RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 UHRF1BP1LA0JNW5 1464 aa8.96□□□□□ -0.98
USP41-204ENST00000486536 EHBP1L1Q8N3D4 1523 aa8.95□□□□□ -0.98
USP41-204ENST00000486536 ERCC6L2Q5T890 1561 aa8.95□□□□□ -0.98
USP41-204ENST00000486536 LYPD8Q6UX82 237 aa8.95□□□□□ -0.98
USP41-204ENST00000486536 SLC27A5Q9Y2P5 690 aa8.95□□□□□ -0.98
USP41-204ENST00000486536 PUS10Q3MIT2 529 aaKnown RBP8.94□□□□□ -0.98
USP41-204ENST00000486536 VARS2Q5ST30 1063 aaKnown RBP8.94□□□□□ -0.98
USP41-204ENST00000486536 RRBP1Q9P2E9 1410 aaKnown RBP8.94□□□□□ -0.98
USP41-204ENST00000486536 ABCC2Q92887 1545 aa8.94□□□□□ -0.98
USP41-204ENST00000486536 ACTN4O43707 911 aaKnown RBP8.93□□□□□ -0.98
USP41-204ENST00000486536 ATP9BO43861 1147 aa8.93□□□□□ -0.98
USP41-204ENST00000486536 NR1H3Q13133 447 aa8.93□□□□□ -0.98
USP41-204ENST00000486536 FOXD4L5Q5VV16 416 aaPredicted RBP8.93□□□□□ -0.98
USP41-204ENST00000486536 FOXD4L4Q8WXT5 416 aaPredicted RBP8.93□□□□□ -0.98
USP41-204ENST00000486536 ATP10BO94823 1461 aa8.93□□□□□ -0.98
USP41-204ENST00000486536 CDK13Q14004 1512 aaKnown RBP8.93□□□□□ -0.98
USP41-204ENST00000486536 KIF13AQ9H1H9 1805 aa8.92□□□□□ -0.98
USP41-204ENST00000486536 TROQ12816 1431 aaPredicted RBP8.92□□□□□ -0.98
USP41-204ENST00000486536 PLEKHD1A6NEE1 506 aa8.92□□□□□ -0.98
USP41-204ENST00000486536 TMEM88BA6NKF7 163 aa8.92□□□□□ -0.98
USP41-204ENST00000486536 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
USP41-204ENST00000486536 NBPF3Q9H094 633 aa8.92□□□□□ -0.98
USP41-204ENST00000486536 PHLDB1Q86UU1 1377 aa8.91□□□□□ -0.98
USP41-204ENST00000486536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP41-204ENST00000486536 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
USP41-204ENST00000486536 PBX2P40425 430 aa8.91□□□□□ -0.98
USP41-204ENST00000486536 MAGI3Q5TCQ9 1506 aa8.9□□□□□ -0.98
USP41-204ENST00000486536 NCOA2Q15596 1464 aa8.9□□□□□ -0.98
USP41-204ENST00000486536 CCNB3Q8WWL7 1395 aa8.9□□□□□ -0.98
USP41-204ENST00000486536 FBXO45P0C2W1 286 aa8.9□□□□□ -0.98
USP41-204ENST00000486536 IVNS1ABPQ9Y6Y0 642 aa8.9□□□□□ -0.98
USP41-204ENST00000486536 KDM5BQ9UGL1 1544 aa8.9□□□□□ -0.99
USP41-204ENST00000486536 ZBBXA8MT70 800 aa8.89□□□□□ -0.99
USP41-204ENST00000486536 USB1Q9BQ65 265 aaKnown RBP8.89□□□□□ -0.99
USP41-204ENST00000486536 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
USP41-204ENST00000486536 MYOM3Q5VTT5 1437 aa8.88□□□□□ -0.99
USP41-204ENST00000486536 BRICD5Q6PL45 260 aa8.88□□□□□ -0.99
USP41-204ENST00000486536 BLOC1S3Q6QNY0 202 aa8.88□□□□□ -0.99
USP41-204ENST00000486536 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
USP41-204ENST00000486536 LRCH3Q96II8 777 aa8.88□□□□□ -0.99
USP41-204ENST00000486536 LRRIQ1Q96JM4 1722 aa8.88□□□□□ -0.99
USP41-204ENST00000486536 MIA2Q96PC5 1412 aa8.88□□□□□ -0.99
USP41-204ENST00000486536 PIK3CDO00329 1044 aa8.87□□□□□ -0.99
USP41-204ENST00000486536 MRPL50Q8N5N7 158 aaKnown RBP8.87□□□□□ -0.99
USP41-204ENST00000486536 NFATC2IPQ8NCF5 419 aa8.87□□□□□ -0.99
USP41-204ENST00000486536 PRR14Q9BWN1 585 aa8.87□□□□□ -0.99
USP41-204ENST00000486536 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
USP41-204ENST00000486536 SUPT6HQ7KZ85 1726 aaKnown RBP8.87□□□□□ -0.99
USP41-204ENST00000486536 FGD6Q6ZV73 1430 aa8.87□□□□□ -0.99
USP41-204ENST00000486536 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
USP41-204ENST00000486536 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
USP41-204ENST00000486536 ZNF687Q8N1G0 1237 aa8.86□□□□□ -0.99
USP41-204ENST00000486536 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
USP41-204ENST00000486536 SKIP12755 728 aa8.85□□□□□ -0.99
USP41-204ENST00000486536 FAM69CQ0P6D2 419 aa8.85□□□□□ -0.99
USP41-204ENST00000486536 ZNF428Q96B54 188 aa8.85□□□□□ -0.99
USP41-204ENST00000486536 ABCC10Q5T3U5 1492 aa8.84□□□□□ -0.99
USP41-204ENST00000486536 KDM6BO15054 1643 aa8.84□□□□□ -0.99
USP41-204ENST00000486536 TK2O00142 265 aa8.84□□□□□ -0.99
USP41-204ENST00000486536 F12P00748 615 aaPredicted RBP8.84□□□□□ -0.99
USP41-204ENST00000486536 CCDC27Q2M243 656 aa8.84□□□□□ -0.99
USP41-204ENST00000486536 SND1Q7KZF4 910 aaKnown RBP eCLIP8.84□□□□□ -0.99
USP41-204ENST00000486536 SCUBE3Q8IX30 993 aa8.84□□□□□ -0.99
USP41-204ENST00000486536 ADCY10Q96PN6 1610 aa8.83□□□□□ -1
USP41-204ENST00000486536 TCOF1Q13428 1488 aaKnown RBP8.83□□□□□ -1
USP41-204ENST00000486536 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
USP41-204ENST00000486536 FMNL1O95466 1100 aaPredicted RBP8.83□□□□□ -1
USP41-204ENST00000486536 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
USP41-204ENST00000486536 OTUD5Q96G74 571 aa8.83□□□□□ -1
USP41-204ENST00000486536 MAP10Q9P2G4 905 aa8.83□□□□□ -1
USP41-204ENST00000486536 GNEQ9Y223 722 aaKnown RBP8.83□□□□□ -1
USP41-204ENST00000486536 KIF14Q15058 1648 aa8.83□□□□□ -1
USP41-204ENST00000486536 DIP2BQ9P265 1576 aa8.82□□□□□ -1
USP41-204ENST00000486536 GPATCH8Q9UKJ3 1502 aaKnown RBP8.82□□□□□ -1
USP41-204ENST00000486536 USP17L3A6NCW0 530 aa8.82□□□□□ -1
USP41-204ENST00000486536 USP17L4A6NCW7 530 aa8.82□□□□□ -1
USP41-204ENST00000486536 JUNDP17535 347 aa8.82□□□□□ -1
USP41-204ENST00000486536 CTHP32929 405 aa8.82□□□□□ -1
USP41-204ENST00000486536 PPP4CP60510 307 aa8.82□□□□□ -1
USP41-204ENST00000486536 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
USP41-204ENST00000486536 PTPRNQ16849 979 aa8.82□□□□□ -1
USP41-204ENST00000486536 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
USP41-204ENST00000486536 USP17L2Q6R6M4 530 aa8.82□□□□□ -1
USP41-204ENST00000486536 USP17L1Q7RTZ2 530 aa8.82□□□□□ -1
USP41-204ENST00000486536 PLEKHM2Q8IWE5 1019 aa8.82□□□□□ -1
USP41-204ENST00000486536 THAP11Q96EK4 314 aa8.82□□□□□ -1
USP41-204ENST00000486536 NOVA2Q9UNW9 492 aaKnown RBP8.82□□□□□ -1
USP41-204ENST00000486536 MAPKBP1O60336 1514 aa8.81□□□□□ -1
USP41-204ENST00000486536 ZCCHC11Q5TAX3 1644 aaKnown RBP8.81□□□□□ -1
USP41-204ENST00000486536 EMP3P54852 163 aa8.81□□□□□ -1
USP41-204ENST00000486536 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
USP41-204ENST00000486536 STK32AQ8WU08 396 aa8.81□□□□□ -1
USP41-204ENST00000486536 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
USP41-204ENST00000486536 CFDP1Q9UEE9 299 aaPredicted RBP8.81□□□□□ -1
USP41-204ENST00000486536 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
USP41-204ENST00000486536 WDR7Q9Y4E6 1490 aa8.81□□□□□ -1
USP41-204ENST00000486536 USP17L5A8MUK1 530 aa8.8□□□□□ -1
USP41-204ENST00000486536 NR1I2O75469 434 aa8.8□□□□□ -1
USP41-204ENST00000486536 FAM174AQ8TBP5 190 aa8.8□□□□□ -1
USP41-204ENST00000486536 MKRN1Q9UHC7 482 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms