RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
SF1-216ENST00000486867 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
SF1-216ENST00000486867 COG3Q96JB2 828 aa18.21■□□□□ 0.51
SF1-216ENST00000486867 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
SF1-216ENST00000486867 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
SF1-216ENST00000486867 SPATA31A1Q5TZJ5 1347 aa18.2■□□□□ 0.5
SF1-216ENST00000486867 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
SF1-216ENST00000486867 PEAK1Q9H792 1746 aa18.19■□□□□ 0.5
SF1-216ENST00000486867 PANK3Q9H999 370 aa18.19■□□□□ 0.5
SF1-216ENST00000486867 AXIN2Q9Y2T1 843 aa18.19■□□□□ 0.5
SF1-216ENST00000486867 BLMP54132 1417 aaPredicted RBP18.18■□□□□ 0.5
SF1-216ENST00000486867 CRB1P82279 1406 aa18.18■□□□□ 0.5
SF1-216ENST00000486867 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
SF1-216ENST00000486867 NSD2O96028 1365 aa18.17■□□□□ 0.5
SF1-216ENST00000486867 POLR3GLQ9BT43 218 aa18.17■□□□□ 0.5
SF1-216ENST00000486867 RGPD2P0DJD1 1756 aa18.17■□□□□ 0.5
SF1-216ENST00000486867 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
SF1-216ENST00000486867 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
SF1-216ENST00000486867 LARP1Q6PKG0 1096 aaKnown RBP18.16■□□□□ 0.5
SF1-216ENST00000486867 WDR17Q8IZU2 1322 aa18.16■□□□□ 0.5
SF1-216ENST00000486867 EP400Q96L91 3159 aa18.15■□□□□ 0.5
SF1-216ENST00000486867 BARGINQ6ZT62 677 aa18.15■□□□□ 0.5
SF1-216ENST00000486867 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
SF1-216ENST00000486867 SOX12O15370 315 aa18.14■□□□□ 0.49
SF1-216ENST00000486867 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
SF1-216ENST00000486867 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
SF1-216ENST00000486867 IP6K1Q92551 441 aa18.14■□□□□ 0.49
SF1-216ENST00000486867 STRN4Q9NRL3 753 aa18.14■□□□□ 0.49
SF1-216ENST00000486867 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
SF1-216ENST00000486867 ERBB3P21860 1342 aa18.14■□□□□ 0.49
SF1-216ENST00000486867 EVA1CP58658 441 aa18.13■□□□□ 0.49
SF1-216ENST00000486867 LRRC37A3O60309 1634 aa18.12■□□□□ 0.49
SF1-216ENST00000486867 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
SF1-216ENST00000486867 NPC1L1Q9UHC9 1359 aa18.12■□□□□ 0.49
SF1-216ENST00000486867 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
SF1-216ENST00000486867 SEPT12Q8IYM1 358 aa18.11■□□□□ 0.49
SF1-216ENST00000486867 TCP11L2Q8N4U5 519 aa18.11■□□□□ 0.49
SF1-216ENST00000486867 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
SF1-216ENST00000486867 SMG6Q86US8 1419 aaKnown RBP18.1■□□□□ 0.49
SF1-216ENST00000486867 ZBTB7CA1YPR0 619 aa18.1■□□□□ 0.49
SF1-216ENST00000486867 HOXC9P31274 260 aa18.1■□□□□ 0.49
SF1-216ENST00000486867 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
SF1-216ENST00000486867 CARD10Q9BWT7 1032 aa18.1■□□□□ 0.49
SF1-216ENST00000486867 FBLN1P23142 703 aa18.09■□□□□ 0.49
SF1-216ENST00000486867 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
SF1-216ENST00000486867 INSRP06213 1382 aa18.08■□□□□ 0.49
SF1-216ENST00000486867 FLT4P35916 1363 aa18.08■□□□□ 0.49
SF1-216ENST00000486867 SBF2Q86WG5 1849 aa18.08■□□□□ 0.48
SF1-216ENST00000486867 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
SF1-216ENST00000486867 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
SF1-216ENST00000486867 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
SF1-216ENST00000486867 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
SF1-216ENST00000486867 AMPHP49418 695 aa18.05■□□□□ 0.48
SF1-216ENST00000486867 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
SF1-216ENST00000486867 KRT27Q7Z3Y8 459 aa18.04■□□□□ 0.48
SF1-216ENST00000486867 UPF1Q92900 1129 aaKnown RBP eCLIP18.04■□□□□ 0.48
SF1-216ENST00000486867 CDCA7Q9BWT1 371 aaPredicted RBP18.04■□□□□ 0.48
SF1-216ENST00000486867 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
SF1-216ENST00000486867 RGPD1P0DJD0 1748 aa18.03■□□□□ 0.48
SF1-216ENST00000486867 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
SF1-216ENST00000486867 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
SF1-216ENST00000486867 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
SF1-216ENST00000486867 CSB-PGBD3P0DP91 1061 aa18.02■□□□□ 0.48
SF1-216ENST00000486867 BCL9O00512 1426 aa18■□□□□ 0.47
SF1-216ENST00000486867 TNS2Q63HR2 1409 aa18■□□□□ 0.47
SF1-216ENST00000486867 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
SF1-216ENST00000486867 PKD1L3Q7Z443 1732 aa17.99■□□□□ 0.47
SF1-216ENST00000486867 MORC1Q86VD1 984 aa17.99■□□□□ 0.47
SF1-216ENST00000486867 NLRP2Q9NX02 1062 aa17.99■□□□□ 0.47
SF1-216ENST00000486867 CCDC125Q86Z20 511 aa17.98■□□□□ 0.47
SF1-216ENST00000486867 A0A0G2JS52 829 aa17.97■□□□□ 0.47
SF1-216ENST00000486867 MYT1Q01538 1121 aa17.97■□□□□ 0.47
SF1-216ENST00000486867 NBPF6Q5VWK0 638 aa17.96■□□□□ 0.47
SF1-216ENST00000486867 NBPF4Q96M43 638 aa17.96■□□□□ 0.47
SF1-216ENST00000486867 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
SF1-216ENST00000486867 RGPD3A6NKT7 1758 aaPredicted RBP17.95■□□□□ 0.46
SF1-216ENST00000486867 RGPD4Q7Z3J3 1758 aa17.95■□□□□ 0.46
SF1-216ENST00000486867 MEGF6O75095 1541 aa17.95■□□□□ 0.46
SF1-216ENST00000486867 IL2RBP14784 551 aa17.95■□□□□ 0.46
SF1-216ENST00000486867 DDB1Q16531 1140 aa17.95■□□□□ 0.46
SF1-216ENST00000486867 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
SF1-216ENST00000486867 OVOS2A0A0G2JMS6 1433 aa17.95■□□□□ 0.46
SF1-216ENST00000486867 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
SF1-216ENST00000486867 FAM196AQ6ZSG2 479 aa17.94■□□□□ 0.46
SF1-216ENST00000486867 PDE3BQ13370 1112 aa17.93■□□□□ 0.46
SF1-216ENST00000486867 NHSQ6T4R5 1651 aa17.93■□□□□ 0.46
SF1-216ENST00000486867 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
SF1-216ENST00000486867 COL3A1P02461 1466 aaPredicted RBP17.92■□□□□ 0.46
SF1-216ENST00000486867 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
SF1-216ENST00000486867 PPM1GO15355 546 aaPredicted RBP17.91■□□□□ 0.46
SF1-216ENST00000486867 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
SF1-216ENST00000486867 MARCH10Q8NA82 808 aaPredicted RBP17.91■□□□□ 0.46
SF1-216ENST00000486867 EXOC5O00471 708 aa17.9■□□□□ 0.46
SF1-216ENST00000486867 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
SF1-216ENST00000486867 EYA1Q99502 592 aa17.9■□□□□ 0.46
SF1-216ENST00000486867 IGSF1Q8N6C5 1336 aa17.9■□□□□ 0.46
SF1-216ENST00000486867 RREB1Q92766 1687 aa17.89■□□□□ 0.45
SF1-216ENST00000486867 MTHFSP49914 203 aa17.88■□□□□ 0.45
SF1-216ENST00000486867 PARD3Q8TEW0 1356 aa17.88■□□□□ 0.45
SF1-216ENST00000486867 DOT1LQ8TEK3 1739 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms