RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 TTC21BQ7Z4L5 1316 aa29.67■■■□□ 2.34
LMBR1-217ENST00000485985 NFAT5O94916 1531 aa29.66■■■□□ 2.34
LMBR1-217ENST00000485985 KTN1Q86UP2 1357 aaKnown RBP29.64■■■□□ 2.34
LMBR1-217ENST00000485985 TOM1L2Q6ZVM7 507 aa29.64■■■□□ 2.34
LMBR1-217ENST00000485985 ZNF692Q9BU19 519 aaPredicted RBP29.64■■■□□ 2.34
LMBR1-217ENST00000485985 PEAK1Q9H792 1746 aa29.64■■■□□ 2.34
LMBR1-217ENST00000485985 OVOS2A0A0G2JMS6 1433 aa29.63■■■□□ 2.33
LMBR1-217ENST00000485985 OVOS2A0A0J9YW53 1432 aa29.63■■■□□ 2.33
LMBR1-217ENST00000485985 OVOS2Q6IE36 1432 aa29.63■■■□□ 2.33
LMBR1-217ENST00000485985 AXIN2Q9Y2T1 843 aa29.62■■■□□ 2.33
LMBR1-217ENST00000485985 LRRC37A3O60309 1634 aa29.62■■■□□ 2.33
LMBR1-217ENST00000485985 TTC21AQ8NDW8 1320 aa29.62■■■□□ 2.33
LMBR1-217ENST00000485985 DDB1Q16531 1140 aa29.61■■■□□ 2.33
LMBR1-217ENST00000485985 LTN1O94822 1766 aa29.61■■■□□ 2.33
LMBR1-217ENST00000485985 SBF2Q86WG5 1849 aa29.59■■■□□ 2.33
LMBR1-217ENST00000485985 WDR17Q8IZU2 1322 aa29.59■■■□□ 2.33
LMBR1-217ENST00000485985 ARHGEF25Q86VW2 580 aa29.58■■■□□ 2.33
LMBR1-217ENST00000485985 PLSCR1O15162 318 aa29.57■■■□□ 2.32
LMBR1-217ENST00000485985 KCNH5Q8NCM2 988 aa29.57■■■□□ 2.32
LMBR1-217ENST00000485985 RGPD3A6NKT7 1758 aaPredicted RBP29.55■■■□□ 2.32
LMBR1-217ENST00000485985 RGPD4Q7Z3J3 1758 aa29.55■■■□□ 2.32
LMBR1-217ENST00000485985 ABCC6O95255 1503 aa29.55■■■□□ 2.32
LMBR1-217ENST00000485985 CDCA7Q9BWT1 371 aaPredicted RBP29.54■■■□□ 2.32
LMBR1-217ENST00000485985 SOX12O15370 315 aa29.53■■■□□ 2.32
LMBR1-217ENST00000485985 MARCH10Q8NA82 808 aaPredicted RBP29.53■■■□□ 2.32
LMBR1-217ENST00000485985 TESK2Q96S53 571 aa29.53■■■□□ 2.32
LMBR1-217ENST00000485985 BCL11BQ9C0K0 894 aaPredicted RBP29.53■■■□□ 2.32
LMBR1-217ENST00000485985 SPON1Q9HCB6 807 aa29.53■■■□□ 2.32
LMBR1-217ENST00000485985 A0A1W2PP64 1363 aa29.52■■■□□ 2.32
LMBR1-217ENST00000485985 PTF1AQ7RTS3 328 aa29.52■■■□□ 2.32
LMBR1-217ENST00000485985 USP31Q70CQ4 1352 aa29.52■■■□□ 2.32
LMBR1-217ENST00000485985 KCNQ2O43526 872 aa29.51■■■□□ 2.31
LMBR1-217ENST00000485985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.51■■■□□ 2.312e-6■■□□□ 12.3
LMBR1-217ENST00000485985 TMC1Q8TDI8 760 aa29.51■■■□□ 2.31
LMBR1-217ENST00000485985 CARD10Q9BWT7 1032 aa29.51■■■□□ 2.31
LMBR1-217ENST00000485985 SLC12A5Q9H2X9 1139 aa29.51■■■□□ 2.31
LMBR1-217ENST00000485985 EDC4Q6P2E9 1401 aaKnown RBP29.51■■■□□ 2.31
LMBR1-217ENST00000485985 BCL9O00512 1426 aa29.49■■■□□ 2.31
LMBR1-217ENST00000485985 ST20-MTHFSA0A0A6YYL1 179 aa29.49■■■□□ 2.31
LMBR1-217ENST00000485985 CSB-PGBD3P0DP91 1061 aa29.49■■■□□ 2.31
LMBR1-217ENST00000485985 NME9Q86XW9 330 aa29.49■■■□□ 2.31
LMBR1-217ENST00000485985 PPP1R1BQ9UD71 204 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-217ENST00000485985 PUS7Q96PZ0 661 aaKnown RBP29.46■■■□□ 2.31
LMBR1-217ENST00000485985 HDGFL2Q7Z4V5 671 aaPredicted RBP29.45■■■□□ 2.31
LMBR1-217ENST00000485985 PROM2Q8N271 834 aa29.45■■■□□ 2.31
LMBR1-217ENST00000485985 ANO8Q9HCE9 1232 aaPredicted RBP29.45■■■□□ 2.31
LMBR1-217ENST00000485985 USP47Q96K76 1375 aa29.43■■■□□ 2.3
LMBR1-217ENST00000485985 EXOC5O00471 708 aa29.43■■■□□ 2.3
LMBR1-217ENST00000485985 CCDC7Q96M83 1385 aa29.42■■■□□ 2.3
LMBR1-217ENST00000485985 NINLQ9Y2I6 1382 aa29.42■■■□□ 2.3
LMBR1-217ENST00000485985 TERF2IPQ9NYB0 399 aa29.42■■■□□ 2.3
LMBR1-217ENST00000485985 CASZ1Q86V15 1759 aa29.4■■■□□ 2.3
LMBR1-217ENST00000485985 MYOM1P52179 1685 aa29.38■■■□□ 2.29
LMBR1-217ENST00000485985 TXNRD1Q16881 649 aa29.37■■■□□ 2.29
LMBR1-217ENST00000485985 PDGFDQ9GZP0 370 aaPredicted RBP29.37■■■□□ 2.29
LMBR1-217ENST00000485985 YY1P25490 414 aa29.36■■■□□ 2.29
LMBR1-217ENST00000485985 TNS2Q63HR2 1409 aa29.35■■■□□ 2.29
LMBR1-217ENST00000485985 FAM208AQ9UK61 1670 aaKnown RBP29.34■■■□□ 2.29
LMBR1-217ENST00000485985 KIF20BQ96Q89 1820 aa29.34■■■□□ 2.29
LMBR1-217ENST00000485985 DCAF8L1A6NGE4 600 aa29.33■■■□□ 2.29
LMBR1-217ENST00000485985 ERBB3P21860 1342 aa29.33■■■□□ 2.29
LMBR1-217ENST00000485985 ANKRD36BQ8N2N9 1353 aa29.32■■■□□ 2.28
LMBR1-217ENST00000485985 NLRP2Q9NX02 1062 aa29.32■■■□□ 2.28
LMBR1-217ENST00000485985 STK32BQ9NY57 414 aa29.32■■■□□ 2.28
LMBR1-217ENST00000485985 ZBTB7AO95365 584 aa29.31■■■□□ 2.28
LMBR1-217ENST00000485985 SLC24A1O60721 1099 aa29.3■■■□□ 2.28
LMBR1-217ENST00000485985 SLC15A2Q16348 729 aa29.3■■■□□ 2.28
LMBR1-217ENST00000485985 RGPD2P0DJD1 1756 aa29.3■■■□□ 2.28
LMBR1-217ENST00000485985 PCGF6Q9BYE7 350 aa29.29■■■□□ 2.28
LMBR1-217ENST00000485985 NHSQ6T4R5 1651 aa29.28■■■□□ 2.28
LMBR1-217ENST00000485985 CLSPNQ9HAW4 1339 aa29.28■■■□□ 2.28
LMBR1-217ENST00000485985 TMF1P82094 1093 aa29.28■■■□□ 2.28
LMBR1-217ENST00000485985 IL2RBP14784 551 aa29.27■■■□□ 2.28
LMBR1-217ENST00000485985 PTGER2P43116 358 aa29.27■■■□□ 2.28
LMBR1-217ENST00000485985 ACSBG1Q96GR2 724 aa29.27■■■□□ 2.28
LMBR1-217ENST00000485985 ANKRD24Q8TF21 1146 aa29.26■■■□□ 2.27
LMBR1-217ENST00000485985 ATF5Q9Y2D1 282 aaPredicted RBP29.26■■■□□ 2.27
LMBR1-217ENST00000485985 TIMELESSQ9UNS1 1208 aa29.24■■■□□ 2.27
LMBR1-217ENST00000485985 COG3Q96JB2 828 aa29.21■■■□□ 2.27
LMBR1-217ENST00000485985 FBLN1P23142 703 aa29.19■■■□□ 2.26
LMBR1-217ENST00000485985 IP6K1Q92551 441 aa29.19■■■□□ 2.26
LMBR1-217ENST00000485985 MTFR1LQ9H019 292 aa29.19■■■□□ 2.26
LMBR1-217ENST00000485985 BTAF1O14981 1849 aa29.19■■■□□ 2.26
LMBR1-217ENST00000485985 SHANK3Q9BYB0 1731 aa29.19■■■□□ 2.26
LMBR1-217ENST00000485985 KAT6BQ8WYB5 2073 aa29.19■■■□□ 2.26
LMBR1-217ENST00000485985 MAP3K19Q56UN5 1328 aa29.19■■■□□ 2.26
LMBR1-217ENST00000485985 SGIP1Q9BQI5 828 aa29.16■■■□□ 2.26
LMBR1-217ENST00000485985 PAPPAQ13219 1627 aa29.16■■■□□ 2.26
LMBR1-217ENST00000485985 FYB1O15117 783 aa29.15■■■□□ 2.26
LMBR1-217ENST00000485985 SYT17Q9BSW7 474 aa29.15■■■□□ 2.26
LMBR1-217ENST00000485985 FHDC1Q9C0D6 1143 aaPredicted RBP29.15■■■□□ 2.26
LMBR1-217ENST00000485985 HOXC9P31274 260 aa29.14■■■□□ 2.26
LMBR1-217ENST00000485985 GGNBP2Q9H3C7 697 aa29.14■■■□□ 2.26
LMBR1-217ENST00000485985 CDCA8Q53HL2 280 aa29.13■■■□□ 2.25
LMBR1-217ENST00000485985 RTL1A6NKG5 1358 aa29.13■■■□□ 2.25
LMBR1-217ENST00000485985 LTV1Q96GA3 475 aaPredicted RBP29.12■■■□□ 2.25
LMBR1-217ENST00000485985 DDX54Q8TDD1 881 aaKnown RBP29.11■■■□□ 2.25
LMBR1-217ENST00000485985 LRRC4BQ9NT99 713 aa29.11■■■□□ 2.25
LMBR1-217ENST00000485985 ANKRD26Q9UPS8 1709 aa29.11■■■□□ 2.25
LMBR1-217ENST00000485985 NSD3Q9BZ95 1437 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms