RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
NELFCD-209ENST00000486263 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.66■□□□□ 0.58
NELFCD-209ENST00000486263 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
NELFCD-209ENST00000486263 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
NELFCD-209ENST00000486263 EMILIN1Q9Y6C2 1016 aa18.65■□□□□ 0.58
NELFCD-209ENST00000486263 ATRNO75882 1429 aa18.65■□□□□ 0.58
NELFCD-209ENST00000486263 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.57
NELFCD-209ENST00000486263 CRYBG1Q9Y4K1 1723 aa18.63■□□□□ 0.57
NELFCD-209ENST00000486263 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
NELFCD-209ENST00000486263 PHRF1Q9P1Y6 1649 aaKnown RBP18.63■□□□□ 0.57
NELFCD-209ENST00000486263 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
NELFCD-209ENST00000486263 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
NELFCD-209ENST00000486263 PRDM11Q9NQV5 511 aa18.62■□□□□ 0.57
NELFCD-209ENST00000486263 MAP2P11137 1827 aaKnown RBP18.61■□□□□ 0.57
NELFCD-209ENST00000486263 NFAT5O94916 1531 aa18.61■□□□□ 0.57
NELFCD-209ENST00000486263 KIF24Q5T7B8 1368 aa18.6■□□□□ 0.57
NELFCD-209ENST00000486263 FLT4P35916 1363 aa18.59■□□□□ 0.57
NELFCD-209ENST00000486263 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
NELFCD-209ENST00000486263 FAM83GA6ND36 823 aa18.59■□□□□ 0.57
NELFCD-209ENST00000486263 IP6K1Q92551 441 aa18.59■□□□□ 0.57
NELFCD-209ENST00000486263 COL14A1Q05707 1796 aaKnown RBP18.59■□□□□ 0.57
NELFCD-209ENST00000486263 RTL1A6NKG5 1358 aa18.58■□□□□ 0.57
NELFCD-209ENST00000486263 CPDO75976 1380 aa18.58■□□□□ 0.57
NELFCD-209ENST00000486263 PLCH1Q4KWH8 1693 aa18.58■□□□□ 0.57
NELFCD-209ENST00000486263 HOXC9P31274 260 aa18.58■□□□□ 0.56
NELFCD-209ENST00000486263 CHRNA2Q15822 529 aa18.58■□□□□ 0.56
NELFCD-209ENST00000486263 GJD4Q96KN9 370 aaPredicted RBP18.58■□□□□ 0.56
NELFCD-209ENST00000486263 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
NELFCD-209ENST00000486263 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
NELFCD-209ENST00000486263 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
NELFCD-209ENST00000486263 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
NELFCD-209ENST00000486263 VPS72Q15906 364 aa18.57■□□□□ 0.56
NELFCD-209ENST00000486263 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
NELFCD-209ENST00000486263 HSP90AB2PQ58FF8 381 aa18.56■□□□□ 0.56
NELFCD-209ENST00000486263 RGS12O14924 1447 aa18.56■□□□□ 0.56
NELFCD-209ENST00000486263 LTN1O94822 1766 aa18.55■□□□□ 0.56
NELFCD-209ENST00000486263 LTV1Q96GA3 475 aaPredicted RBP18.55■□□□□ 0.56
NELFCD-209ENST00000486263 INSRP06213 1382 aa18.55■□□□□ 0.56
NELFCD-209ENST00000486263 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
NELFCD-209ENST00000486263 BLMP54132 1417 aaPredicted RBP18.53■□□□□ 0.56
NELFCD-209ENST00000486263 EVA1CP58658 441 aa18.53■□□□□ 0.56
NELFCD-209ENST00000486263 BTG4Q9NY30 223 aa18.53■□□□□ 0.56
NELFCD-209ENST00000486263 NRAPQ86VF7 1730 aa18.52■□□□□ 0.56
NELFCD-209ENST00000486263 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.56
NELFCD-209ENST00000486263 EIF4A2Q14240 407 aaKnown RBP18.52■□□□□ 0.56
NELFCD-209ENST00000486263 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.56
NELFCD-209ENST00000486263 ANKRD24Q8TF21 1146 aa18.52■□□□□ 0.56
NELFCD-209ENST00000486263 PEAK1Q9H792 1746 aa18.52■□□□□ 0.55
NELFCD-209ENST00000486263 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
NELFCD-209ENST00000486263 GLI3P10071 1580 aa18.51■□□□□ 0.55
NELFCD-209ENST00000486263 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
NELFCD-209ENST00000486263 IL13P35225 146 aa18.5■□□□□ 0.55
NELFCD-209ENST00000486263 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
NELFCD-209ENST00000486263 ABCC6O95255 1503 aa18.49■□□□□ 0.55
NELFCD-209ENST00000486263 ONECUT3O60422 494 aaPredicted RBP18.49■□□□□ 0.55
NELFCD-209ENST00000486263 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
NELFCD-209ENST00000486263 STRN4Q9NRL3 753 aa18.49■□□□□ 0.55
NELFCD-209ENST00000486263 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
NELFCD-209ENST00000486263 ERBB3P21860 1342 aa18.47■□□□□ 0.55
NELFCD-209ENST00000486263 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.551e-6■□□□□ 9.8
NELFCD-209ENST00000486263 PNNQ9H307 717 aaKnown RBP18.46■□□□□ 0.55
NELFCD-209ENST00000486263 NLRP2Q9NX02 1062 aa18.46■□□□□ 0.55
NELFCD-209ENST00000486263 CCDC9Q9Y3X0 531 aaKnown RBP18.46■□□□□ 0.55
NELFCD-209ENST00000486263 SPATA31A5Q5VU36 1347 aa18.46■□□□□ 0.55
NELFCD-209ENST00000486263 SPATA31A7Q8IWB4 1347 aa18.46■□□□□ 0.55
NELFCD-209ENST00000486263 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
NELFCD-209ENST00000486263 NEFMP07197 916 aa18.45■□□□□ 0.54
NELFCD-209ENST00000486263 TOM1L2Q6ZVM7 507 aa18.45■□□□□ 0.54
NELFCD-209ENST00000486263 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
NELFCD-209ENST00000486263 COL18A1P39060 1754 aa18.45■□□□□ 0.54
NELFCD-209ENST00000486263 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
NELFCD-209ENST00000486263 EYA1Q99502 592 aa18.44■□□□□ 0.54
NELFCD-209ENST00000486263 HMOX1P09601 288 aa18.43■□□□□ 0.54
NELFCD-209ENST00000486263 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
NELFCD-209ENST00000486263 WDR17Q8IZU2 1322 aa18.43■□□□□ 0.54
NELFCD-209ENST00000486263 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
NELFCD-209ENST00000486263 COL5A2P05997 1499 aaPredicted RBP18.42■□□□□ 0.54
NELFCD-209ENST00000486263 NBPF6Q5VWK0 638 aa18.42■□□□□ 0.54
NELFCD-209ENST00000486263 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
NELFCD-209ENST00000486263 NBPF4Q96M43 638 aa18.42■□□□□ 0.54
NELFCD-209ENST00000486263 FCHSD2O94868 740 aa18.41■□□□□ 0.54
NELFCD-209ENST00000486263 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
NELFCD-209ENST00000486263 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
NELFCD-209ENST00000486263 SPATA31A1Q5TZJ5 1347 aa18.41■□□□□ 0.54
NELFCD-209ENST00000486263 IGSF1Q8N6C5 1336 aa18.41■□□□□ 0.54
NELFCD-209ENST00000486263 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.54
NELFCD-209ENST00000486263 CARD10Q9BWT7 1032 aa18.39■□□□□ 0.53
NELFCD-209ENST00000486263 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
NELFCD-209ENST00000486263 PRKAR2BP31323 418 aa18.38■□□□□ 0.53
NELFCD-209ENST00000486263 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
NELFCD-209ENST00000486263 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
NELFCD-209ENST00000486263 USP35Q9P2H5 1018 aa18.38■□□□□ 0.53
NELFCD-209ENST00000486263 CRB1P82279 1406 aa18.38■□□□□ 0.53
NELFCD-209ENST00000486263 BARGINQ6ZT62 677 aa18.37■□□□□ 0.53
NELFCD-209ENST00000486263 CCDC125Q86Z20 511 aa18.37■□□□□ 0.53
NELFCD-209ENST00000486263 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
NELFCD-209ENST00000486263 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
NELFCD-209ENST00000486263 RUNDC1Q96C34 613 aa18.37■□□□□ 0.53
NELFCD-209ENST00000486263 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
NELFCD-209ENST00000486263 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms