RNA–Protein interactions for RNA: ENST00000485449.1

CBX8-204, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 581 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-204ENST00000485449 COL5A2P05997 1499 aaPredicted RBP26.76■■□□□ 1.87
CBX8-204ENST00000485449 CCDC9Q9Y3X0 531 aaKnown RBP26.76■■□□□ 1.87
CBX8-204ENST00000485449 EVA1CP58658 441 aa26.75■■□□□ 1.87
CBX8-204ENST00000485449 STRN4Q9NRL3 753 aa26.75■■□□□ 1.87
CBX8-204ENST00000485449 AXIN2Q9Y2T1 843 aa26.74■■□□□ 1.87
CBX8-204ENST00000485449 RGS12O14924 1447 aa26.73■■□□□ 1.87
CBX8-204ENST00000485449 SPATA31A5Q5VU36 1347 aa26.72■■□□□ 1.87
CBX8-204ENST00000485449 SPATA31A7Q8IWB4 1347 aa26.72■■□□□ 1.87
CBX8-204ENST00000485449 KNSTRNQ9Y448 316 aa26.72■■□□□ 1.87
CBX8-204ENST00000485449 FBLN1P23142 703 aa26.7■■□□□ 1.86
CBX8-204ENST00000485449 LARP1Q6PKG0 1096 aaKnown RBP26.7■■□□□ 1.86
CBX8-204ENST00000485449 NSD2O96028 1365 aa26.7■■□□□ 1.86
CBX8-204ENST00000485449 MAP3K19Q56UN5 1328 aa26.68■■□□□ 1.86
CBX8-204ENST00000485449 SPATA31A1Q5TZJ5 1347 aa26.68■■□□□ 1.86
CBX8-204ENST00000485449 PER1O15534 1290 aaPredicted RBP26.67■■□□□ 1.86
CBX8-204ENST00000485449 CRB1P82279 1406 aa26.66■■□□□ 1.86
CBX8-204ENST00000485449 IP6K1Q92551 441 aa26.66■■□□□ 1.86
CBX8-204ENST00000485449 MAP2P11137 1827 aaKnown RBP26.66■■□□□ 1.86
CBX8-204ENST00000485449 WDR17Q8IZU2 1322 aa26.65■■□□□ 1.86
CBX8-204ENST00000485449 BLMP54132 1417 aaPredicted RBP26.65■■□□□ 1.86
CBX8-204ENST00000485449 ONECUT3O60422 494 aaPredicted RBP26.65■■□□□ 1.86
CBX8-204ENST00000485449 RRS1Q15050 365 aaKnown RBP26.65■■□□□ 1.86
CBX8-204ENST00000485449 AMER1Q5JTC6 1135 aaPredicted RBP26.64■■□□□ 1.86
CBX8-204ENST00000485449 BRWD3Q6RI45 1802 aa26.64■■□□□ 1.85
CBX8-204ENST00000485449 RTL1A6NKG5 1358 aa26.63■■□□□ 1.85
CBX8-204ENST00000485449 PEAK1Q9H792 1746 aa26.63■■□□□ 1.85
CBX8-204ENST00000485449 AMPHP49418 695 aa26.63■■□□□ 1.85
CBX8-204ENST00000485449 FAM98CQ17RN3 349 aaKnown RBP26.63■■□□□ 1.85
CBX8-204ENST00000485449 HOXC9P31274 260 aa26.62■■□□□ 1.85
CBX8-204ENST00000485449 USP35Q9P2H5 1018 aa26.62■■□□□ 1.85
CBX8-204ENST00000485449 THSD7AQ9UPZ6 1657 aa26.62■■□□□ 1.85
CBX8-204ENST00000485449 CSB-PGBD3P0DP91 1061 aa26.61■■□□□ 1.85
CBX8-204ENST00000485449 TOM1L2Q6ZVM7 507 aa26.61■■□□□ 1.85
CBX8-204ENST00000485449 ERBB3P21860 1342 aa26.61■■□□□ 1.85
CBX8-204ENST00000485449 FAM208AQ9UK61 1670 aaKnown RBP26.6■■□□□ 1.85
CBX8-204ENST00000485449 KIF24Q5T7B8 1368 aa26.6■■□□□ 1.85
CBX8-204ENST00000485449 SEPT12Q8IYM1 358 aa26.6■■□□□ 1.85
CBX8-204ENST00000485449 SOCS7O14512 581 aa26.59■■□□□ 1.85
CBX8-204ENST00000485449 MORC1Q86VD1 984 aa26.59■■□□□ 1.85
CBX8-204ENST00000485449 TCP11L2Q8N4U5 519 aa26.59■■□□□ 1.85
CBX8-204ENST00000485449 ANKRD24Q8TF21 1146 aa26.59■■□□□ 1.85
CBX8-204ENST00000485449 THRAP3Q9Y2W1 955 aaKnown RBP26.59■■□□□ 1.85
CBX8-204ENST00000485449 WNK3Q9BYP7 1800 aa26.59■■□□□ 1.85
CBX8-204ENST00000485449 TNNT2P45379 298 aaPredicted RBP26.58■■□□□ 1.85
CBX8-204ENST00000485449 BARGINQ6ZT62 677 aa26.58■■□□□ 1.85
CBX8-204ENST00000485449 FLT4P35916 1363 aa26.58■■□□□ 1.84
CBX8-204ENST00000485449 CARD10Q9BWT7 1032 aa26.57■■□□□ 1.84
CBX8-204ENST00000485449 EMILIN1Q9Y6C2 1016 aa26.57■■□□□ 1.84
CBX8-204ENST00000485449 A0A0G2JS52 829 aa26.56■■□□□ 1.84
CBX8-204ENST00000485449 MYT1Q01538 1121 aa26.56■■□□□ 1.84
CBX8-204ENST00000485449 NPC1L1Q9UHC9 1359 aa26.56■■□□□ 1.84
CBX8-204ENST00000485449 POLKQ9UBT6 870 aa26.55■■□□□ 1.84
CBX8-204ENST00000485449 RGPD2P0DJD1 1756 aa26.54■■□□□ 1.84
CBX8-204ENST00000485449 LTV1Q96GA3 475 aaPredicted RBP26.54■■□□□ 1.84
CBX8-204ENST00000485449 INSRP06213 1382 aa26.54■■□□□ 1.84
CBX8-204ENST00000485449 PARP4Q9UKK3 1724 aaKnown RBP26.53■■□□□ 1.84
CBX8-204ENST00000485449 CC2D1BQ5T0F9 858 aaKnown RBP26.53■■□□□ 1.84
CBX8-204ENST00000485449 NLRP2Q9NX02 1062 aa26.53■■□□□ 1.84
CBX8-204ENST00000485449 PPM1GO15355 546 aaPredicted RBP26.52■■□□□ 1.84
CBX8-204ENST00000485449 HSP90AB2PQ58FF8 381 aa26.52■■□□□ 1.84
CBX8-204ENST00000485449 SMG6Q86US8 1419 aaKnown RBP26.5■■□□□ 1.83
CBX8-204ENST00000485449 KRT27Q7Z3Y8 459 aa26.49■■□□□ 1.83
CBX8-204ENST00000485449 LRRC37A3O60309 1634 aa26.47■■□□□ 1.83
CBX8-204ENST00000485449 CDCA7Q9BWT1 371 aaPredicted RBP26.47■■□□□ 1.83
CBX8-204ENST00000485449 DISP2A7MBM2 1401 aa26.47■■□□□ 1.83
CBX8-204ENST00000485449 CNGB1Q14028 1251 aaPredicted RBP26.45■■□□□ 1.82
CBX8-204ENST00000485449 EP400Q96L91 3159 aa26.44■■□□□ 1.82
CBX8-204ENST00000485449 DDX10Q13206 875 aaKnown RBP26.43■■□□□ 1.82
CBX8-204ENST00000485449 NBPF6Q5VWK0 638 aa26.42■■□□□ 1.82
CBX8-204ENST00000485449 NBPF4Q96M43 638 aa26.42■■□□□ 1.82
CBX8-204ENST00000485449 PDE3BQ13370 1112 aa26.41■■□□□ 1.82
CBX8-204ENST00000485449 IL2RBP14784 551 aa26.4■■□□□ 1.82
CBX8-204ENST00000485449 DDB1Q16531 1140 aa26.4■■□□□ 1.82
CBX8-204ENST00000485449 UPF1Q92900 1129 aaKnown RBP eCLIP26.4■■□□□ 1.82
CBX8-204ENST00000485449 MTHFSP49914 203 aa26.37■■□□□ 1.81
CBX8-204ENST00000485449 EIF4A2Q14240 407 aaKnown RBP26.37■■□□□ 1.81
CBX8-204ENST00000485449 FAM182BQ5T319 152 aa26.37■■□□□ 1.81
CBX8-204ENST00000485449 USHBP1Q8N6Y0 703 aa26.37■■□□□ 1.81
CBX8-204ENST00000485449 ZNF316A6NFI3 1004 aaPredicted RBP26.36■■□□□ 1.81
CBX8-204ENST00000485449 TNS2Q63HR2 1409 aa26.36■■□□□ 1.81
CBX8-204ENST00000485449 EXOC5O00471 708 aa26.35■■□□□ 1.81
CBX8-204ENST00000485449 NCAPD2Q15021 1401 aa26.35■■□□□ 1.81
CBX8-204ENST00000485449 EYA1Q99502 592 aa26.34■■□□□ 1.81
CBX8-204ENST00000485449 MEGF6O75095 1541 aa26.33■■□□□ 1.81
CBX8-204ENST00000485449 FAM196AQ6ZSG2 479 aa26.32■■□□□ 1.8
CBX8-204ENST00000485449 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
CBX8-204ENST00000485449 MARCH10Q8NA82 808 aaPredicted RBP26.3■■□□□ 1.8
CBX8-204ENST00000485449 RAPGEF4Q8WZA2 1011 aa26.3■■□□□ 1.8
CBX8-204ENST00000485449 SHANK3Q9BYB0 1731 aa26.3■■□□□ 1.8
CBX8-204ENST00000485449 PARD3Q8TEW0 1356 aa26.3■■□□□ 1.8
CBX8-204ENST00000485449 OVOS2A0A0G2JMS6 1433 aa26.3■■□□□ 1.8
CBX8-204ENST00000485449 CCDC125Q86Z20 511 aa26.29■■□□□ 1.8
CBX8-204ENST00000485449 SBF2Q86WG5 1849 aa26.28■■□□□ 1.8
CBX8-204ENST00000485449 PPP2R1AP30153 589 aa26.28■■□□□ 1.8
CBX8-204ENST00000485449 IL13P35225 146 aa26.28■■□□□ 1.8
CBX8-204ENST00000485449 IGSF1Q8N6C5 1336 aa26.28■■□□□ 1.8
CBX8-204ENST00000485449 TATP17735 454 aaPredicted RBP26.27■■□□□ 1.8
CBX8-204ENST00000485449 COL3A1P02461 1466 aaPredicted RBP26.26■■□□□ 1.79
CBX8-204ENST00000485449 PKD1L3Q7Z443 1732 aa26.25■■□□□ 1.79
CBX8-204ENST00000485449 TNS1Q9HBL0 1735 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms