RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 CRB1P82279 1406 aa23.94■■□□□ 1.42
PLD3-211ENST00000485448 C11orf95C9JLR9 678 aaPredicted RBP23.93■■□□□ 1.42
PLD3-211ENST00000485448 SF3B2Q13435 895 aaKnown RBP23.93■■□□□ 1.42
PLD3-211ENST00000485448 ZRANB1Q9UGI0 708 aa23.93■■□□□ 1.42
PLD3-211ENST00000485448 COL5A2P05997 1499 aaPredicted RBP23.93■■□□□ 1.42
PLD3-211ENST00000485448 CDCA7Q9BWT1 371 aaPredicted RBP23.92■■□□□ 1.42
PLD3-211ENST00000485448 AXIN2Q9Y2T1 843 aa23.92■■□□□ 1.42
PLD3-211ENST00000485448 WDR17Q8IZU2 1322 aa23.92■■□□□ 1.42
PLD3-211ENST00000485448 LMO7Q8WWI1 1683 aa23.92■■□□□ 1.42
PLD3-211ENST00000485448 CSB-PGBD3P0DP91 1061 aa23.91■■□□□ 1.42
PLD3-211ENST00000485448 PDE3BQ13370 1112 aa23.91■■□□□ 1.42
PLD3-211ENST00000485448 FYB1O15117 783 aa23.9■■□□□ 1.42
PLD3-211ENST00000485448 ABCC6O95255 1503 aa23.89■■□□□ 1.41
PLD3-211ENST00000485448 OVOS2A0A0J9YW53 1432 aa23.88■■□□□ 1.41
PLD3-211ENST00000485448 OVOS2Q6IE36 1432 aa23.88■■□□□ 1.41
PLD3-211ENST00000485448 CARD10Q9BWT7 1032 aa23.88■■□□□ 1.41
PLD3-211ENST00000485448 BLMP54132 1417 aaPredicted RBP23.87■■□□□ 1.41
PLD3-211ENST00000485448 NFAT5O94916 1531 aa23.87■■□□□ 1.41
PLD3-211ENST00000485448 FAM196AQ6ZSG2 479 aa23.86■■□□□ 1.41
PLD3-211ENST00000485448 POLR3GLQ9BT43 218 aa23.86■■□□□ 1.41
PLD3-211ENST00000485448 USP54Q70EL1 1684 aa23.86■■□□□ 1.41
PLD3-211ENST00000485448 IP6K1Q92551 441 aa23.85■■□□□ 1.41
PLD3-211ENST00000485448 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
PLD3-211ENST00000485448 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.41
PLD3-211ENST00000485448 CCDC7Q96M83 1385 aa23.83■■□□□ 1.41
PLD3-211ENST00000485448 AMPHP49418 695 aa23.83■■□□□ 1.4
PLD3-211ENST00000485448 GGNBP2Q9H3C7 697 aa23.83■■□□□ 1.4
PLD3-211ENST00000485448 ERBB3P21860 1342 aa23.82■■□□□ 1.4
PLD3-211ENST00000485448 COL18A1P39060 1754 aa23.81■■□□□ 1.4
PLD3-211ENST00000485448 DDB1Q16531 1140 aa23.81■■□□□ 1.4
PLD3-211ENST00000485448 THSD7AQ9UPZ6 1657 aa23.81■■□□□ 1.4
PLD3-211ENST00000485448 ANKRD24Q8TF21 1146 aa23.8■■□□□ 1.4
PLD3-211ENST00000485448 NLRP2Q9NX02 1062 aa23.8■■□□□ 1.4
PLD3-211ENST00000485448 EXOC5O00471 708 aa23.79■■□□□ 1.4
PLD3-211ENST00000485448 BRWD3Q6RI45 1802 aa23.78■■□□□ 1.4
PLD3-211ENST00000485448 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
PLD3-211ENST00000485448 BAG6P46379 1132 aa23.78■■□□□ 1.4
PLD3-211ENST00000485448 NSD3Q9BZ95 1437 aa23.77■■□□□ 1.4
PLD3-211ENST00000485448 KIF24Q5T7B8 1368 aa23.77■■□□□ 1.4
PLD3-211ENST00000485448 HOXC9P31274 260 aa23.76■■□□□ 1.39
PLD3-211ENST00000485448 PANK3Q9H999 370 aa23.76■■□□□ 1.39
PLD3-211ENST00000485448 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
PLD3-211ENST00000485448 FAM182BQ5T319 152 aa23.73■■□□□ 1.39
PLD3-211ENST00000485448 IL2RBP14784 551 aa23.72■■□□□ 1.39
PLD3-211ENST00000485448 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
PLD3-211ENST00000485448 KNSTRNQ9Y448 316 aa23.71■■□□□ 1.39
PLD3-211ENST00000485448 TRIM37O94972 964 aa23.69■■□□□ 1.38
PLD3-211ENST00000485448 FBLN1P23142 703 aa23.69■■□□□ 1.38
PLD3-211ENST00000485448 LTV1Q96GA3 475 aaPredicted RBP23.69■■□□□ 1.38
PLD3-211ENST00000485448 MYOM1P52179 1685 aa23.69■■□□□ 1.38
PLD3-211ENST00000485448 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
PLD3-211ENST00000485448 EP400Q96L91 3159 aa23.68■■□□□ 1.38
PLD3-211ENST00000485448 NSD2O96028 1365 aa23.68■■□□□ 1.38
PLD3-211ENST00000485448 LTN1O94822 1766 aa23.68■■□□□ 1.38
PLD3-211ENST00000485448 PARP4Q9UKK3 1724 aaKnown RBP23.68■■□□□ 1.38
PLD3-211ENST00000485448 OVOS2A0A0G2JMS6 1433 aa23.68■■□□□ 1.38
PLD3-211ENST00000485448 FLT4P35916 1363 aa23.67■■□□□ 1.38
PLD3-211ENST00000485448 DEFB132Q7Z7B7 95 aa23.67■■□□□ 1.38
PLD3-211ENST00000485448 KIF7Q2M1P5 1343 aa23.67■■□□□ 1.38
PLD3-211ENST00000485448 INSRP06213 1382 aa23.66■■□□□ 1.38
PLD3-211ENST00000485448 APBA3O96018 575 aa23.66■■□□□ 1.38
PLD3-211ENST00000485448 DISP2A7MBM2 1401 aa23.66■■□□□ 1.38
PLD3-211ENST00000485448 RGPD5Q99666 1765 aa23.65■■□□□ 1.38
PLD3-211ENST00000485448 BCL9O00512 1426 aa23.65■■□□□ 1.38
PLD3-211ENST00000485448 PARD3Q8TEW0 1356 aa23.64■■□□□ 1.37
PLD3-211ENST00000485448 MARCH10Q8NA82 808 aaPredicted RBP23.63■■□□□ 1.37
PLD3-211ENST00000485448 WASHC2AQ641Q2 1341 aa23.63■■□□□ 1.37
PLD3-211ENST00000485448 PPM1GO15355 546 aaPredicted RBP23.62■■□□□ 1.37
PLD3-211ENST00000485448 HSP90AB2PQ58FF8 381 aa23.62■■□□□ 1.37
PLD3-211ENST00000485448 BCL11BQ9C0K0 894 aaPredicted RBP23.62■■□□□ 1.37
PLD3-211ENST00000485448 KIF20BQ96Q89 1820 aa23.62■■□□□ 1.37
PLD3-211ENST00000485448 EN1Q05925 392 aaPredicted RBP23.61■■□□□ 1.37
PLD3-211ENST00000485448 MORC1Q86VD1 984 aa23.61■■□□□ 1.37
PLD3-211ENST00000485448 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
PLD3-211ENST00000485448 RAPGEF4Q8WZA2 1011 aa23.6■■□□□ 1.37
PLD3-211ENST00000485448 POLKQ9UBT6 870 aa23.59■■□□□ 1.37
PLD3-211ENST00000485448 EMILIN1Q9Y6C2 1016 aa23.59■■□□□ 1.37
PLD3-211ENST00000485448 TNS2Q63HR2 1409 aa23.59■■□□□ 1.37
PLD3-211ENST00000485448 FAM208AQ9UK61 1670 aaKnown RBP23.59■■□□□ 1.37
PLD3-211ENST00000485448 PLSCR1O15162 318 aa23.59■■□□□ 1.37
PLD3-211ENST00000485448 NBPF6Q5VWK0 638 aa23.59■■□□□ 1.37
PLD3-211ENST00000485448 NBPF4Q96M43 638 aa23.59■■□□□ 1.37
PLD3-211ENST00000485448 CAMKK2Q96RR4 588 aa23.59■■□□□ 1.37
PLD3-211ENST00000485448 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
PLD3-211ENST00000485448 LRRC37A3O60309 1634 aa23.56■■□□□ 1.36
PLD3-211ENST00000485448 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
PLD3-211ENST00000485448 TNNT2P45379 298 aaPredicted RBP23.56■■□□□ 1.36
PLD3-211ENST00000485448 EZH2Q15910 746 aaKnown RBP23.55■■□□□ 1.36
PLD3-211ENST00000485448 PER1O15534 1290 aaPredicted RBP23.54■■□□□ 1.36
PLD3-211ENST00000485448 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
PLD3-211ENST00000485448 DDX54Q8TDD1 881 aaKnown RBP23.54■■□□□ 1.36
PLD3-211ENST00000485448 NBPF14Q5TI25 921 aa23.53■■□□□ 1.36
PLD3-211ENST00000485448 WNK3Q9BYP7 1800 aa23.52■■□□□ 1.36
PLD3-211ENST00000485448 PEAK1Q9H792 1746 aa23.49■■□□□ 1.35
PLD3-211ENST00000485448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.48■■□□□ 1.35
PLD3-211ENST00000485448 NPC1L1Q9UHC9 1359 aa23.48■■□□□ 1.35
PLD3-211ENST00000485448 USHBP1Q8N6Y0 703 aa23.47■■□□□ 1.35
PLD3-211ENST00000485448 SPG7Q9UQ90 795 aa23.47■■□□□ 1.35
PLD3-211ENST00000485448 EYA1Q99502 592 aa23.46■■□□□ 1.35
PLD3-211ENST00000485448 TNS1Q9HBL0 1735 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms