RNA–Protein interactions for RNA: ENST00000485194.1

ATP13A3-208, Transcript of ATPase 13A3, humanhuman

TSL 5

Gene ATP13A3, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-208ENST00000485194 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
ATP13A3-208ENST00000485194 FOXC1Q12948 553 aa9.48□□□□□ -0.89
ATP13A3-208ENST00000485194 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
ATP13A3-208ENST00000485194 TBC1D9Q6ZT07 1266 aa9.48□□□□□ -0.89
ATP13A3-208ENST00000485194 HOMEZQ8IX15 550 aa9.48□□□□□ -0.89
ATP13A3-208ENST00000485194 TRMT44Q8IYL2 757 aaKnown RBP9.48□□□□□ -0.89
ATP13A3-208ENST00000485194 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
ATP13A3-208ENST00000485194 PIK3CDO00329 1044 aa9.47□□□□□ -0.89
ATP13A3-208ENST00000485194 EMID1Q96A84 441 aaPredicted RBP9.47□□□□□ -0.89
ATP13A3-208ENST00000485194 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
ATP13A3-208ENST00000485194 GFRA3O60609 400 aa9.46□□□□□ -0.9
ATP13A3-208ENST00000485194 ZNF598Q86UK7 904 aaKnown RBP9.46□□□□□ -0.9
ATP13A3-208ENST00000485194 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.9
ATP13A3-208ENST00000485194 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
ATP13A3-208ENST00000485194 WNT7AO00755 349 aa9.45□□□□□ -0.9
ATP13A3-208ENST00000485194 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
ATP13A3-208ENST00000485194 MRGPRX2Q96LB1 330 aa9.45□□□□□ -0.9
ATP13A3-208ENST00000485194 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
ATP13A3-208ENST00000485194 TLL2Q9Y6L7 1015 aa9.45□□□□□ -0.9
ATP13A3-208ENST00000485194 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
ATP13A3-208ENST00000485194 PLPP7Q8NBV4 271 aa9.44□□□□□ -0.9
ATP13A3-208ENST00000485194 ESF1Q9H501 851 aaKnown RBP9.44□□□□□ -0.9
ATP13A3-208ENST00000485194 MAFBQ9Y5Q3 323 aaPredicted RBP9.44□□□□□ -0.9
ATP13A3-208ENST00000485194 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 USP17L5A8MUK1 530 aa9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 MAP7D1Q3KQU3 841 aa9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 CDCA8Q53HL2 280 aa9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 DEPDC4Q8N2C3 294 aa9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 MAP4K5Q9Y4K4 846 aa9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 PCDHB11Q9Y5F2 797 aa9.43□□□□□ -0.9
ATP13A3-208ENST00000485194 USP17L3A6NCW0 530 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 USP17L4A6NCW7 530 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 FSHRP23945 695 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 EML3Q32P44 896 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 USP17L2Q6R6M4 530 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 USP17L1Q7RTZ2 530 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 PHTF2Q8N3S3 785 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 PBXIP1Q96AQ6 731 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 VRTNQ9H8Y1 702 aa9.42□□□□□ -0.9
ATP13A3-208ENST00000485194 CCDC125Q86Z20 511 aa9.41□□□□□ -0.9
ATP13A3-208ENST00000485194 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
ATP13A3-208ENST00000485194 TTC24A2A3L6 582 aaPredicted RBP9.4□□□□□ -0.9
ATP13A3-208ENST00000485194 LZTS3O60299 673 aaPredicted RBP9.4□□□□□ -0.9
ATP13A3-208ENST00000485194 ALDH1A1P00352 501 aa9.4□□□□□ -0.9
ATP13A3-208ENST00000485194 DHX9Q08211 1270 aaKnown RBP9.4□□□□□ -0.9
ATP13A3-208ENST00000485194 NCOA4Q13772 614 aa9.4□□□□□ -0.9
ATP13A3-208ENST00000485194 CDK15Q96Q40 435 aa9.4□□□□□ -0.9
ATP13A3-208ENST00000485194 ESPNB1AK53 854 aa9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 SIAH2O43255 324 aa9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 ADH1CP00326 375 aa9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 INTS6LQ5JSJ4 861 aaKnown RBP9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 PLEKHM2Q8IWE5 1019 aa9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 CYP4X1Q8N118 509 aa9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 SIRT1Q96EB6 747 aa9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 CCDC85AQ96PX6 553 aaPredicted RBP9.39□□□□□ -0.91
ATP13A3-208ENST00000485194 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
ATP13A3-208ENST00000485194 NR5A1Q13285 461 aa9.38□□□□□ -0.91
ATP13A3-208ENST00000485194 MPNDQ8N594 471 aa9.38□□□□□ -0.91
ATP13A3-208ENST00000485194 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
ATP13A3-208ENST00000485194 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
ATP13A3-208ENST00000485194 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
ATP13A3-208ENST00000485194 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
ATP13A3-208ENST00000485194 USP4Q13107 963 aa9.37□□□□□ -0.91
ATP13A3-208ENST00000485194 LARP1Q6PKG0 1096 aaKnown RBP9.37□□□□□ -0.91
ATP13A3-208ENST00000485194 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
ATP13A3-208ENST00000485194 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
ATP13A3-208ENST00000485194 GRM5P41594 1212 aa9.36□□□□□ -0.91
ATP13A3-208ENST00000485194 TRIM50Q86XT4 487 aa9.36□□□□□ -0.91
ATP13A3-208ENST00000485194 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
ATP13A3-208ENST00000485194 PKD2L1Q9P0L9 805 aa9.36□□□□□ -0.91
ATP13A3-208ENST00000485194 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
ATP13A3-208ENST00000485194 RASA1P20936 1047 aa9.35□□□□□ -0.91
ATP13A3-208ENST00000485194 PSME1Q06323 249 aa9.35□□□□□ -0.91
ATP13A3-208ENST00000485194 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
ATP13A3-208ENST00000485194 RBM19Q9Y4C8 960 aaKnown RBP9.35□□□□□ -0.91
ATP13A3-208ENST00000485194 ATP1A2P50993 1020 aa9.34□□□□□ -0.91
ATP13A3-208ENST00000485194 NNTQ13423 1086 aa9.34□□□□□ -0.91
ATP13A3-208ENST00000485194 ZNF787Q6DD87 383 aa9.34□□□□□ -0.91
ATP13A3-208ENST00000485194 TMPRSS4Q9NRS4 437 aa9.34□□□□□ -0.91
ATP13A3-208ENST00000485194 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
ATP13A3-208ENST00000485194 CHIC2Q9UKJ5 165 aa9.34□□□□□ -0.91
ATP13A3-208ENST00000485194 GDF9O60383 454 aa9.33□□□□□ -0.92
ATP13A3-208ENST00000485194 KANK4Q5T7N3 995 aaPredicted RBP9.33□□□□□ -0.92
ATP13A3-208ENST00000485194 PPP1R26Q5T8A7 1209 aaPredicted RBP9.33□□□□□ -0.92
ATP13A3-208ENST00000485194 CYLDQ9NQC7 956 aa9.33□□□□□ -0.92
ATP13A3-208ENST00000485194 NRG2O14511 850 aaPredicted RBP9.32□□□□□ -0.92
ATP13A3-208ENST00000485194 MYT1Q01538 1121 aa9.32□□□□□ -0.92
ATP13A3-208ENST00000485194 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
ATP13A3-208ENST00000485194 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
ATP13A3-208ENST00000485194 J3QL48 77 aa9.31□□□□□ -0.92
ATP13A3-208ENST00000485194 NR3C2P08235 984 aa9.31□□□□□ -0.92
ATP13A3-208ENST00000485194 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
ATP13A3-208ENST00000485194 GTF2IP78347 998 aa9.31□□□□□ -0.92
ATP13A3-208ENST00000485194 PDE4CQ08493 712 aa9.31□□□□□ -0.92
ATP13A3-208ENST00000485194 OGFOD1Q8N543 542 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms