RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 WNK3Q9BYP7 1800 aa14.59□□□□□ -0.07
SND1-213ENST00000486037 PAPPAQ13219 1627 aa14.59□□□□□ -0.07
SND1-213ENST00000486037 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
SND1-213ENST00000486037 MPHOSPH9Q99550 1183 aa14.58□□□□□ -0.08
SND1-213ENST00000486037 POLR3AO14802 1390 aaPredicted RBP14.58□□□□□ -0.08
SND1-213ENST00000486037 BCL9O00512 1426 aa14.58□□□□□ -0.08
SND1-213ENST00000486037 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
SND1-213ENST00000486037 GCP02774 474 aa14.57□□□□□ -0.08
SND1-213ENST00000486037 ABTB2Q8N961 1025 aa14.57□□□□□ -0.08
SND1-213ENST00000486037 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
SND1-213ENST00000486037 AKAP12Q02952 1782 aa14.56□□□□□ -0.08
SND1-213ENST00000486037 ZNF827Q17R98 1081 aa14.56□□□□□ -0.08
SND1-213ENST00000486037 NLGN2Q8NFZ4 835 aa14.56□□□□□ -0.08
SND1-213ENST00000486037 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
SND1-213ENST00000486037 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
SND1-213ENST00000486037 COL18A1P39060 1754 aa14.53□□□□□ -0.08
SND1-213ENST00000486037 ARHGEF28Q8N1W1 1705 aaKnown RBP14.53□□□□□ -0.08
SND1-213ENST00000486037 ATP10DQ9P241 1426 aa14.53□□□□□ -0.08
SND1-213ENST00000486037 YBX3P16989 372 aaKnown RBP eCLIP14.53□□□□□ -0.081e-12■□□□□ 10
SND1-213ENST00000486037 TOM1L2Q6ZVM7 507 aa14.53□□□□□ -0.08
SND1-213ENST00000486037 AXIN2Q9Y2T1 843 aa14.53□□□□□ -0.08
SND1-213ENST00000486037 HSPA6P17066 643 aa14.52□□□□□ -0.09
SND1-213ENST00000486037 CDK19Q9BWU1 502 aa14.52□□□□□ -0.09
SND1-213ENST00000486037 COL24A1Q17RW2 1714 aa14.5□□□□□ -0.09
SND1-213ENST00000486037 NHSQ6T4R5 1651 aa14.5□□□□□ -0.09
SND1-213ENST00000486037 PLEKHG3A1L390 1219 aa14.5□□□□□ -0.09
SND1-213ENST00000486037 TRIM26Q12899 539 aaPredicted RBP14.5□□□□□ -0.09
SND1-213ENST00000486037 ACSBG1Q96GR2 724 aa14.5□□□□□ -0.09
SND1-213ENST00000486037 LRRC4BQ9NT99 713 aa14.5□□□□□ -0.09
SND1-213ENST00000486037 WDR17Q8IZU2 1322 aa14.49□□□□□ -0.09
SND1-213ENST00000486037 NLRP13Q86W25 1043 aa14.49□□□□□ -0.09
SND1-213ENST00000486037 SLIT3O75094 1523 aa14.48□□□□□ -0.09
SND1-213ENST00000486037 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
SND1-213ENST00000486037 RGPD5Q99666 1765 aa14.47□□□□□ -0.09
SND1-213ENST00000486037 ADRA2BP18089 450 aa14.47□□□□□ -0.09
SND1-213ENST00000486037 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
SND1-213ENST00000486037 TUBGCP6Q96RT7 1819 aa14.46□□□□□ -0.09
SND1-213ENST00000486037 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.09
SND1-213ENST00000486037 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
SND1-213ENST00000486037 BTAF1O14981 1849 aa14.45□□□□□ -0.1
SND1-213ENST00000486037 PNPLA7Q6ZV29 1317 aa14.45□□□□□ -0.1
SND1-213ENST00000486037 TNS2Q63HR2 1409 aa14.45□□□□□ -0.1
SND1-213ENST00000486037 ADCY9O60503 1353 aa14.45□□□□□ -0.1
SND1-213ENST00000486037 EXOC5O00471 708 aa14.44□□□□□ -0.1
SND1-213ENST00000486037 CDCA7Q9BWT1 371 aaPredicted RBP14.44□□□□□ -0.1
SND1-213ENST00000486037 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
SND1-213ENST00000486037 PCGF6Q9BYE7 350 aa14.44□□□□□ -0.1
SND1-213ENST00000486037 GPBP1L1Q9HC44 474 aaPredicted RBP14.44□□□□□ -0.1
SND1-213ENST00000486037 CPSF1Q10570 1443 aaKnown RBP14.43□□□□□ -0.1
SND1-213ENST00000486037 POLD1P28340 1107 aa14.43□□□□□ -0.1
SND1-213ENST00000486037 NLRP6P59044 892 aa14.43□□□□□ -0.1
SND1-213ENST00000486037 QSER1Q2KHR3 1735 aa14.43□□□□□ -0.1
SND1-213ENST00000486037 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
SND1-213ENST00000486037 USP6P35125 1406 aa14.42□□□□□ -0.1
SND1-213ENST00000486037 PPIP5K1Q6PFW1 1433 aa14.42□□□□□ -0.1
SND1-213ENST00000486037 KCNQ4P56696 695 aa14.42□□□□□ -0.1
SND1-213ENST00000486037 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
SND1-213ENST00000486037 GRIN3BO60391 1043 aa14.41□□□□□ -0.1
SND1-213ENST00000486037 DCAF11Q8TEB1 546 aa14.41□□□□□ -0.1
SND1-213ENST00000486037 SLC16A10Q8TF71 515 aa14.41□□□□□ -0.1
SND1-213ENST00000486037 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
SND1-213ENST00000486037 PCNTO95613 3336 aa14.4□□□□□ -0.1
SND1-213ENST00000486037 CSB-PGBD3P0DP91 1061 aa14.4□□□□□ -0.1
SND1-213ENST00000486037 ARHGEF25Q86VW2 580 aa14.4□□□□□ -0.1
SND1-213ENST00000486037 ABCC6O95255 1503 aa14.4□□□□□ -0.1
SND1-213ENST00000486037 KIF3CO14782 793 aa14.39□□□□□ -0.11
SND1-213ENST00000486037 SOX12O15370 315 aa14.39□□□□□ -0.11
SND1-213ENST00000486037 CAPN15O75808 1086 aa14.39□□□□□ -0.11
SND1-213ENST00000486037 DNAJC5GQ8N7S2 189 aa14.39□□□□□ -0.11
SND1-213ENST00000486037 CABP2Q9NPB3 220 aa14.39□□□□□ -0.11
SND1-213ENST00000486037 COL13A1Q5TAT6 717 aaPredicted RBP14.38□□□□□ -0.11
SND1-213ENST00000486037 KAT6BQ8WYB5 2073 aa14.37□□□□□ -0.11
SND1-213ENST00000486037 TFCP2L1Q9NZI6 479 aa14.36□□□□□ -0.11
SND1-213ENST00000486037 CCDC7Q96M83 1385 aa14.35□□□□□ -0.11
SND1-213ENST00000486037 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
SND1-213ENST00000486037 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
SND1-213ENST00000486037 CABP1Q9NZU7 370 aa14.35□□□□□ -0.11
SND1-213ENST00000486037 NFAT5O94916 1531 aa14.35□□□□□ -0.11
SND1-213ENST00000486037 WWC3Q9ULE0 1092 aa14.34□□□□□ -0.11
SND1-213ENST00000486037 APLP1P51693 650 aa14.32□□□□□ -0.12
SND1-213ENST00000486037 SLC27A3Q5K4L6 730 aa14.32□□□□□ -0.12
SND1-213ENST00000486037 COL23A1Q86Y22 540 aaPredicted RBP14.32□□□□□ -0.12
SND1-213ENST00000486037 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
SND1-213ENST00000486037 HTRA3P83110 453 aa14.31□□□□□ -0.12
SND1-213ENST00000486037 NBPF1Q3BBV0 1214 aa14.3□□□□□ -0.12
SND1-213ENST00000486037 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
SND1-213ENST00000486037 NSD2O96028 1365 aa14.3□□□□□ -0.12
SND1-213ENST00000486037 LY75O60449 1722 aa14.29□□□□□ -0.12
SND1-213ENST00000486037 MSH5O43196 834 aa14.29□□□□□ -0.12
SND1-213ENST00000486037 IL2RBP14784 551 aa14.29□□□□□ -0.12
SND1-213ENST00000486037 NLRP2Q9NX02 1062 aa14.29□□□□□ -0.12
SND1-213ENST00000486037 ERBB3P21860 1342 aa14.29□□□□□ -0.12
SND1-213ENST00000486037 KCNH5Q8NCM2 988 aa14.28□□□□□ -0.12
SND1-213ENST00000486037 CD2APQ9Y5K6 639 aa14.27□□□□□ -0.13
SND1-213ENST00000486037 WDR90Q96KV7 1748 aa14.27□□□□□ -0.13
SND1-213ENST00000486037 PRELPP51888 382 aa14.26□□□□□ -0.13
SND1-213ENST00000486037 DDX54Q8TDD1 881 aaKnown RBP14.26□□□□□ -0.13
SND1-213ENST00000486037 DOT1LQ8TEK3 1739 aa14.26□□□□□ -0.13
SND1-213ENST00000486037 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
SND1-213ENST00000486037 CENPJQ9HC77 1338 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms