RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CCDC116Q8IYX3 515 aa8.63□□□□□ -1.03
SNRNP27-204ENST00000487029 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
SNRNP27-204ENST00000487029 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
SNRNP27-204ENST00000487029 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
SNRNP27-204ENST00000487029 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
SNRNP27-204ENST00000487029 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
SNRNP27-204ENST00000487029 CCDC155Q8N6L0 562 aa8.62□□□□□ -1.03
SNRNP27-204ENST00000487029 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
SNRNP27-204ENST00000487029 CARD14Q9BXL6 1004 aa8.62□□□□□ -1.03
SNRNP27-204ENST00000487029 ERFEQ4G0M1 354 aa8.61□□□□□ -1.03
SNRNP27-204ENST00000487029 PPP1R26Q5T8A7 1209 aaPredicted RBP8.61□□□□□ -1.03
SNRNP27-204ENST00000487029 ARMC2Q8NEN0 867 aa8.61□□□□□ -1.03
SNRNP27-204ENST00000487029 SPINT1O43278 529 aa8.6□□□□□ -1.03
SNRNP27-204ENST00000487029 NBPF14Q5TI25 921 aa8.6□□□□□ -1.03
SNRNP27-204ENST00000487029 Q6ZVU0 165 aa8.6□□□□□ -1.03
SNRNP27-204ENST00000487029 SLC35F4A4IF30 521 aa8.59□□□□□ -1.03
SNRNP27-204ENST00000487029 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
SNRNP27-204ENST00000487029 VWA5B2Q8N398 1253 aa8.58□□□□□ -1.04
SNRNP27-204ENST00000487029 AGBL1Q96MI9 1066 aa8.58□□□□□ -1.04
SNRNP27-204ENST00000487029 CTSOP43234 321 aaPredicted RBP8.57□□□□□ -1.04
SNRNP27-204ENST00000487029 ARHGEF15O94989 841 aa8.56□□□□□ -1.04
SNRNP27-204ENST00000487029 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
SNRNP27-204ENST00000487029 ITGA6P23229 1130 aa8.56□□□□□ -1.04
SNRNP27-204ENST00000487029 SVOPQ8N4V2 548 aa8.56□□□□□ -1.04
SNRNP27-204ENST00000487029 CTDSPL2Q05D32 466 aa8.55□□□□□ -1.04
SNRNP27-204ENST00000487029 AK7Q96M32 723 aa8.55□□□□□ -1.04
SNRNP27-204ENST00000487029 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
SNRNP27-204ENST00000487029 IRS1P35568 1242 aa8.54□□□□□ -1.04
SNRNP27-204ENST00000487029 HELBQ8NG08 1087 aaPredicted RBP8.54□□□□□ -1.04
SNRNP27-204ENST00000487029 KCTD15Q96SI1 283 aaPredicted RBP8.54□□□□□ -1.04
SNRNP27-204ENST00000487029 INSM2Q96T92 566 aaPredicted RBP8.54□□□□□ -1.04
SNRNP27-204ENST00000487029 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
SNRNP27-204ENST00000487029 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
SNRNP27-204ENST00000487029 CDC14CA4D256 554 aa8.53□□□□□ -1.04
SNRNP27-204ENST00000487029 RELBQ01201 579 aa8.53□□□□□ -1.04
SNRNP27-204ENST00000487029 OCSTAMPQ9BR26 566 aa8.53□□□□□ -1.04
SNRNP27-204ENST00000487029 PDE4DQ08499 809 aa8.52□□□□□ -1.05
SNRNP27-204ENST00000487029 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
SNRNP27-204ENST00000487029 GPAT2Q6NUI2 795 aa8.52□□□□□ -1.05
SNRNP27-204ENST00000487029 LRRN4Q8WUT4 740 aa8.52□□□□□ -1.05
SNRNP27-204ENST00000487029 GPKOWQ92917 476 aaPredicted RBP eCLIP8.52□□□□□ -1.05
SNRNP27-204ENST00000487029 ARHGAP9Q9BRR9 750 aa8.52□□□□□ -1.05
SNRNP27-204ENST00000487029 CLK2P49760 499 aaKnown RBP8.51□□□□□ -1.05
SNRNP27-204ENST00000487029 PDXDC2PQ6P474 469 aa8.51□□□□□ -1.05
SNRNP27-204ENST00000487029 SV2AQ7L0J3 742 aa8.51□□□□□ -1.05
SNRNP27-204ENST00000487029 RNF217Q8TC41 542 aa8.51□□□□□ -1.05
SNRNP27-204ENST00000487029 ZNF395Q9H8N7 513 aaPredicted RBP8.51□□□□□ -1.05
SNRNP27-204ENST00000487029 POLR3EQ9NVU0 708 aa8.51□□□□□ -1.05
SNRNP27-204ENST00000487029 INTS6LQ5JSJ4 861 aaKnown RBP8.5□□□□□ -1.05
SNRNP27-204ENST00000487029 TMPRSS4Q9NRS4 437 aa8.5□□□□□ -1.05
SNRNP27-204ENST00000487029 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
SNRNP27-204ENST00000487029 SLC10A4Q96EP9 437 aa8.49□□□□□ -1.05
SNRNP27-204ENST00000487029 CUEDC1Q9NWM3 386 aaPredicted RBP8.49□□□□□ -1.05
SNRNP27-204ENST00000487029 FKBPLQ9UIM3 349 aa8.49□□□□□ -1.05
SNRNP27-204ENST00000487029 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
SNRNP27-204ENST00000487029 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
SNRNP27-204ENST00000487029 KDF1Q8NAX2 398 aaPredicted RBP8.48□□□□□ -1.05
SNRNP27-204ENST00000487029 POLMQ9NP87 494 aaPredicted RBP8.48□□□□□ -1.05
SNRNP27-204ENST00000487029 GAS6Q14393 721 aa8.47□□□□□ -1.05
SNRNP27-204ENST00000487029 NR6A1Q15406 480 aa8.47□□□□□ -1.05
SNRNP27-204ENST00000487029 FOXD4L5Q5VV16 416 aaPredicted RBP8.47□□□□□ -1.05
SNRNP27-204ENST00000487029 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
SNRNP27-204ENST00000487029 MARSP56192 900 aaKnown RBP8.46□□□□□ -1.06
SNRNP27-204ENST00000487029 DHX9Q08211 1270 aaKnown RBP8.46□□□□□ -1.06
SNRNP27-204ENST00000487029 ZBTB33Q86T24 672 aa8.46□□□□□ -1.06
SNRNP27-204ENST00000487029 ZNF784Q8NCA9 323 aaPredicted RBP8.45□□□□□ -1.06
SNRNP27-204ENST00000487029 LILRA1O75019 489 aa8.44□□□□□ -1.06
SNRNP27-204ENST00000487029 CDV3Q9UKY7 258 aaKnown RBP8.44□□□□□ -1.06
SNRNP27-204ENST00000487029 CELA2BP08218 269 aaPredicted RBP8.43□□□□□ -1.06
SNRNP27-204ENST00000487029 RAB15P59190 212 aa8.43□□□□□ -1.06
SNRNP27-204ENST00000487029 SRSF11Q05519 484 aaKnown RBP8.43□□□□□ -1.06
SNRNP27-204ENST00000487029 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
SNRNP27-204ENST00000487029 ADAM32Q8TC27 787 aa8.43□□□□□ -1.06
SNRNP27-204ENST00000487029 EPS8L1Q8TE68 723 aa8.43□□□□□ -1.06
SNRNP27-204ENST00000487029 SLC24A3Q9HC58 644 aa8.43□□□□□ -1.06
SNRNP27-204ENST00000487029 IGHA1P01876 353 aa8.42□□□□□ -1.06
SNRNP27-204ENST00000487029 ERVH48-1M5A8F1 160 aa8.41□□□□□ -1.06
SNRNP27-204ENST00000487029 ADH1AP07327 375 aa8.41□□□□□ -1.06
SNRNP27-204ENST00000487029 SCARF2Q96GP6 870 aaPredicted RBP8.41□□□□□ -1.06
SNRNP27-204ENST00000487029 ITGB2P05107 769 aa8.4□□□□□ -1.06
SNRNP27-204ENST00000487029 PTGIRP43119 386 aa8.4□□□□□ -1.06
SNRNP27-204ENST00000487029 PROCA1Q8NCQ7 364 aaPredicted RBP8.4□□□□□ -1.06
SNRNP27-204ENST00000487029 RSPH6AQ9H0K4 717 aa8.4□□□□□ -1.06
SNRNP27-204ENST00000487029 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
SNRNP27-204ENST00000487029 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
SNRNP27-204ENST00000487029 RHOQP17081 205 aa8.39□□□□□ -1.07
SNRNP27-204ENST00000487029 PTK2Q05397 1052 aa8.39□□□□□ -1.07
SNRNP27-204ENST00000487029 GPR25O00155 361 aa8.38□□□□□ -1.07
SNRNP27-204ENST00000487029 FOXK2Q01167 660 aa8.38□□□□□ -1.07
SNRNP27-204ENST00000487029 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
SNRNP27-204ENST00000487029 PRICKLE2Q7Z3G6 844 aa8.38□□□□□ -1.07
SNRNP27-204ENST00000487029 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
SNRNP27-204ENST00000487029 ZNF837Q96EG3 531 aaPredicted RBP8.37□□□□□ -1.07
SNRNP27-204ENST00000487029 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
SNRNP27-204ENST00000487029 GPSM3Q9Y4H4 160 aa8.37□□□□□ -1.07
SNRNP27-204ENST00000487029 NBPF20Q3BBV1 942 aa8.36□□□□□ -1.07
SNRNP27-204ENST00000487029 PLA2G4EQ3MJ16 856 aa8.36□□□□□ -1.07
SNRNP27-204ENST00000487029 ESPNB1AK53 854 aa8.35□□□□□ -1.07
SNRNP27-204ENST00000487029 DBN1Q16643 649 aa8.35□□□□□ -1.07
SNRNP27-204ENST00000487029 XP32Q5T750 250 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms