RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	CARD14	Q9BXL6	1004 aa		10.3	□□□□□ -0.76
SFPQ-208	ENST00000485365	ADAMTS8	Q9UP79	889 aa		10.3	□□□□□ -0.76
SFPQ-208	ENST00000485365	FIGNL2	A6NMB9	653 aa		10.29	□□□□□ -0.76
SFPQ-208	ENST00000485365	ERFE	Q4G0M1	354 aa		10.29	□□□□□ -0.76
SFPQ-208	ENST00000485365	RTL5	Q5HYW3	569 aa	Predicted RBP	10.29	□□□□□ -0.76
SFPQ-208	ENST00000485365	HELB	Q8NG08	1087 aa	Predicted RBP	10.29	□□□□□ -0.76
SFPQ-208	ENST00000485365	NANOS1	Q8WY41	292 aa	Known RBP	10.29	□□□□□ -0.76
SFPQ-208	ENST00000485365	AK7	Q96M32	723 aa		10.29	□□□□□ -0.76
SFPQ-208	ENST00000485365	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.29	□□□□□ -0.76
SFPQ-208	ENST00000485365	GDF11	O95390	407 aa		10.28	□□□□□ -0.76
SFPQ-208	ENST00000485365	CBLB	Q13191	982 aa		10.28	□□□□□ -0.76
SFPQ-208	ENST00000485365	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.28	□□□□□ -0.76
SFPQ-208	ENST00000485365		Q6ZVU0	165 aa		10.28	□□□□□ -0.76
SFPQ-208	ENST00000485365	SPINT1	O43278	529 aa		10.27	□□□□□ -0.77
SFPQ-208	ENST00000485365	RNFT1	Q5M7Z0	435 aa		10.27	□□□□□ -0.77
SFPQ-208	ENST00000485365	CCDC155	Q8N6L0	562 aa		10.27	□□□□□ -0.77
SFPQ-208	ENST00000485365	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.27	□□□□□ -0.77
SFPQ-208	ENST00000485365	RNF225	M0QZC1	329 aa	Predicted RBP	10.26	□□□□□ -0.77
SFPQ-208	ENST00000485365	ZNF385C	Q66K41	422 aa	Predicted RBP	10.26	□□□□□ -0.77
SFPQ-208	ENST00000485365	PGPEP1	Q9NXJ5	209 aa		10.25	□□□□□ -0.77
SFPQ-208	ENST00000485365	SLC35F4	A4IF30	521 aa		10.24	□□□□□ -0.77
SFPQ-208	ENST00000485365	CLK2	P49760	499 aa	Known RBP	10.22	□□□□□ -0.77
SFPQ-208	ENST00000485365	PDE4D	Q08499	809 aa		10.22	□□□□□ -0.77
SFPQ-208	ENST00000485365	SVOP	Q8N4V2	548 aa		10.22	□□□□□ -0.77
SFPQ-208	ENST00000485365	WHAMM	Q8TF30	809 aa		10.22	□□□□□ -0.77
SFPQ-208	ENST00000485365	SLURP2	P0DP57	97 aa		10.21	□□□□□ -0.77
SFPQ-208	ENST00000485365	ITGA6	P23229	1130 aa		10.21	□□□□□ -0.77
SFPQ-208	ENST00000485365	KCTD15	Q96SI1	283 aa	Predicted RBP	10.21	□□□□□ -0.77
SFPQ-208	ENST00000485365	CTSO	P43234	321 aa	Predicted RBP	10.2	□□□□□ -0.78
SFPQ-208	ENST00000485365	PDXDC2P	Q6P474	469 aa		10.2	□□□□□ -0.78
SFPQ-208	ENST00000485365	VWA5B2	Q8N398	1253 aa		10.2	□□□□□ -0.78
SFPQ-208	ENST00000485365	AGBL1	Q96MI9	1066 aa		10.2	□□□□□ -0.78
SFPQ-208	ENST00000485365	ARHGAP9	Q9BRR9	750 aa		10.2	□□□□□ -0.78
SFPQ-208	ENST00000485365	ARHGEF15	O94989	841 aa		10.19	□□□□□ -0.78
SFPQ-208	ENST00000485365	CTDSPL2	Q05D32	466 aa		10.19	□□□□□ -0.78
SFPQ-208	ENST00000485365	SLC10A4	Q96EP9	437 aa		10.19	□□□□□ -0.78
SFPQ-208	ENST00000485365	INSM2	Q96T92	566 aa	Predicted RBP	10.18	□□□□□ -0.78
SFPQ-208	ENST00000485365	CDV3	Q9UKY7	258 aa	Known RBP	10.18	□□□□□ -0.78
SFPQ-208	ENST00000485365	CDC14C	A4D256	554 aa		10.17	□□□□□ -0.78
SFPQ-208	ENST00000485365	RELB	Q01201	579 aa		10.17	□□□□□ -0.78
SFPQ-208	ENST00000485365	DHX9	Q08211	1270 aa	Known RBP	10.17	□□□□□ -0.78
SFPQ-208	ENST00000485365	SV2A	Q7L0J3	742 aa		10.17	□□□□□ -0.78
SFPQ-208	ENST00000485365	FKBPL	Q9UIM3	349 aa		10.17	□□□□□ -0.78
SFPQ-208	ENST00000485365	IRS1	P35568	1242 aa		10.16	□□□□□ -0.78
SFPQ-208	ENST00000485365	INTS6L	Q5JSJ4	861 aa	Known RBP	10.16	□□□□□ -0.78
SFPQ-208	ENST00000485365	RNF217	Q8TC41	542 aa		10.16	□□□□□ -0.78
SFPQ-208	ENST00000485365	POLR3E	Q9NVU0	708 aa		10.16	□□□□□ -0.78
SFPQ-208	ENST00000485365	SENP3-EIF4A1	A0A087X0R7	540 aa		10.15	□□□□□ -0.78
SFPQ-208	ENST00000485365	LRRN4	Q8WUT4	740 aa		10.15	□□□□□ -0.78
SFPQ-208	ENST00000485365	OCSTAMP	Q9BR26	566 aa		10.15	□□□□□ -0.78
SFPQ-208	ENST00000485365	ZBTB33	Q86T24	672 aa		10.14	□□□□□ -0.79
SFPQ-208	ENST00000485365	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.14	□□□□□ -0.79
SFPQ-208	ENST00000485365	RSPH6A	Q9H0K4	717 aa		10.13	□□□□□ -0.79
SFPQ-208	ENST00000485365	POLM	Q9NP87	494 aa	Predicted RBP	10.13	□□□□□ -0.79
SFPQ-208	ENST00000485365	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.12	□□□□□ -0.79
SFPQ-208	ENST00000485365	GPAT2	Q6NUI2	795 aa		10.12	□□□□□ -0.79
SFPQ-208	ENST00000485365	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.12	□□□□□ -0.79
SFPQ-208	ENST00000485365	NR6A1	Q15406	480 aa		10.11	□□□□□ -0.79
SFPQ-208	ENST00000485365	ADAMTS2	O95450	1211 aa		10.1	□□□□□ -0.79
SFPQ-208	ENST00000485365	MARS	P56192	900 aa	Known RBP	10.1	□□□□□ -0.79
SFPQ-208	ENST00000485365	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.1	□□□□□ -0.79
SFPQ-208	ENST00000485365	KANK3	Q6NY19	840 aa		10.1	□□□□□ -0.79
SFPQ-208	ENST00000485365	TMPRSS4	Q9NRS4	437 aa		10.1	□□□□□ -0.79
SFPQ-208	ENST00000485365	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.09	□□□□□ -0.79
SFPQ-208	ENST00000485365	LYPD4	Q6UWN0	246 aa		10.09	□□□□□ -0.79
SFPQ-208	ENST00000485365	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.09	□□□□□ -0.79
SFPQ-208	ENST00000485365	ADAM32	Q8TC27	787 aa		10.09	□□□□□ -0.79
SFPQ-208	ENST00000485365	IGHA1	P01876	353 aa		10.08	□□□□□ -0.8
SFPQ-208	ENST00000485365	ADH1A	P07327	375 aa		10.08	□□□□□ -0.8
SFPQ-208	ENST00000485365	PTK2	Q05397	1052 aa		10.08	□□□□□ -0.8
SFPQ-208	ENST00000485365	GAS6	Q14393	721 aa		10.08	□□□□□ -0.8
SFPQ-208	ENST00000485365	SLC24A3	Q9HC58	644 aa		10.08	□□□□□ -0.8
SFPQ-208	ENST00000485365	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.08	□□□□□ -0.8
SFPQ-208	ENST00000485365	KDF1	Q8NAX2	398 aa	Predicted RBP	10.07	□□□□□ -0.8
SFPQ-208	ENST00000485365	SCARF2	Q96GP6	870 aa	Predicted RBP	10.07	□□□□□ -0.8
SFPQ-208	ENST00000485365	GPSM3	Q9Y4H4	160 aa		10.07	□□□□□ -0.8
SFPQ-208	ENST00000485365	LILRA1	O75019	489 aa		10.06	□□□□□ -0.8
SFPQ-208	ENST00000485365	ADD1	P35611	737 aa	Known RBP	10.06	□□□□□ -0.8
SFPQ-208	ENST00000485365	SRSF11	Q05519	484 aa	Known RBP	10.06	□□□□□ -0.8
SFPQ-208	ENST00000485365	NBPF20	Q3BBV1	942 aa		10.06	□□□□□ -0.8
SFPQ-208	ENST00000485365	PTGIR	P43119	386 aa		10.05	□□□□□ -0.8
SFPQ-208	ENST00000485365	RAB15	P59190	212 aa		10.05	□□□□□ -0.8
SFPQ-208	ENST00000485365	FOXK2	Q01167	660 aa		10.05	□□□□□ -0.8
SFPQ-208	ENST00000485365	ERVH48-1	M5A8F1	160 aa		10.04	□□□□□ -0.8
SFPQ-208	ENST00000485365	CELA2B	P08218	269 aa	Predicted RBP	10.04	□□□□□ -0.8
SFPQ-208	ENST00000485365	MAP3K10	Q02779	954 aa		10.03	□□□□□ -0.8
SFPQ-208	ENST00000485365	LYSMD3	Q7Z3D4	306 aa		10.03	□□□□□ -0.8
SFPQ-208	ENST00000485365	EPS8L1	Q8TE68	723 aa		10.02	□□□□□ -0.81
SFPQ-208	ENST00000485365	SKIV2L	Q15477	1246 aa	Known RBP	10.01	□□□□□ -0.81
SFPQ-208	ENST00000485365	PPP2R2D	Q66LE6	453 aa		10.01	□□□□□ -0.81
SFPQ-208	ENST00000485365	ESPN	B1AK53	854 aa		10	□□□□□ -0.81
SFPQ-208	ENST00000485365	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10	□□□□□ -0.81
SFPQ-208	ENST00000485365	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10	□□□□□ -0.81
SFPQ-208	ENST00000485365	DZIP3	Q86Y13	1208 aa	Known RBP	9.99	□□□□□ -0.81
SFPQ-208	ENST00000485365	ZNF837	Q96EG3	531 aa	Predicted RBP	9.99	□□□□□ -0.81
SFPQ-208	ENST00000485365	AP1G2	O75843	785 aa		9.98	□□□□□ -0.81
SFPQ-208	ENST00000485365	RHOQ	P17081	205 aa		9.98	□□□□□ -0.81
SFPQ-208	ENST00000485365	SH3D19	Q5HYK7	790 aa		9.98	□□□□□ -0.81
SFPQ-208	ENST00000485365	PRICKLE2	Q7Z3G6	844 aa		9.98	□□□□□ -0.81
SFPQ-208	ENST00000485365	HMX1	Q9NP08	348 aa	Predicted RBP	9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms