RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 MYT1Q01538 1121 aa27.39■■□□□ 1.98
LIMK1-206ENST00000486361 NSD3Q9BZ95 1437 aa27.39■■□□□ 1.97
LIMK1-206ENST00000486361 SPATA31A1Q5TZJ5 1347 aa27.39■■□□□ 1.97
LIMK1-206ENST00000486361 ONECUT3O60422 494 aaPredicted RBP27.38■■□□□ 1.97
LIMK1-206ENST00000486361 PANK3Q9H999 370 aa27.38■■□□□ 1.97
LIMK1-206ENST00000486361 USP54Q70EL1 1684 aa27.37■■□□□ 1.97
LIMK1-206ENST00000486361 KIF7Q2M1P5 1343 aa27.37■■□□□ 1.97
LIMK1-206ENST00000486361 COL18A1P39060 1754 aa27.36■■□□□ 1.97
LIMK1-206ENST00000486361 COL5A2P05997 1499 aaPredicted RBP27.36■■□□□ 1.97
LIMK1-206ENST00000486361 UPF1Q92900 1129 aaKnown RBP eCLIP27.33■■□□□ 1.97
LIMK1-206ENST00000486361 TOM1L2Q6ZVM7 507 aa27.32■■□□□ 1.96
LIMK1-206ENST00000486361 CSB-PGBD3P0DP91 1061 aa27.31■■□□□ 1.96
LIMK1-206ENST00000486361 TCP11L2Q8N4U5 519 aa27.3■■□□□ 1.96
LIMK1-206ENST00000486361 RGPD5Q99666 1765 aa27.3■■□□□ 1.96
LIMK1-206ENST00000486361 RRS1Q15050 365 aaKnown RBP27.29■■□□□ 1.96
LIMK1-206ENST00000486361 CRB1P82279 1406 aa27.28■■□□□ 1.96
LIMK1-206ENST00000486361 MAP3K19Q56UN5 1328 aa27.28■■□□□ 1.96
LIMK1-206ENST00000486361 WDR17Q8IZU2 1322 aa27.28■■□□□ 1.96
LIMK1-206ENST00000486361 CGNL1Q0VF96 1302 aa27.27■■□□□ 1.96
LIMK1-206ENST00000486361 KRT27Q7Z3Y8 459 aa27.27■■□□□ 1.96
LIMK1-206ENST00000486361 BRWD3Q6RI45 1802 aa27.27■■□□□ 1.96
LIMK1-206ENST00000486361 AMPHP49418 695 aa27.26■■□□□ 1.95
LIMK1-206ENST00000486361 BARGINQ6ZT62 677 aa27.26■■□□□ 1.95
LIMK1-206ENST00000486361 IP6K1Q92551 441 aa27.26■■□□□ 1.95
LIMK1-206ENST00000486361 LTN1O94822 1766 aa27.26■■□□□ 1.95
LIMK1-206ENST00000486361 KIF20BQ96Q89 1820 aa27.25■■□□□ 1.95
LIMK1-206ENST00000486361 FAM182BQ5T319 152 aa27.25■■□□□ 1.95
LIMK1-206ENST00000486361 LTV1Q96GA3 475 aaPredicted RBP27.25■■□□□ 1.95
LIMK1-206ENST00000486361 WASHC2AQ641Q2 1341 aa27.24■■□□□ 1.95
LIMK1-206ENST00000486361 ANKRD24Q8TF21 1146 aa27.24■■□□□ 1.95
LIMK1-206ENST00000486361 THRAP3Q9Y2W1 955 aaKnown RBP27.23■■□□□ 1.95
LIMK1-206ENST00000486361 CCDC7Q96M83 1385 aa27.22■■□□□ 1.95
LIMK1-206ENST00000486361 HOXC9P31274 260 aa27.22■■□□□ 1.95
LIMK1-206ENST00000486361 ERBB3P21860 1342 aa27.21■■□□□ 1.95
LIMK1-206ENST00000486361 NLRP2Q9NX02 1062 aa27.21■■□□□ 1.95
LIMK1-206ENST00000486361 THSD7AQ9UPZ6 1657 aa27.21■■□□□ 1.95
LIMK1-206ENST00000486361 TNNT2P45379 298 aaPredicted RBP27.2■■□□□ 1.94
LIMK1-206ENST00000486361 CARD10Q9BWT7 1032 aa27.2■■□□□ 1.94
LIMK1-206ENST00000486361 ABCC6O95255 1503 aa27.2■■□□□ 1.94
LIMK1-206ENST00000486361 KNSTRNQ9Y448 316 aa27.19■■□□□ 1.94
LIMK1-206ENST00000486361 EMILIN1Q9Y6C2 1016 aa27.18■■□□□ 1.94
LIMK1-206ENST00000486361 BLMP54132 1417 aaPredicted RBP27.16■■□□□ 1.94
LIMK1-206ENST00000486361 PPM1GO15355 546 aaPredicted RBP27.15■■□□□ 1.94
LIMK1-206ENST00000486361 PDE3BQ13370 1112 aa27.15■■□□□ 1.94
LIMK1-206ENST00000486361 HSP90AB2PQ58FF8 381 aa27.15■■□□□ 1.94
LIMK1-206ENST00000486361 PER1O15534 1290 aaPredicted RBP27.12■■□□□ 1.93
LIMK1-206ENST00000486361 MORC1Q86VD1 984 aa27.11■■□□□ 1.93
LIMK1-206ENST00000486361 RTL1A6NKG5 1358 aa27.1■■□□□ 1.93
LIMK1-206ENST00000486361 CNGB1Q14028 1251 aaPredicted RBP27.1■■□□□ 1.93
LIMK1-206ENST00000486361 DDB1Q16531 1140 aa27.1■■□□□ 1.93
LIMK1-206ENST00000486361 AMER1Q5JTC6 1135 aaPredicted RBP27.1■■□□□ 1.93
LIMK1-206ENST00000486361 POLKQ9UBT6 870 aa27.1■■□□□ 1.93
LIMK1-206ENST00000486361 PEAK1Q9H792 1746 aa27.1■■□□□ 1.93
LIMK1-206ENST00000486361 NSD2O96028 1365 aa27.08■■□□□ 1.93
LIMK1-206ENST00000486361 FLT4P35916 1363 aa27.08■■□□□ 1.93
LIMK1-206ENST00000486361 CDCA7Q9BWT1 371 aaPredicted RBP27.07■■□□□ 1.92
LIMK1-206ENST00000486361 DISP2A7MBM2 1401 aa27.07■■□□□ 1.92
LIMK1-206ENST00000486361 CC2D1BQ5T0F9 858 aaKnown RBP27.06■■□□□ 1.92
LIMK1-206ENST00000486361 NBPF6Q5VWK0 638 aa27.06■■□□□ 1.92
LIMK1-206ENST00000486361 USHBP1Q8N6Y0 703 aa27.06■■□□□ 1.92
LIMK1-206ENST00000486361 NBPF4Q96M43 638 aa27.06■■□□□ 1.92
LIMK1-206ENST00000486361 INSRP06213 1382 aa27.06■■□□□ 1.92
LIMK1-206ENST00000486361 EXOC5O00471 708 aa27.05■■□□□ 1.92
LIMK1-206ENST00000486361 IL2RBP14784 551 aa27.05■■□□□ 1.92
LIMK1-206ENST00000486361 FAM196AQ6ZSG2 479 aa27.05■■□□□ 1.92
LIMK1-206ENST00000486361 CCDC125Q86Z20 511 aa27.05■■□□□ 1.92
LIMK1-206ENST00000486361 PARP4Q9UKK3 1724 aaKnown RBP27.04■■□□□ 1.92
LIMK1-206ENST00000486361 ANKRD26Q9UPS8 1709 aa27.04■■□□□ 1.92
LIMK1-206ENST00000486361 MAP2P11137 1827 aaKnown RBP27.03■■□□□ 1.92
LIMK1-206ENST00000486361 KIF24Q5T7B8 1368 aa27.03■■□□□ 1.92
LIMK1-206ENST00000486361 MARCH10Q8NA82 808 aaPredicted RBP27.03■■□□□ 1.92
LIMK1-206ENST00000486361 LRRC37A3O60309 1634 aa27.02■■□□□ 1.92
LIMK1-206ENST00000486361 SF3B2Q13435 895 aaKnown RBP27.02■■□□□ 1.92
LIMK1-206ENST00000486361 DEFB132Q7Z7B7 95 aa27.02■■□□□ 1.92
LIMK1-206ENST00000486361 EP400Q96L91 3159 aa27.02■■□□□ 1.92
LIMK1-206ENST00000486361 RGPD2P0DJD1 1756 aa27.02■■□□□ 1.92
LIMK1-206ENST00000486361 TRIM37O94972 964 aa27.01■■□□□ 1.91
LIMK1-206ENST00000486361 WNK3Q9BYP7 1800 aa27.01■■□□□ 1.91
LIMK1-206ENST00000486361 SMG6Q86US8 1419 aaKnown RBP27■■□□□ 1.91
LIMK1-206ENST00000486361 ZEB1P37275 1124 aaPredicted RBP26.99■■□□□ 1.91
LIMK1-206ENST00000486361 FAM208AQ9UK61 1670 aaKnown RBP26.95■■□□□ 1.91
LIMK1-206ENST00000486361 EIF4A2Q14240 407 aaKnown RBP26.95■■□□□ 1.9
LIMK1-206ENST00000486361 OVOS2A0A0G2JMS6 1433 aa26.94■■□□□ 1.9
LIMK1-206ENST00000486361 EYA1Q99502 592 aa26.94■■□□□ 1.9
LIMK1-206ENST00000486361 TNS2Q63HR2 1409 aa26.93■■□□□ 1.9
LIMK1-206ENST00000486361 DDX54Q8TDD1 881 aaKnown RBP26.93■■□□□ 1.9
LIMK1-206ENST00000486361 EN1Q05925 392 aaPredicted RBP26.92■■□□□ 1.9
LIMK1-206ENST00000486361 PTF1AQ7RTS3 328 aa26.92■■□□□ 1.9
LIMK1-206ENST00000486361 MEGF6O75095 1541 aa26.91■■□□□ 1.9
LIMK1-206ENST00000486361 BAG6P46379 1132 aa26.91■■□□□ 1.9
LIMK1-206ENST00000486361 RAPGEF4Q8WZA2 1011 aa26.91■■□□□ 1.9
LIMK1-206ENST00000486361 APBA3O96018 575 aa26.9■■□□□ 1.9
LIMK1-206ENST00000486361 MTHFSP49914 203 aa26.9■■□□□ 1.9
LIMK1-206ENST00000486361 NPC1L1Q9UHC9 1359 aa26.89■■□□□ 1.9
LIMK1-206ENST00000486361 TATP17735 454 aaPredicted RBP26.89■■□□□ 1.9
LIMK1-206ENST00000486361 ZCRB1Q8TBF4 217 aaKnown RBP26.89■■□□□ 1.9
LIMK1-206ENST00000486361 ACSBG1Q96GR2 724 aa26.88■■□□□ 1.89
LIMK1-206ENST00000486361 RGPD1P0DJD0 1748 aa26.87■■□□□ 1.89
LIMK1-206ENST00000486361 KCNQ2O43526 872 aa26.85■■□□□ 1.89
LIMK1-206ENST00000486361 EZH2Q15910 746 aaKnown RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms