9□□□□□ -0.98
PRPF38A-203ENST00000487160 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 RC3H1Q5TC82 1133 aaKnown RBP8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 TRIM50Q86XT4 487 aa8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 ANKMY2Q8IV38 441 aa8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 SEPT12Q8IYM1 358 aa8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 EHBP1Q8NDI1 1231 aa8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 ZNF594Q96JF6 807 aaPredicted RBP8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 DNAAF2Q9NVR5 837 aaKnown RBP8.89□□□□□ -0.99
PRPF38A-203ENST00000487160 ATP1A2P50993 1020 aa8.88□□□□□ -0.99
PRPF38A-203ENST00000487160 DPYDQ12882 1025 aa8.88□□□□□ -0.99
PRPF38A-203ENST00000487160 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
PRPF38A-203ENST00000487160 EMID1Q96A84 441 aaPredicted RBP8.88□□□□□ -0.99
PRPF38A-203ENST00000487160 GTF2IP78347 998 aa8.87□□□□□ -0.99
PRPF38A-203ENST00000487160 USP4Q13107 963 aa8.87□□□□□ -0.99
PRPF38A-203ENST00000487160 ARID5BQ14865 1188 aa8.87□□□□□ -0.99
PRPF38A-203ENST00000487160 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
PRPF38A-203ENST00000487160 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
PRPF38A-203ENST00000487160 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
PRPF38A-203ENST00000487160 MAP4K5Q9Y4K4 846 aa8.87□□□□□ -0.99
PRPF38A-203ENST00000487160 KCNA1Q09470 495 aa8.86□□□□□ -0.99
PRPF38A-203ENST00000487160 FAM69CQ0P6D2 419 aa8.86□□□□□ -0.99
PRPF38A-203ENST00000487160 MMRN1Q13201 1228 aa8.86□□□□□ -0.99
PRPF38A-203ENST00000487160 CCDC125Q86Z20 511 aa8.86□□□□□ -0.99
PRPF38A-203ENST00000487160 LARGE2Q8N3Y3 721 aa8.86□□□□□ -0.99
PRPF38A-203ENST00000487160 SIRT1Q96EB6 747 aa8.86□□□□□ -0.99
PRPF38A-203ENST00000487160 PCDHGA11Q9Y5H2 935 aa8.86□□□□□ -0.99
PRPF38A-203ENST00000487160 ERVH48-1M5A8F1 160 aa8.85□□□□□ -0.99
PRPF38A-203ENST00000487160 DKK1O94907 266 aa8.85□□□□□ -0.99
PRPF38A-203ENST00000487160 PATL2C9JE40 543 aaKnown RBP8.84□□□□□ -0.99
PRPF38A-203ENST00000487160 CDK15Q96Q40 435 aa8.84□□□□□ -0.99
PRPF38A-203ENST00000487160 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
PRPF38A-203ENST00000487160 SIAH2O43255 324 aa8.83□□□□□ -1
PRPF38A-203ENST00000487160 SLC19A1P41440 591 aa8.83□□□□□ -1
PRPF38A-203ENST00000487160 GRM5P41594 1212 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms