RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
NEB-213ENST00000484968 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
NEB-213ENST00000484968 LTN1O94822 1766 aa12.64□□□□□ -0.39
NEB-213ENST00000484968 IL13P35225 146 aa12.64□□□□□ -0.39
NEB-213ENST00000484968 AMPHP49418 695 aa12.64□□□□□ -0.39
NEB-213ENST00000484968 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
NEB-213ENST00000484968 PNISRQ8TF01 805 aaKnown RBP12.64□□□□□ -0.39
NEB-213ENST00000484968 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
NEB-213ENST00000484968 FLT4P35916 1363 aa12.64□□□□□ -0.39
NEB-213ENST00000484968 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
NEB-213ENST00000484968 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
NEB-213ENST00000484968 RTL1A6NKG5 1358 aa12.62□□□□□ -0.39
NEB-213ENST00000484968 KIF24Q5T7B8 1368 aa12.62□□□□□ -0.39
NEB-213ENST00000484968 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
NEB-213ENST00000484968 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
NEB-213ENST00000484968 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
NEB-213ENST00000484968 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
NEB-213ENST00000484968 SLIT2O94813 1529 aa12.61□□□□□ -0.39
NEB-213ENST00000484968 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
NEB-213ENST00000484968 NBPF6Q5VWK0 638 aa12.6□□□□□ -0.39
NEB-213ENST00000484968 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
NEB-213ENST00000484968 NBPF4Q96M43 638 aa12.6□□□□□ -0.39
NEB-213ENST00000484968 RGPD5Q99666 1765 aa12.6□□□□□ -0.39
NEB-213ENST00000484968 BLMP54132 1417 aaPredicted RBP12.6□□□□□ -0.39
NEB-213ENST00000484968 ERBB3P21860 1342 aa12.6□□□□□ -0.39
NEB-213ENST00000484968 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
NEB-213ENST00000484968 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
NEB-213ENST00000484968 LARP1Q6PKG0 1096 aaKnown RBP12.59□□□□□ -0.39
NEB-213ENST00000484968 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
NEB-213ENST00000484968 FNBP4Q8N3X1 1017 aaPredicted RBP12.59□□□□□ -0.39
NEB-213ENST00000484968 C8orf37Q96NL8 207 aa12.59□□□□□ -0.39
NEB-213ENST00000484968 EYA1Q99502 592 aa12.59□□□□□ -0.39
NEB-213ENST00000484968 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
NEB-213ENST00000484968 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.39
NEB-213ENST00000484968 ABCC6O95255 1503 aa12.58□□□□□ -0.4
NEB-213ENST00000484968 RGPD1P0DJD0 1748 aa12.58□□□□□ -0.4
NEB-213ENST00000484968 USHBP1Q8N6Y0 703 aa12.58□□□□□ -0.4
NEB-213ENST00000484968 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
NEB-213ENST00000484968 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
NEB-213ENST00000484968 IGSF1Q8N6C5 1336 aa12.57□□□□□ -0.4
NEB-213ENST00000484968 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
NEB-213ENST00000484968 NCAPD2Q15021 1401 aa12.56□□□□□ -0.4
NEB-213ENST00000484968 NGLY1Q96IV0 654 aa12.56□□□□□ -0.4
NEB-213ENST00000484968 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
NEB-213ENST00000484968 WDR17Q8IZU2 1322 aa12.56□□□□□ -0.4
NEB-213ENST00000484968 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
NEB-213ENST00000484968 SENP3-EIF4A1A0A087X0R7 540 aa12.55□□□□□ -0.4
NEB-213ENST00000484968 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
NEB-213ENST00000484968 HMOX1P09601 288 aa12.55□□□□□ -0.4
NEB-213ENST00000484968 FAM9BQ8IZU0 186 aa12.55□□□□□ -0.4
NEB-213ENST00000484968 RGS17Q9UGC6 210 aaPredicted RBP12.55□□□□□ -0.4
NEB-213ENST00000484968 AFF2P51816 1311 aa12.55□□□□□ -0.4
NEB-213ENST00000484968 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
NEB-213ENST00000484968 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.4
NEB-213ENST00000484968 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
NEB-213ENST00000484968 PLEKHF1Q96S99 279 aa12.54□□□□□ -0.4
NEB-213ENST00000484968 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
NEB-213ENST00000484968 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
NEB-213ENST00000484968 KDRP35968 1356 aa12.54□□□□□ -0.4
NEB-213ENST00000484968 UNC5CLQ8IV45 518 aa12.53□□□□□ -0.4
NEB-213ENST00000484968 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
NEB-213ENST00000484968 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
NEB-213ENST00000484968 MEX3CQ5U5Q3 659 aaKnown RBP12.52□□□□□ -0.41
NEB-213ENST00000484968 CCDC146Q8IYE0 955 aa12.52□□□□□ -0.41
NEB-213ENST00000484968 USP21Q9UK80 565 aa12.52□□□□□ -0.41
NEB-213ENST00000484968 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 CSB-PGBD3P0DP91 1061 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 EVA1CP58658 441 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 CARD10Q9BWT7 1032 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 CRB1P82279 1406 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 MEGF6O75095 1541 aa12.51□□□□□ -0.41
NEB-213ENST00000484968 FCHSD2O94868 740 aa12.5□□□□□ -0.41
NEB-213ENST00000484968 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
NEB-213ENST00000484968 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEB-213ENST00000484968 VPS72Q15906 364 aa12.5□□□□□ -0.41
NEB-213ENST00000484968 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
NEB-213ENST00000484968 NUDCQ9Y266 331 aa12.5□□□□□ -0.41
NEB-213ENST00000484968 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
NEB-213ENST00000484968 DISP2A7MBM2 1401 aa12.49□□□□□ -0.41
NEB-213ENST00000484968 ATRNO75882 1429 aa12.49□□□□□ -0.41
NEB-213ENST00000484968 GLI3P10071 1580 aa12.48□□□□□ -0.41
NEB-213ENST00000484968 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
NEB-213ENST00000484968 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.47□□□□□ -0.41
NEB-213ENST00000484968 APAF1O14727 1248 aa12.46□□□□□ -0.41
NEB-213ENST00000484968 MTHFSDQ2M296 383 aaKnown RBP12.46□□□□□ -0.41
NEB-213ENST00000484968 POTEAQ6S8J7 498 aa12.46□□□□□ -0.41
NEB-213ENST00000484968 GJD4Q96KN9 370 aaPredicted RBP12.46□□□□□ -0.41
NEB-213ENST00000484968 RRP7AQ9Y3A4 280 aaKnown RBP12.46□□□□□ -0.41
NEB-213ENST00000484968 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
NEB-213ENST00000484968 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
NEB-213ENST00000484968 PHF23Q9BUL5 403 aaPredicted RBP12.45□□□□□ -0.42
NEB-213ENST00000484968 OVOS2A0A0G2JMS6 1433 aa12.45□□□□□ -0.42
NEB-213ENST00000484968 ONECUT3O60422 494 aaPredicted RBP12.44□□□□□ -0.42
NEB-213ENST00000484968 IL2RBP14784 551 aa12.44□□□□□ -0.42
NEB-213ENST00000484968 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
NEB-213ENST00000484968 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
NEB-213ENST00000484968 TRPC5Q9UL62 973 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms