RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	NWD1	Q149M9	1564 aa		10.44	□□□□□ -0.74
PUDP-204	ENST00000486446	TMEM94	Q12767	1356 aa		10.44	□□□□□ -0.74
PUDP-204	ENST00000486446	ANKRD13D	Q6ZTN6	518 aa		10.44	□□□□□ -0.74
PUDP-204	ENST00000486446	NKTR	P30414	1462 aa	Known RBP	10.43	□□□□□ -0.74
PUDP-204	ENST00000486446	OSBP	P22059	807 aa		10.43	□□□□□ -0.74
PUDP-204	ENST00000486446	MYT1	Q01538	1121 aa		10.43	□□□□□ -0.74
PUDP-204	ENST00000486446	RBM33	Q96EV2	1170 aa	Known RBP	10.43	□□□□□ -0.74
PUDP-204	ENST00000486446	TBX22	Q9Y458	520 aa		10.43	□□□□□ -0.74
PUDP-204	ENST00000486446	DIP2A	Q14689	1571 aa		10.43	□□□□□ -0.74
PUDP-204	ENST00000486446	ADAMTS13	Q76LX8	1427 aa		10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	CHD2	O14647	1828 aa	Known RBP	10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	GRXCR2	A6NFK2	248 aa		10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	TK2	O00142	265 aa		10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	PRIM1	P49642	420 aa	Known RBP	10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	EN1	Q05925	392 aa	Predicted RBP	10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	NBR1	Q14596	966 aa		10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	C6orf132	Q5T0Z8	1188 aa		10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	SLC4A5	Q9BY07	1137 aa		10.42	□□□□□ -0.74
PUDP-204	ENST00000486446	SETD5	Q9C0A6	1442 aa		10.41	□□□□□ -0.74
PUDP-204	ENST00000486446	SETD1A	O15047	1707 aa	Known RBP	10.41	□□□□□ -0.74
PUDP-204	ENST00000486446	NEXMIF	Q5QGS0	1516 aa		10.4	□□□□□ -0.74
PUDP-204	ENST00000486446	MLLT3	P42568	568 aa	Predicted RBP	10.4	□□□□□ -0.74
PUDP-204	ENST00000486446	ADGRD1	Q6QNK2	874 aa		10.4	□□□□□ -0.74
PUDP-204	ENST00000486446	C14orf37	Q86TY3	774 aa		10.4	□□□□□ -0.74
PUDP-204	ENST00000486446	MPHOSPH9	Q99550	1183 aa		10.4	□□□□□ -0.74
PUDP-204	ENST00000486446	MSH6	P52701	1360 aa		10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	PIK3R4	Q99570	1358 aa		10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	SETBP1	Q9Y6X0	1596 aa		10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	ACIN1	Q9UKV3	1341 aa	Known RBP	10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	PPP1R3G	B7ZBB8	358 aa		10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	COL9A1	P20849	921 aa		10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	PLSCR2	Q9NRY7	297 aa		10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	NRXN3	Q9Y4C0	1643 aa		10.39	□□□□□ -0.75
PUDP-204	ENST00000486446	SEMA3E	O15041	775 aa		10.38	□□□□□ -0.75
PUDP-204	ENST00000486446	MMRN1	Q13201	1228 aa		10.38	□□□□□ -0.75
PUDP-204	ENST00000486446	ZBED2	Q9BTP6	218 aa		10.38	□□□□□ -0.75
PUDP-204	ENST00000486446	VPS9D1	Q9Y2B5	631 aa		10.38	□□□□□ -0.75
PUDP-204	ENST00000486446	AMOTL2	Q9Y2J4	779 aa		10.38	□□□□□ -0.75
PUDP-204	ENST00000486446	CCDC144A	A2RUR9	1427 aa		10.38	□□□□□ -0.75
PUDP-204	ENST00000486446	RAB3GAP2	Q9H2M9	1393 aa		10.38	□□□□□ -0.75
PUDP-204	ENST00000486446	HR	O43593	1189 aa		10.37	□□□□□ -0.75
PUDP-204	ENST00000486446	RPGRIP1L	Q68CZ1	1315 aa		10.36	□□□□□ -0.75
PUDP-204	ENST00000486446	PTPRU	Q92729	1446 aa		10.36	□□□□□ -0.75
PUDP-204	ENST00000486446	TSR1	Q2NL82	804 aa	Known RBP	10.36	□□□□□ -0.75
PUDP-204	ENST00000486446	PPL	O60437	1756 aa		10.35	□□□□□ -0.75
PUDP-204	ENST00000486446	MAP3K7	O43318	606 aa		10.35	□□□□□ -0.75
PUDP-204	ENST00000486446	RGL3	Q3MIN7	710 aa		10.35	□□□□□ -0.75
PUDP-204	ENST00000486446	MET	P08581	1390 aa		10.35	□□□□□ -0.75
PUDP-204	ENST00000486446	XRN1	Q8IZH2	1706 aa	Known RBP	10.35	□□□□□ -0.75
PUDP-204	ENST00000486446	ROBO1	Q9Y6N7	1651 aa		10.34	□□□□□ -0.75
PUDP-204	ENST00000486446	FAM135B	Q49AJ0	1406 aa		10.34	□□□□□ -0.75
PUDP-204	ENST00000486446	NCOA3	Q9Y6Q9	1424 aa		10.34	□□□□□ -0.75
PUDP-204	ENST00000486446	TESPA1	A2RU30	521 aa	Predicted RBP	10.34	□□□□□ -0.75
PUDP-204	ENST00000486446	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.33	□□□□□ -0.76
PUDP-204	ENST00000486446	ATF3	P18847	181 aa		10.33	□□□□□ -0.76
PUDP-204	ENST00000486446	C19orf44	Q9H6X5	657 aa		10.33	□□□□□ -0.76
PUDP-204	ENST00000486446	SLAIN2	Q9P270	581 aa		10.33	□□□□□ -0.76
PUDP-204	ENST00000486446	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.32	□□□□□ -0.76
PUDP-204	ENST00000486446	SPATA31E1	Q6ZUB1	1445 aa		10.32	□□□□□ -0.76
PUDP-204	ENST00000486446	DHX57	Q6P158	1386 aa	Known RBP	10.31	□□□□□ -0.76
PUDP-204	ENST00000486446	IFT172	Q9UG01	1749 aa		10.31	□□□□□ -0.76
PUDP-204	ENST00000486446	ONECUT3	O60422	494 aa	Predicted RBP	10.31	□□□□□ -0.76
PUDP-204	ENST00000486446	TIMELESS	Q9UNS1	1208 aa		10.31	□□□□□ -0.76
PUDP-204	ENST00000486446	ANKRD30B	Q9BXX2	1392 aa		10.3	□□□□□ -0.76
PUDP-204	ENST00000486446	PROX2	Q3B8N5	592 aa		10.3	□□□□□ -0.76
PUDP-204	ENST00000486446	ADGRF5	Q8IZF2	1346 aa		10.3	□□□□□ -0.76
PUDP-204	ENST00000486446	PHLPP1	O60346	1717 aa		10.3	□□□□□ -0.76
PUDP-204	ENST00000486446	RXRB	P28702	533 aa		10.29	□□□□□ -0.76
PUDP-204	ENST00000486446	DIEXF	Q68CQ4	756 aa	Known RBP	10.29	□□□□□ -0.76
PUDP-204	ENST00000486446	CDHR5	Q9HBB8	845 aa		10.29	□□□□□ -0.76
PUDP-204	ENST00000486446	NALCN	Q8IZF0	1738 aa		10.28	□□□□□ -0.76
PUDP-204	ENST00000486446	DCC	P43146	1447 aa		10.28	□□□□□ -0.76
PUDP-204	ENST00000486446	ADGRL3	Q9HAR2	1447 aa		10.28	□□□□□ -0.76
PUDP-204	ENST00000486446	MEX3C	Q5U5Q3	659 aa	Known RBP	10.28	□□□□□ -0.76
PUDP-204	ENST00000486446	ZNF772	Q68DY9	489 aa	Predicted RBP	10.28	□□□□□ -0.76
PUDP-204	ENST00000486446	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.28	□□□□□ -0.76
PUDP-204	ENST00000486446	RABGEF1	Q9UJ41	708 aa		10.28	□□□□□ -0.76
PUDP-204	ENST00000486446	TRIM6-TRIM34	B2RNG4	842 aa		10.27	□□□□□ -0.77
PUDP-204	ENST00000486446	ROBO2	Q9HCK4	1378 aa		10.26	□□□□□ -0.77
PUDP-204	ENST00000486446	PTCH1	Q13635	1447 aa		10.26	□□□□□ -0.77
PUDP-204	ENST00000486446	SMYD5	Q6GMV2	418 aa		10.26	□□□□□ -0.77
PUDP-204	ENST00000486446	RNF166	Q96A37	237 aa	Predicted RBP	10.26	□□□□□ -0.77
PUDP-204	ENST00000486446	STK26	Q9P289	416 aa		10.26	□□□□□ -0.77
PUDP-204	ENST00000486446	PIK3C2G	O75747	1445 aa		10.25	□□□□□ -0.77
PUDP-204	ENST00000486446	MST1R	Q04912	1400 aa		10.25	□□□□□ -0.77
PUDP-204	ENST00000486446	PRSS12	P56730	875 aa		10.25	□□□□□ -0.77
PUDP-204	ENST00000486446	TMEM132E	Q6IEE7	984 aa		10.25	□□□□□ -0.77
PUDP-204	ENST00000486446	COL16A1	Q07092	1604 aa	Predicted RBP	10.25	□□□□□ -0.77
PUDP-204	ENST00000486446	MYOM2	P54296	1465 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	ASXL1	Q8IXJ9	1541 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	BRINP3	Q76B58	766 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	CDCA7L	Q96GN5	454 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	KIAA1468	Q9P260	1216 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	TSKS	Q9UJT2	592 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	JCAD	Q9P266	1359 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	PRAG1	Q86YV5	1406 aa		10.24	□□□□□ -0.77
PUDP-204	ENST00000486446	LAMC1	P11047	1609 aa		10.23	□□□□□ -0.77
PUDP-204	ENST00000486446	RBM27	Q9P2N5	1060 aa	Known RBP	10.23	□□□□□ -0.77
PUDP-204	ENST00000486446	LRPPRC	P42704	1394 aa	Known RBP	10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms