RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
THBS3-207ENST00000486260 PRDM11Q9NQV5 511 aa22.18■■□□□ 1.14
THBS3-207ENST00000486260 RTL1A6NKG5 1358 aa22.18■■□□□ 1.14
THBS3-207ENST00000486260 COL3A1P02461 1466 aaPredicted RBP22.17■■□□□ 1.14
THBS3-207ENST00000486260 AXIN2Q9Y2T1 843 aa22.17■■□□□ 1.14
THBS3-207ENST00000486260 ADAMTS2O95450 1211 aa22.16■■□□□ 1.14
THBS3-207ENST00000486260 SPATA31A6Q5VVP1 1343 aa22.15■■□□□ 1.14
THBS3-207ENST00000486260 FAM83GA6ND36 823 aa22.15■■□□□ 1.14
THBS3-207ENST00000486260 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
THBS3-207ENST00000486260 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
THBS3-207ENST00000486260 COL18A1P39060 1754 aa22.15■■□□□ 1.14
THBS3-207ENST00000486260 EIF4A2Q14240 407 aaKnown RBP22.13■■□□□ 1.13
THBS3-207ENST00000486260 LTV1Q96GA3 475 aaPredicted RBP22.13■■□□□ 1.13
THBS3-207ENST00000486260 IL13P35225 146 aa22.12■■□□□ 1.13
THBS3-207ENST00000486260 RGPD5Q99666 1765 aa22.12■■□□□ 1.13
THBS3-207ENST00000486260 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
THBS3-207ENST00000486260 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
THBS3-207ENST00000486260 NUDCQ9Y266 331 aa22.1■■□□□ 1.13
THBS3-207ENST00000486260 ABCC6O95255 1503 aa22.1■■□□□ 1.13
THBS3-207ENST00000486260 LRP6O75581 1613 aa22.1■■□□□ 1.13
THBS3-207ENST00000486260 U2SURPO15042 1029 aaKnown RBP22.1■■□□□ 1.13
THBS3-207ENST00000486260 WDR43Q15061 677 aaKnown RBP eCLIP22.1■■□□□ 1.13
THBS3-207ENST00000486260 LMO7Q8WWI1 1683 aa22.1■■□□□ 1.13
THBS3-207ENST00000486260 CAMTA1Q9Y6Y1 1673 aa22.09■■□□□ 1.13
THBS3-207ENST00000486260 ANKRD24Q8TF21 1146 aa22.09■■□□□ 1.13
THBS3-207ENST00000486260 COL14A1Q05707 1796 aaKnown RBP22.08■■□□□ 1.13
THBS3-207ENST00000486260 ADAMTS8Q9UP79 889 aa22.07■■□□□ 1.12
THBS3-207ENST00000486260 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
THBS3-207ENST00000486260 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
THBS3-207ENST00000486260 BTG4Q9NY30 223 aa22.07■■□□□ 1.12
THBS3-207ENST00000486260 ERBB3P21860 1342 aa22.06■■□□□ 1.12
THBS3-207ENST00000486260 C8orf37Q96NL8 207 aa22.05■■□□□ 1.12
THBS3-207ENST00000486260 EYA1Q99502 592 aa22.04■■□□□ 1.12
THBS3-207ENST00000486260 COL5A2P05997 1499 aaPredicted RBP22.04■■□□□ 1.12
THBS3-207ENST00000486260 CSB-PGBD3P0DP91 1061 aa22.03■■□□□ 1.12
THBS3-207ENST00000486260 EVA1CP58658 441 aa22.03■■□□□ 1.12
THBS3-207ENST00000486260 MEX3CQ5U5Q3 659 aaKnown RBP22.03■■□□□ 1.12
THBS3-207ENST00000486260 STRN4Q9NRL3 753 aa22.03■■□□□ 1.12
THBS3-207ENST00000486260 PLCH1Q4KWH8 1693 aa22.02■■□□□ 1.12
THBS3-207ENST00000486260 NBPF6Q5VWK0 638 aa22.02■■□□□ 1.12
THBS3-207ENST00000486260 NGLY1Q96IV0 654 aa22.02■■□□□ 1.12
THBS3-207ENST00000486260 NBPF4Q96M43 638 aa22.02■■□□□ 1.12
THBS3-207ENST00000486260 RGPD1P0DJD0 1748 aa22.02■■□□□ 1.12
THBS3-207ENST00000486260 RGPD2P0DJD1 1756 aa22.02■■□□□ 1.12
THBS3-207ENST00000486260 HMOX1P09601 288 aa22.02■■□□□ 1.11
THBS3-207ENST00000486260 IGSF1Q8N6C5 1336 aa22.01■■□□□ 1.11
THBS3-207ENST00000486260 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
THBS3-207ENST00000486260 AEBP1Q8IUX7 1158 aa22■■□□□ 1.11
THBS3-207ENST00000486260 USHBP1Q8N6Y0 703 aa22■■□□□ 1.11
THBS3-207ENST00000486260 WDR17Q8IZU2 1322 aa22■■□□□ 1.11
THBS3-207ENST00000486260 NLRP2Q9NX02 1062 aa21.99■■□□□ 1.11
THBS3-207ENST00000486260 SLIT2O94813 1529 aa21.99■■□□□ 1.11
THBS3-207ENST00000486260 LARP1Q6PKG0 1096 aaKnown RBP21.99■■□□□ 1.11
THBS3-207ENST00000486260 TOM1L2Q6ZVM7 507 aa21.97■■□□□ 1.11
THBS3-207ENST00000486260 CCDC146Q8IYE0 955 aa21.97■■□□□ 1.11
THBS3-207ENST00000486260 FNBP4Q8N3X1 1017 aaPredicted RBP21.97■■□□□ 1.11
THBS3-207ENST00000486260 RSPH6AQ9H0K4 717 aa21.97■■□□□ 1.11
THBS3-207ENST00000486260 NWD2Q9ULI1 1742 aa21.97■■□□□ 1.11
THBS3-207ENST00000486260 FCHSD2O94868 740 aa21.97■■□□□ 1.11
THBS3-207ENST00000486260 NRAPQ86VF7 1730 aa21.96■■□□□ 1.11
THBS3-207ENST00000486260 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
THBS3-207ENST00000486260 KDRP35968 1356 aa21.95■■□□□ 1.1
THBS3-207ENST00000486260 PRKAR2BP31323 418 aa21.94■■□□□ 1.1
THBS3-207ENST00000486260 UNC5CLQ8IV45 518 aa21.94■■□□□ 1.1
THBS3-207ENST00000486260 BCL9LQ86UU0 1499 aa21.94■■□□□ 1.1
THBS3-207ENST00000486260 PLEKHF1Q96S99 279 aa21.94■■□□□ 1.1
THBS3-207ENST00000486260 NCAPD2Q15021 1401 aa21.94■■□□□ 1.1
THBS3-207ENST00000486260 CARD10Q9BWT7 1032 aa21.93■■□□□ 1.1
THBS3-207ENST00000486260 USP21Q9UK80 565 aa21.93■■□□□ 1.1
THBS3-207ENST00000486260 CRB1P82279 1406 aa21.93■■□□□ 1.1
THBS3-207ENST00000486260 AFF2P51816 1311 aa21.93■■□□□ 1.1
THBS3-207ENST00000486260 RUNDC1Q96C34 613 aa21.92■■□□□ 1.1
THBS3-207ENST00000486260 PNNQ9H307 717 aaKnown RBP21.92■■□□□ 1.1
THBS3-207ENST00000486260 USP35Q9P2H5 1018 aa21.92■■□□□ 1.1
THBS3-207ENST00000486260 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
THBS3-207ENST00000486260 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
THBS3-207ENST00000486260 PHACTR3Q96KR7 559 aa21.9■■□□□ 1.1
THBS3-207ENST00000486260 YTHDC1Q96MU7 727 aaKnown RBP21.89■■□□□ 1.1
THBS3-207ENST00000486260 CCDC9Q9Y3X0 531 aaKnown RBP21.89■■□□□ 1.09
THBS3-207ENST00000486260 MAPK8IP3Q9UPT6 1336 aa21.88■■□□□ 1.09
THBS3-207ENST00000486260 APAF1O14727 1248 aa21.87■■□□□ 1.09
THBS3-207ENST00000486260 VPS72Q15906 364 aa21.87■■□□□ 1.09
THBS3-207ENST00000486260 SPATA31A1Q5TZJ5 1347 aa21.87■■□□□ 1.09
THBS3-207ENST00000486260 NEFMP07197 916 aa21.87■■□□□ 1.09
THBS3-207ENST00000486260 TCP11L2Q8N4U5 519 aa21.87■■□□□ 1.09
THBS3-207ENST00000486260 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
THBS3-207ENST00000486260 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.86■■□□□ 1.09
THBS3-207ENST00000486260 SPATA31A5Q5VU36 1347 aa21.86■■□□□ 1.09
THBS3-207ENST00000486260 SPATA31A7Q8IWB4 1347 aa21.86■■□□□ 1.09
THBS3-207ENST00000486260 HNRNPUQ00839 825 aaKnown RBP eCLIP21.85■■□□□ 1.09
THBS3-207ENST00000486260 MEGF6O75095 1541 aa21.85■■□□□ 1.09
THBS3-207ENST00000486260 TATP17735 454 aaPredicted RBP21.84■■□□□ 1.09
THBS3-207ENST00000486260 RRP7AQ9Y3A4 280 aaKnown RBP21.84■■□□□ 1.09
THBS3-207ENST00000486260 IL2RBP14784 551 aa21.83■■□□□ 1.09
THBS3-207ENST00000486260 SALL2Q9Y467 1007 aaPredicted RBP21.83■■□□□ 1.09
THBS3-207ENST00000486260 NEUROD2Q15784 382 aa21.82■■□□□ 1.08
THBS3-207ENST00000486260 TMPOP42166 694 aaKnown RBP21.82■■□□□ 1.08
THBS3-207ENST00000486260 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
THBS3-207ENST00000486260 TRPC5Q9UL62 973 aaPredicted RBP21.82■■□□□ 1.08
THBS3-207ENST00000486260 THRAP3Q9Y2W1 955 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms