RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 UPP2O95045 317 aa12.85□□□□□ -0.35
TRAPPC10-211ENST00000485621 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
TRAPPC10-211ENST00000485621 PTK2Q05397 1052 aa12.84□□□□□ -0.35
TRAPPC10-211ENST00000485621 PNMA1Q8ND90 353 aa12.84□□□□□ -0.35
TRAPPC10-211ENST00000485621 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
TRAPPC10-211ENST00000485621 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
TRAPPC10-211ENST00000485621 BMP2P12643 396 aa12.83□□□□□ -0.36
TRAPPC10-211ENST00000485621 VEGFBP49765 207 aa12.83□□□□□ -0.36
TRAPPC10-211ENST00000485621 LCE2CQ5TA81 110 aa12.83□□□□□ -0.36
TRAPPC10-211ENST00000485621 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
TRAPPC10-211ENST00000485621 MEIOBQ8N635 442 aa12.82□□□□□ -0.36
TRAPPC10-211ENST00000485621 KCTD15Q96SI1 283 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC10-211ENST00000485621 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC10-211ENST00000485621 ADAM32Q8TC27 787 aa12.81□□□□□ -0.36
TRAPPC10-211ENST00000485621 CDV3Q9UKY7 258 aaKnown RBP12.81□□□□□ -0.36
TRAPPC10-211ENST00000485621 MAN1A2O60476 641 aa12.8□□□□□ -0.36
TRAPPC10-211ENST00000485621 PPP1R26Q5T8A7 1209 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC10-211ENST00000485621 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
TRAPPC10-211ENST00000485621 GPSM3Q9Y4H4 160 aa12.8□□□□□ -0.36
TRAPPC10-211ENST00000485621 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
TRAPPC10-211ENST00000485621 WIPF1O43516 503 aa12.78□□□□□ -0.36
TRAPPC10-211ENST00000485621 TPRNQ4KMQ1 711 aa12.78□□□□□ -0.36
TRAPPC10-211ENST00000485621 TMEM259Q4ZIN3 620 aa12.78□□□□□ -0.36
TRAPPC10-211ENST00000485621 CBLBQ13191 982 aa12.76□□□□□ -0.37
TRAPPC10-211ENST00000485621 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
TRAPPC10-211ENST00000485621 TSEN34Q9BSV6 310 aaKnown RBP12.76□□□□□ -0.37
TRAPPC10-211ENST00000485621 RAB15P59190 212 aa12.75□□□□□ -0.37
TRAPPC10-211ENST00000485621 DHX9Q08211 1270 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-211ENST00000485621 INTS6LQ5JSJ4 861 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-211ENST00000485621 IRF7Q92985 503 aa12.75□□□□□ -0.37
TRAPPC10-211ENST00000485621 H3BM21 787 aa12.74□□□□□ -0.37
TRAPPC10-211ENST00000485621 INSM1Q01101 510 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC10-211ENST00000485621 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
TRAPPC10-211ENST00000485621 NBPF20Q3BBV1 942 aa12.73□□□□□ -0.37
TRAPPC10-211ENST00000485621 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
TRAPPC10-211ENST00000485621 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC10-211ENST00000485621 GMPRP36959 345 aa12.71□□□□□ -0.37
TRAPPC10-211ENST00000485621 Q6ZVU0 165 aa12.7□□□□□ -0.38
TRAPPC10-211ENST00000485621 DNMT3LQ9UJW3 386 aa12.7□□□□□ -0.38
TRAPPC10-211ENST00000485621 ERBB4Q15303 1308 aa12.69□□□□□ -0.38
TRAPPC10-211ENST00000485621 TMPRSS4Q9NRS4 437 aa12.69□□□□□ -0.38
TRAPPC10-211ENST00000485621 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
TRAPPC10-211ENST00000485621 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
TRAPPC10-211ENST00000485621 FIGNL2A6NMB9 653 aa12.66□□□□□ -0.38
TRAPPC10-211ENST00000485621 RELBQ01201 579 aa12.66□□□□□ -0.38
TRAPPC10-211ENST00000485621 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC10-211ENST00000485621 ZBBXA8MT70 800 aa12.65□□□□□ -0.38
TRAPPC10-211ENST00000485621 STK17AQ9UEE5 414 aa12.65□□□□□ -0.38
TRAPPC10-211ENST00000485621 ERVH48-1M5A8F1 160 aa12.64□□□□□ -0.39
TRAPPC10-211ENST00000485621 SPINT1O43278 529 aa12.64□□□□□ -0.39
TRAPPC10-211ENST00000485621 ZNF784Q8NCA9 323 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC10-211ENST00000485621 PCDHB9Q9Y5E1 797 aa12.64□□□□□ -0.39
TRAPPC10-211ENST00000485621 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
TRAPPC10-211ENST00000485621 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.63□□□□□ -0.39
TRAPPC10-211ENST00000485621 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
TRAPPC10-211ENST00000485621 ESPNB1AK53 854 aa12.61□□□□□ -0.39
TRAPPC10-211ENST00000485621 INSM2Q96T92 566 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC10-211ENST00000485621 ZNF395Q9H8N7 513 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC10-211ENST00000485621 BANK1Q8NDB2 785 aa12.6□□□□□ -0.39
TRAPPC10-211ENST00000485621 CTSOP43234 321 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC10-211ENST00000485621 POLMQ9NP87 494 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC10-211ENST00000485621 ADD1P35611 737 aaKnown RBP12.58□□□□□ -0.4
TRAPPC10-211ENST00000485621 PTSQ03393 145 aa12.58□□□□□ -0.4
TRAPPC10-211ENST00000485621 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
TRAPPC10-211ENST00000485621 LILRA1O75019 489 aa12.57□□□□□ -0.4
TRAPPC10-211ENST00000485621 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC10-211ENST00000485621 ADH1AP07327 375 aa12.57□□□□□ -0.4
TRAPPC10-211ENST00000485621 VSIG8P0DPA2 414 aa12.57□□□□□ -0.4
TRAPPC10-211ENST00000485621 SEPT12Q8IYM1 358 aa12.57□□□□□ -0.4
TRAPPC10-211ENST00000485621 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
TRAPPC10-211ENST00000485621 ZSCAN1Q8NBB4 408 aa12.56□□□□□ -0.4
TRAPPC10-211ENST00000485621 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
TRAPPC10-211ENST00000485621 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
TRAPPC10-211ENST00000485621 NR1H3Q13133 447 aa12.54□□□□□ -0.4
TRAPPC10-211ENST00000485621 PTGIRP43119 386 aa12.53□□□□□ -0.4
TRAPPC10-211ENST00000485621 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
TRAPPC10-211ENST00000485621 APBB1O00213 710 aa12.52□□□□□ -0.41
TRAPPC10-211ENST00000485621 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
TRAPPC10-211ENST00000485621 RNF217Q8TC41 542 aa12.51□□□□□ -0.41
TRAPPC10-211ENST00000485621 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC10-211ENST00000485621 LORP23490 312 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC10-211ENST00000485621 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC10-211ENST00000485621 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
TRAPPC10-211ENST00000485621 SOCS7O14512 581 aa12.49□□□□□ -0.41
TRAPPC10-211ENST00000485621 GPR37L1O60883 481 aa12.48□□□□□ -0.41
TRAPPC10-211ENST00000485621 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
TRAPPC10-211ENST00000485621 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC10-211ENST00000485621 SLC35F4A4IF30 521 aa12.47□□□□□ -0.41
TRAPPC10-211ENST00000485621 ATP5J2-PTCD1G3V325 749 aa12.46□□□□□ -0.41
TRAPPC10-211ENST00000485621 MCCD1P59942 119 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC10-211ENST00000485621 ZNF592Q92610 1267 aa12.46□□□□□ -0.41
TRAPPC10-211ENST00000485621 GPR161Q8N6U8 529 aaKnown RBP12.45□□□□□ -0.42
TRAPPC10-211ENST00000485621 PCDHB11Q9Y5F2 797 aa12.45□□□□□ -0.42
TRAPPC10-211ENST00000485621 CDC14CA4D256 554 aa12.44□□□□□ -0.42
TRAPPC10-211ENST00000485621 MEN1O00255 615 aa12.44□□□□□ -0.42
TRAPPC10-211ENST00000485621 CC2D2BQ6DHV5 1058 aa12.44□□□□□ -0.42
TRAPPC10-211ENST00000485621 LYSMD3Q7Z3D4 306 aa12.44□□□□□ -0.42
TRAPPC10-211ENST00000485621 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
TRAPPC10-211ENST00000485621 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
TRAPPC10-211ENST00000485621 ITGA6P23229 1130 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms